RNA–Protein interactions for RNA: ENST00000428352.5

ATP13A4-205, Transcript of ATPase 13A4, humanhuman

TSL 2

Gene ATP13A4, Length 3,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4-205ENST00000428352 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
ATP13A4-205ENST00000428352 NISCHQ9Y2I1 1504 aa11.67□□□□□ -0.54
ATP13A4-205ENST00000428352 MYT1Q01538 1121 aa11.59□□□□□ -0.55
ATP13A4-205ENST00000428352 HRCP23327 699 aa11.58□□□□□ -0.55
ATP13A4-205ENST00000428352 PPARGC1BQ86YN6 1023 aaKnown RBP11.22□□□□□ -0.61
ATP13A4-205ENST00000428352 PCGF6Q9BYE7 350 aa11.15□□□□□ -0.63
ATP13A4-205ENST00000428352 SCAF1Q9H7N4 1312 aaKnown RBP11.1□□□□□ -0.63
ATP13A4-205ENST00000428352 TTBK1Q5TCY1 1321 aaPredicted RBP11.07□□□□□ -0.64
ATP13A4-205ENST00000428352 ZEB1P37275 1124 aaPredicted RBP10.85□□□□□ -0.67
ATP13A4-205ENST00000428352 MYO15BQ96JP2 1530 aa10.81□□□□□ -0.68
ATP13A4-205ENST00000428352 ACIN1Q9UKV3 1341 aaKnown RBP10.78□□□□□ -0.68
ATP13A4-205ENST00000428352 DCAF1Q9Y4B6 1507 aa10.77□□□□□ -0.69
ATP13A4-205ENST00000428352 SUPT5HO00267 1087 aaKnown RBP10.74□□□□□ -0.69
ATP13A4-205ENST00000428352 TRIM26Q12899 539 aaPredicted RBP10.74□□□□□ -0.69
ATP13A4-205ENST00000428352 PRKCSHP14314 528 aaPredicted RBP10.71□□□□□ -0.7
ATP13A4-205ENST00000428352 CHIC1Q5VXU3 224 aa10.71□□□□□ -0.7
ATP13A4-205ENST00000428352 GTF3C3Q9Y5Q9 886 aa10.7□□□□□ -0.7
ATP13A4-205ENST00000428352 BCL11AQ9H165 835 aa10.69□□□□□ -0.7
ATP13A4-205ENST00000428352 NEUROD1Q13562 356 aa10.69□□□□□ -0.7
ATP13A4-205ENST00000428352 CCDC180Q9P1Z9 1646 aa10.68□□□□□ -0.7
ATP13A4-205ENST00000428352 CENPBP07199 599 aaPredicted RBP10.68□□□□□ -0.7
ATP13A4-205ENST00000428352 SHROOM4Q9ULL8 1493 aa10.59□□□□□ -0.71
ATP13A4-205ENST00000428352 FAM9AQ8IZU1 332 aaPredicted RBP10.59□□□□□ -0.71
ATP13A4-205ENST00000428352 ERICH6Q7L0X2 663 aa10.47□□□□□ -0.73
ATP13A4-205ENST00000428352 LOC105371045A0A1W2PR82 267 aa10.45□□□□□ -0.74
ATP13A4-205ENST00000428352 APLP2Q06481 763 aa10.44□□□□□ -0.74
ATP13A4-205ENST00000428352 DIEXFQ68CQ4 756 aaKnown RBP10.41□□□□□ -0.74
ATP13A4-205ENST00000428352 ANP32EQ9BTT0 268 aa10.39□□□□□ -0.75
ATP13A4-205ENST00000428352 CCER1Q8TC90 406 aaPredicted RBP10.24□□□□□ -0.77
ATP13A4-205ENST00000428352 YTHDC1Q96MU7 727 aaKnown RBP10.24□□□□□ -0.77
ATP13A4-205ENST00000428352 CSRNP3Q8WYN3 585 aa10.23□□□□□ -0.77
ATP13A4-205ENST00000428352 CLSPNQ9HAW4 1339 aa10.2□□□□□ -0.78
ATP13A4-205ENST00000428352 TRIM41Q8WV44 630 aa10.19□□□□□ -0.78
ATP13A4-205ENST00000428352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.18□□□□□ -0.78
ATP13A4-205ENST00000428352 TSHZ2Q9NRE2 1034 aa10.14□□□□□ -0.79
ATP13A4-205ENST00000428352 ZNF316A6NFI3 1004 aaPredicted RBP10.13□□□□□ -0.79
ATP13A4-205ENST00000428352 SUPT16HQ9Y5B9 1047 aaKnown RBP10.1□□□□□ -0.79
ATP13A4-205ENST00000428352 MIER1Q8N108 512 aa10.06□□□□□ -0.8
ATP13A4-205ENST00000428352 ZCCHC6Q5VYS8 1495 aaKnown RBP9.99□□□□□ -0.81
ATP13A4-205ENST00000428352 ANO8Q9HCE9 1232 aaPredicted RBP9.94□□□□□ -0.82
ATP13A4-205ENST00000428352 MYT1LQ9UL68 1186 aa9.92□□□□□ -0.82
ATP13A4-205ENST00000428352 SLC24A1O60721 1099 aa9.91□□□□□ -0.82
ATP13A4-205ENST00000428352 RBM19Q9Y4C8 960 aaKnown RBP9.89□□□□□ -0.83
ATP13A4-205ENST00000428352 UBE2Q2Q8WVN8 375 aa9.88□□□□□ -0.83
ATP13A4-205ENST00000428352 EHMT2Q96KQ7 1210 aa9.85□□□□□ -0.83
ATP13A4-205ENST00000428352 BCANQ96GW7 911 aa9.8□□□□□ -0.84
ATP13A4-205ENST00000428352 ERICH6BQ5W0A0 696 aa9.79□□□□□ -0.84
ATP13A4-205ENST00000428352 EIF5BO60841 1220 aaKnown RBP9.78□□□□□ -0.84
ATP13A4-205ENST00000428352 DEKP35659 375 aaKnown RBP9.78□□□□□ -0.84
ATP13A4-205ENST00000428352 MSH5O43196 834 aa9.78□□□□□ -0.84
ATP13A4-205ENST00000428352 SALL2Q9Y467 1007 aaPredicted RBP9.77□□□□□ -0.85
ATP13A4-205ENST00000428352 FKBP8Q14318 412 aa9.76□□□□□ -0.85
ATP13A4-205ENST00000428352 FANCIQ9NVI1 1328 aa9.76□□□□□ -0.85
ATP13A4-205ENST00000428352 NEFLP07196 543 aa9.75□□□□□ -0.85
ATP13A4-205ENST00000428352 DAXXQ9UER7 740 aaPredicted RBP9.71□□□□□ -0.85
ATP13A4-205ENST00000428352 DCAF8L2P0C7V8 631 aa9.71□□□□□ -0.85
ATP13A4-205ENST00000428352 WRNQ14191 1432 aaPredicted RBP eCLIP9.69□□□□□ -0.86
ATP13A4-205ENST00000428352 CCDC136Q96JN2 1154 aa9.68□□□□□ -0.86
ATP13A4-205ENST00000428352 ITGAEP38570 1179 aa9.64□□□□□ -0.87
ATP13A4-205ENST00000428352 CDK11AQ9UQ88 783 aaPredicted RBP9.64□□□□□ -0.87
ATP13A4-205ENST00000428352 PKNOX2Q96KN3 472 aa9.62□□□□□ -0.87
ATP13A4-205ENST00000428352 HNRNPUL2Q1KMD3 747 aaKnown RBP9.59□□□□□ -0.87
ATP13A4-205ENST00000428352 PLEKHG5O94827 1062 aa9.57□□□□□ -0.88
ATP13A4-205ENST00000428352 NBR1Q14596 966 aa9.55□□□□□ -0.88
ATP13A4-205ENST00000428352 RTL5Q5HYW3 569 aaPredicted RBP9.55□□□□□ -0.88
ATP13A4-205ENST00000428352 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.55□□□□□ -0.88
ATP13A4-205ENST00000428352 ABCC9O60706 1549 aa9.55□□□□□ -0.88
ATP13A4-205ENST00000428352 KCNH8Q96L42 1107 aa9.54□□□□□ -0.88
ATP13A4-205ENST00000428352 CEP162Q5TB80 1403 aa9.54□□□□□ -0.88
ATP13A4-205ENST00000428352 NOP58Q9Y2X3 529 aaKnown RBP9.54□□□□□ -0.88
ATP13A4-205ENST00000428352 RSF1Q96T23 1441 aaPredicted RBP9.53□□□□□ -0.88
ATP13A4-205ENST00000428352 IL27Q8NEV9 243 aa9.52□□□□□ -0.88
ATP13A4-205ENST00000428352 RB1CC1Q8TDY2 1594 aa9.51□□□□□ -0.89
ATP13A4-205ENST00000428352 RTN4Q9NQC3 1192 aaKnown RBP9.51□□□□□ -0.89
ATP13A4-205ENST00000428352 PODXL2Q9NZ53 605 aa9.5□□□□□ -0.89
ATP13A4-205ENST00000428352 TNIKQ9UKE5 1360 aa9.47□□□□□ -0.89
ATP13A4-205ENST00000428352 TRIM52Q96A61 297 aa9.46□□□□□ -0.9
ATP13A4-205ENST00000428352 DHX57Q6P158 1386 aaKnown RBP9.42□□□□□ -0.9
ATP13A4-205ENST00000428352 CCER2I3L3R5 266 aa9.42□□□□□ -0.9
ATP13A4-205ENST00000428352 PAK3O75914 559 aaPredicted RBP9.42□□□□□ -0.9
ATP13A4-205ENST00000428352 PPP4R2Q9NY27 417 aa9.4□□□□□ -0.9
ATP13A4-205ENST00000428352 UBTFP17480 764 aaKnown RBP9.4□□□□□ -0.9
ATP13A4-205ENST00000428352 GLIPR1L2Q4G1C9 344 aa9.4□□□□□ -0.9
ATP13A4-205ENST00000428352 ANP32AP39687 249 aaKnown RBP9.4□□□□□ -0.91
ATP13A4-205ENST00000428352 C11orf95C9JLR9 678 aaPredicted RBP9.39□□□□□ -0.91
ATP13A4-205ENST00000428352 DDX10Q13206 875 aaKnown RBP9.39□□□□□ -0.91
ATP13A4-205ENST00000428352 ZBTB47Q9UFB7 747 aaPredicted RBP9.39□□□□□ -0.91
ATP13A4-205ENST00000428352 ANP32CO43423 234 aa9.37□□□□□ -0.91
ATP13A4-205ENST00000428352 IRX6P78412 446 aaPredicted RBP9.37□□□□□ -0.91
ATP13A4-205ENST00000428352 IPO9Q96P70 1041 aaKnown RBP9.37□□□□□ -0.91
ATP13A4-205ENST00000428352 USP35Q9P2H5 1018 aa9.36□□□□□ -0.91
ATP13A4-205ENST00000428352 WASHC2AQ641Q2 1341 aa9.36□□□□□ -0.91
ATP13A4-205ENST00000428352 RSPH6AQ9H0K4 717 aa9.35□□□□□ -0.91
ATP13A4-205ENST00000428352 WASHC2CQ9Y4E1 1318 aa9.32□□□□□ -0.92
ATP13A4-205ENST00000428352 EEA1Q15075 1411 aa9.31□□□□□ -0.92
ATP13A4-205ENST00000428352 PPP1R15AO75807 674 aaPredicted RBP9.31□□□□□ -0.92
ATP13A4-205ENST00000428352 ZMYND15Q9H091 742 aa9.31□□□□□ -0.92
ATP13A4-205ENST00000428352 HNRNPUQ00839 825 aaKnown RBP eCLIP9.3□□□□□ -0.92
ATP13A4-205ENST00000428352 NEFMP07197 916 aa9.3□□□□□ -0.92
ATP13A4-205ENST00000428352 B4GALNT3Q6L9W6 998 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms