RNA–Protein interactions for RNA: ENST00000421595.1

LINC00484-202, long intergenic non-protein coding RNA 484, humanhuman

TSL 3

Gene LINC00484, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00484-202ENST00000421595 CHIC1Q5VXU3 224 aa14.94□□□□□ -0.02
LINC00484-202ENST00000421595 AEBP2Q6ZN18 517 aaPredicted RBP14.73□□□□□ -0.05
LINC00484-202ENST00000421595 PHF23Q9BUL5 403 aaPredicted RBP13.12□□□□□ -0.31
LINC00484-202ENST00000421595 SENP3Q9H4L4 574 aaPredicted RBP12.54□□□□□ -0.4
LINC00484-202ENST00000421595 PLPPR3Q6T4P5 718 aa12.38□□□□□ -0.43
LINC00484-202ENST00000421595 FOXD1Q16676 465 aa11.48□□□□□ -0.57
LINC00484-202ENST00000421595 ADRA2BP18089 450 aa11.45□□□□□ -0.58
LINC00484-202ENST00000421595 PPP6R1Q9UPN7 881 aa11.39□□□□□ -0.59
LINC00484-202ENST00000421595 KCNA4P22459 653 aa11.17□□□□□ -0.62
LINC00484-202ENST00000421595 PIAS4Q8N2W9 510 aaPredicted RBP10.98□□□□□ -0.65
LINC00484-202ENST00000421595 EHMT2Q96KQ7 1210 aa10.96□□□□□ -0.65
LINC00484-202ENST00000421595 PPP4R3CPQ6ZMV5 832 aa10.92□□□□□ -0.66
LINC00484-202ENST00000421595 NCBP3Q53F19 620 aaKnown RBP10.85□□□□□ -0.67
LINC00484-202ENST00000421595 SLC4A1APQ9BWU0 796 aaKnown RBP10.78□□□□□ -0.68
LINC00484-202ENST00000421595 NISCHQ9Y2I1 1504 aa10.66□□□□□ -0.7
LINC00484-202ENST00000421595 CSRNP3Q8WYN3 585 aa10.64□□□□□ -0.71
LINC00484-202ENST00000421595 NPM3O75607 178 aaKnown RBP10.6□□□□□ -0.71
LINC00484-202ENST00000421595 SCAF1Q9H7N4 1312 aaKnown RBP10.58□□□□□ -0.71
LINC00484-202ENST00000421595 CNKSR2Q8WXI2 1034 aa10.55□□□□□ -0.72
LINC00484-202ENST00000421595 MSH5O43196 834 aa10.5□□□□□ -0.73
LINC00484-202ENST00000421595 DNAJC5BQ9UF47 199 aa10.36□□□□□ -0.75
LINC00484-202ENST00000421595 ZBTB22O15209 634 aa10.27□□□□□ -0.77
LINC00484-202ENST00000421595 RNF216Q9NWF9 866 aaPredicted RBP10.23□□□□□ -0.77
LINC00484-202ENST00000421595 FOXD4L1Q9NU39 408 aa10.22□□□□□ -0.77
LINC00484-202ENST00000421595 MAPK8IP2Q13387 824 aaPredicted RBP10.19□□□□□ -0.78
LINC00484-202ENST00000421595 DMRT2Q9Y5R5 561 aa10.06□□□□□ -0.8
LINC00484-202ENST00000421595 HOXD11P31277 338 aaPredicted RBP10.05□□□□□ -0.8
LINC00484-202ENST00000421595 ABCC9O60706 1549 aa10□□□□□ -0.81
LINC00484-202ENST00000421595 SLC4A2P04920 1241 aa9.88□□□□□ -0.83
LINC00484-202ENST00000421595 ATXN8OSP0DMR3 200 aa9.88□□□□□ -0.83
LINC00484-202ENST00000421595 MYCNP04198 464 aaPredicted RBP9.84□□□□□ -0.83
LINC00484-202ENST00000421595 CCDC180Q9P1Z9 1646 aa9.79□□□□□ -0.84
LINC00484-202ENST00000421595 AMER1Q5JTC6 1135 aaPredicted RBP9.67□□□□□ -0.86
LINC00484-202ENST00000421595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.6□□□□□ -0.87
LINC00484-202ENST00000421595 HNRNPUL2Q1KMD3 747 aaKnown RBP9.6□□□□□ -0.87
LINC00484-202ENST00000421595 FKBP8Q14318 412 aa9.59□□□□□ -0.87
LINC00484-202ENST00000421595 SAMD1Q6SPF0 538 aaPredicted RBP9.57□□□□□ -0.88
LINC00484-202ENST00000421595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.56□□□□□ -0.88
LINC00484-202ENST00000421595 RTN4Q9NQC3 1192 aaKnown RBP9.56□□□□□ -0.88
LINC00484-202ENST00000421595 DCAF8L1A6NGE4 600 aa9.54□□□□□ -0.88
LINC00484-202ENST00000421595 SLC24A1O60721 1099 aa9.48□□□□□ -0.89
LINC00484-202ENST00000421595 U3KPZ7 1027 aaPredicted RBP9.44□□□□□ -0.9
LINC00484-202ENST00000421595 RB1CC1Q8TDY2 1594 aa9.43□□□□□ -0.9
LINC00484-202ENST00000421595 ATF5Q9Y2D1 282 aaPredicted RBP9.43□□□□□ -0.9
LINC00484-202ENST00000421595 APLP2Q06481 763 aa9.41□□□□□ -0.9
LINC00484-202ENST00000421595 ZNF219Q9P2Y4 722 aaPredicted RBP9.3□□□□□ -0.92
LINC00484-202ENST00000421595 UNC13AQ9UPW8 1703 aa9.27□□□□□ -0.93
LINC00484-202ENST00000421595 NACADO15069 1562 aa9.25□□□□□ -0.93
LINC00484-202ENST00000421595 FBXO3Q9UK99 471 aa9.22□□□□□ -0.93
LINC00484-202ENST00000421595 DCAF8L2P0C7V8 631 aa9.21□□□□□ -0.94
LINC00484-202ENST00000421595 PABPN1Q86U42 306 aaKnown RBP eCLIP9.21□□□□□ -0.94
LINC00484-202ENST00000421595 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.94
LINC00484-202ENST00000421595 FBLN2P98095 1184 aa9.13□□□□□ -0.95
LINC00484-202ENST00000421595 DNAJC5Q9H3Z4 198 aa9.11□□□□□ -0.95
LINC00484-202ENST00000421595 PROM2Q8N271 834 aa9.1□□□□□ -0.95
LINC00484-202ENST00000421595 MKRN4PQ13434 485 aaPredicted RBP9.07□□□□□ -0.96
LINC00484-202ENST00000421595 BICRAQ9NZM4 1560 aa9.07□□□□□ -0.96
LINC00484-202ENST00000421595 TRHP20396 242 aaPredicted RBP9.03□□□□□ -0.96
LINC00484-202ENST00000421595 CC2D2AQ9P2K1 1620 aa9.02□□□□□ -0.96
LINC00484-202ENST00000421595 VASPP50552 380 aaPredicted RBP9.02□□□□□ -0.97
LINC00484-202ENST00000421595 CECR2Q9BXF3 1484 aa9.02□□□□□ -0.97
LINC00484-202ENST00000421595 RNF39Q9H2S5 420 aa9.01□□□□□ -0.97
LINC00484-202ENST00000421595 ZBTB12Q9Y330 459 aaPredicted RBP9.01□□□□□ -0.97
LINC00484-202ENST00000421595 POLA2Q14181 598 aa9□□□□□ -0.97
LINC00484-202ENST00000421595 SPINK5Q9NQ38 1064 aaPredicted RBP8.99□□□□□ -0.97
LINC00484-202ENST00000421595 CAPN15O75808 1086 aa8.97□□□□□ -0.97
LINC00484-202ENST00000421595 C1QBPQ07021 282 aaKnown RBP8.97□□□□□ -0.97
LINC00484-202ENST00000421595 SHROOM4Q9ULL8 1493 aa8.95□□□□□ -0.98
LINC00484-202ENST00000421595 MYO15BQ96JP2 1530 aa8.95□□□□□ -0.98
LINC00484-202ENST00000421595 SCRIBQ14160 1630 aa8.93□□□□□ -0.98
LINC00484-202ENST00000421595 EIF4G1Q04637 1599 aaKnown RBP8.92□□□□□ -0.98
LINC00484-202ENST00000421595 IFNLR1Q8IU57 520 aaPredicted RBP8.89□□□□□ -0.99
LINC00484-202ENST00000421595 PLCB2Q00722 1185 aa8.88□□□□□ -0.99
LINC00484-202ENST00000421595 ABCB7O75027 752 aa8.8□□□□□ -1
LINC00484-202ENST00000421595 STAG3Q9UJ98 1225 aa8.8□□□□□ -1
LINC00484-202ENST00000421595 PKD2Q13563 968 aa8.79□□□□□ -1
LINC00484-202ENST00000421595 ZCCHC6Q5VYS8 1495 aaKnown RBP8.78□□□□□ -1
LINC00484-202ENST00000421595 SPDYE2BA6NHP3 402 aa8.77□□□□□ -1.01
LINC00484-202ENST00000421595 SPDYE6P0CI01 402 aa8.77□□□□□ -1.01
LINC00484-202ENST00000421595 SPDYE2Q495Y8 402 aa8.77□□□□□ -1.01
LINC00484-202ENST00000421595 SPOCK2Q92563 424 aa8.76□□□□□ -1.01
LINC00484-202ENST00000421595 ZNF692Q9BU19 519 aaPredicted RBP8.76□□□□□ -1.01
LINC00484-202ENST00000421595 DCAF1Q9Y4B6 1507 aa8.75□□□□□ -1.01
LINC00484-202ENST00000421595 KLHL34Q8N239 644 aa8.74□□□□□ -1.01
LINC00484-202ENST00000421595 SSUH2Q9Y2M2 353 aa8.73□□□□□ -1.01
LINC00484-202ENST00000421595 ERCC6Q03468 1493 aa8.72□□□□□ -1.01
LINC00484-202ENST00000421595 DSG3P32926 999 aa8.72□□□□□ -1.01
LINC00484-202ENST00000421595 HAP1P54257 671 aaPredicted RBP8.71□□□□□ -1.02
LINC00484-202ENST00000421595 CUX2O14529 1486 aa8.7□□□□□ -1.02
LINC00484-202ENST00000421595 OSCARQ8IYS5 282 aa8.68□□□□□ -1.02
LINC00484-202ENST00000421595 PLCD3Q8N3E9 789 aa8.68□□□□□ -1.02
LINC00484-202ENST00000421595 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.67□□□□□ -1.02
LINC00484-202ENST00000421595 ECM2O94769 699 aaPredicted RBP8.66□□□□□ -1.02
LINC00484-202ENST00000421595 VSIG10Q8N0Z9 540 aa8.66□□□□□ -1.02
LINC00484-202ENST00000421595 BBXQ8WY36 941 aaPredicted RBP8.65□□□□□ -1.02
LINC00484-202ENST00000421595 ZBTB47Q9UFB7 747 aaPredicted RBP8.64□□□□□ -1.03
LINC00484-202ENST00000421595 PLEKHG5O94827 1062 aa8.63□□□□□ -1.03
LINC00484-202ENST00000421595 POTEDQ86YR6 584 aa8.63□□□□□ -1.03
LINC00484-202ENST00000421595 MIER1Q8N108 512 aa8.61□□□□□ -1.03
LINC00484-202ENST00000421595 BCANQ96GW7 911 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms