RNA–Protein interactions for RNA: ENST00000413656.5

MTHFR-206, Transcript of methylenetetrahydrofolate reductase, humanhuman

TSL 1 (best)

Gene MTHFR, Length 398 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-206ENST00000413656 AEBP2Q6ZN18 517 aaPredicted RBP20.6■□□□□ 0.89
MTHFR-206ENST00000413656 CHIC1Q5VXU3 224 aa20.54■□□□□ 0.88
MTHFR-206ENST00000413656 PHF23Q9BUL5 403 aaPredicted RBP18.19■□□□□ 0.5
MTHFR-206ENST00000413656 SENP3Q9H4L4 574 aaPredicted RBP17.27■□□□□ 0.36
MTHFR-206ENST00000413656 NISCHQ9Y2I1 1504 aa16.95■□□□□ 0.3
MTHFR-206ENST00000413656 PLPPR3Q6T4P5 718 aa16.84■□□□□ 0.29
MTHFR-206ENST00000413656 FOXD1Q16676 465 aa16.04■□□□□ 0.16
MTHFR-206ENST00000413656 PPP6R1Q9UPN7 881 aa15.89■□□□□ 0.13
MTHFR-206ENST00000413656 ADRA2BP18089 450 aa15.88■□□□□ 0.13
MTHFR-206ENST00000413656 KCNA4P22459 653 aa15.2■□□□□ 0.02
MTHFR-206ENST00000413656 PIAS4Q8N2W9 510 aaPredicted RBP15.19■□□□□ 0.02
MTHFR-206ENST00000413656 PPP4R3CPQ6ZMV5 832 aa14.94□□□□□ -0.02
MTHFR-206ENST00000413656 CCDC180Q9P1Z9 1646 aa14.81□□□□□ -0.04
MTHFR-206ENST00000413656 EHMT2Q96KQ7 1210 aa14.68□□□□□ -0.06
MTHFR-206ENST00000413656 NCBP3Q53F19 620 aaKnown RBP14.6□□□□□ -0.07
MTHFR-206ENST00000413656 NPM3O75607 178 aaKnown RBP14.51□□□□□ -0.09
MTHFR-206ENST00000413656 MSH5O43196 834 aa14.5□□□□□ -0.09
MTHFR-206ENST00000413656 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
MTHFR-206ENST00000413656 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
MTHFR-206ENST00000413656 CNKSR2Q8WXI2 1034 aa14.38□□□□□ -0.11
MTHFR-206ENST00000413656 SCAF1Q9H7N4 1312 aaKnown RBP14.36□□□□□ -0.11
MTHFR-206ENST00000413656 CSRNP3Q8WYN3 585 aa14.35□□□□□ -0.11
MTHFR-206ENST00000413656 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
MTHFR-206ENST00000413656 DCAF1Q9Y4B6 1507 aa14.11□□□□□ -0.15
MTHFR-206ENST00000413656 ZBTB22O15209 634 aa14.06□□□□□ -0.16
MTHFR-206ENST00000413656 DNAJC5BQ9UF47 199 aa14.03□□□□□ -0.16
MTHFR-206ENST00000413656 SHROOM4Q9ULL8 1493 aa14.03□□□□□ -0.16
MTHFR-206ENST00000413656 RNF216Q9NWF9 866 aaPredicted RBP13.99□□□□□ -0.17
MTHFR-206ENST00000413656 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
MTHFR-206ENST00000413656 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
MTHFR-206ENST00000413656 FOXD4L1Q9NU39 408 aa13.8□□□□□ -0.2
MTHFR-206ENST00000413656 MYO15BQ96JP2 1530 aa13.77□□□□□ -0.21
MTHFR-206ENST00000413656 SUPT5HO00267 1087 aaKnown RBP13.71□□□□□ -0.21
MTHFR-206ENST00000413656 ABCC9O60706 1549 aa13.67□□□□□ -0.22
MTHFR-206ENST00000413656 DCAF8L2P0C7V8 631 aa13.66□□□□□ -0.22
MTHFR-206ENST00000413656 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
MTHFR-206ENST00000413656 NACADO15069 1562 aa13.56□□□□□ -0.24
MTHFR-206ENST00000413656 SCRIBQ14160 1630 aa13.53□□□□□ -0.24
MTHFR-206ENST00000413656 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
MTHFR-206ENST00000413656 MYCNP04198 464 aaPredicted RBP13.33□□□□□ -0.28
MTHFR-206ENST00000413656 ATXN8OSP0DMR3 200 aa13.25□□□□□ -0.29
MTHFR-206ENST00000413656 RSF1Q96T23 1441 aaPredicted RBP13.23□□□□□ -0.29
MTHFR-206ENST00000413656 DCAF8L1A6NGE4 600 aa13.19□□□□□ -0.3
MTHFR-206ENST00000413656 BAZ1AQ9NRL2 1556 aaPredicted RBP13.19□□□□□ -0.3
MTHFR-206ENST00000413656 UNC13AQ9UPW8 1703 aa13.13□□□□□ -0.31
MTHFR-206ENST00000413656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.1□□□□□ -0.31
MTHFR-206ENST00000413656 WIZO95785 1651 aa13.05□□□□□ -0.32
MTHFR-206ENST00000413656 MROH2BQ7Z745 1585 aa13.05□□□□□ -0.32
MTHFR-206ENST00000413656 ATF5Q9Y2D1 282 aaPredicted RBP13.04□□□□□ -0.32
MTHFR-206ENST00000413656 U3KPZ7 1027 aaPredicted RBP13.04□□□□□ -0.32
MTHFR-206ENST00000413656 SMARCA4P51532 1647 aa13.02□□□□□ -0.32
MTHFR-206ENST00000413656 TOP2AP11388 1531 aaKnown RBP13.01□□□□□ -0.33
MTHFR-206ENST00000413656 CECR2Q9BXF3 1484 aa12.99□□□□□ -0.33
MTHFR-206ENST00000413656 EIF4G1Q04637 1599 aaKnown RBP12.97□□□□□ -0.33
MTHFR-206ENST00000413656 TRIM41Q8WV44 630 aa12.93□□□□□ -0.34
MTHFR-206ENST00000413656 SAMD1Q6SPF0 538 aaPredicted RBP12.92□□□□□ -0.34
MTHFR-206ENST00000413656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
MTHFR-206ENST00000413656 HRCP23327 699 aa12.91□□□□□ -0.34
MTHFR-206ENST00000413656 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
MTHFR-206ENST00000413656 FKBP8Q14318 412 aa12.87□□□□□ -0.35
MTHFR-206ENST00000413656 SMARCA2P51531 1590 aa12.86□□□□□ -0.35
MTHFR-206ENST00000413656 PEG3Q9GZU2 1588 aa12.83□□□□□ -0.36
MTHFR-206ENST00000413656 PCGF6Q9BYE7 350 aa12.82□□□□□ -0.36
MTHFR-206ENST00000413656 TRIM26Q12899 539 aaPredicted RBP12.79□□□□□ -0.36
MTHFR-206ENST00000413656 BICRAQ9NZM4 1560 aa12.78□□□□□ -0.36
MTHFR-206ENST00000413656 LOC105371045A0A1W2PR82 267 aa12.75□□□□□ -0.37
MTHFR-206ENST00000413656 EEA1Q15075 1411 aa12.75□□□□□ -0.37
MTHFR-206ENST00000413656 CCDC88BA6NC98 1476 aa12.72□□□□□ -0.37
MTHFR-206ENST00000413656 ZEB1P37275 1124 aaPredicted RBP12.69□□□□□ -0.38
MTHFR-206ENST00000413656 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
MTHFR-206ENST00000413656 ABCC8Q09428 1581 aa12.66□□□□□ -0.38
MTHFR-206ENST00000413656 RTN4Q9NQC3 1192 aaKnown RBP12.65□□□□□ -0.38
MTHFR-206ENST00000413656 BAZ1BQ9UIG0 1483 aaKnown RBP12.62□□□□□ -0.39
MTHFR-206ENST00000413656 FAM9AQ8IZU1 332 aaPredicted RBP12.62□□□□□ -0.39
MTHFR-206ENST00000413656 APLP2Q06481 763 aa12.61□□□□□ -0.39
MTHFR-206ENST00000413656 AMER1Q5JTC6 1135 aaPredicted RBP12.58□□□□□ -0.4
MTHFR-206ENST00000413656 KIF21BO75037 1637 aa12.58□□□□□ -0.4
MTHFR-206ENST00000413656 PRDM2Q13029 1718 aa12.57□□□□□ -0.4
MTHFR-206ENST00000413656 GOLGA3Q08378 1498 aa12.56□□□□□ -0.4
MTHFR-206ENST00000413656 ATAD2BQ9ULI0 1458 aa12.56□□□□□ -0.4
MTHFR-206ENST00000413656 WRNQ14191 1432 aaPredicted RBP eCLIP12.55□□□□□ -0.4
MTHFR-206ENST00000413656 RNF39Q9H2S5 420 aa12.55□□□□□ -0.4
MTHFR-206ENST00000413656 HMGXB3Q12766 1538 aa12.55□□□□□ -0.4
MTHFR-206ENST00000413656 SPINK5Q9NQ38 1064 aaPredicted RBP12.53□□□□□ -0.4
MTHFR-206ENST00000413656 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
MTHFR-206ENST00000413656 CEP164Q9UPV0 1460 aa12.51□□□□□ -0.41
MTHFR-206ENST00000413656 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
MTHFR-206ENST00000413656 TNIKQ9UKE5 1360 aa12.5□□□□□ -0.41
MTHFR-206ENST00000413656 CEP162Q5TB80 1403 aa12.5□□□□□ -0.41
MTHFR-206ENST00000413656 SYNJ1O43426 1573 aa12.49□□□□□ -0.41
MTHFR-206ENST00000413656 TOP2BQ02880 1626 aa12.47□□□□□ -0.41
MTHFR-206ENST00000413656 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
MTHFR-206ENST00000413656 TRHP20396 242 aaPredicted RBP12.43□□□□□ -0.42
MTHFR-206ENST00000413656 SOGA1O94964 1423 aa12.41□□□□□ -0.42
MTHFR-206ENST00000413656 POTEDQ86YR6 584 aa12.4□□□□□ -0.42
MTHFR-206ENST00000413656 ERICH3Q5RHP9 1530 aa12.39□□□□□ -0.43
MTHFR-206ENST00000413656 POLA2Q14181 598 aa12.38□□□□□ -0.43
MTHFR-206ENST00000413656 SPDYE4A6NLX3 237 aa12.37□□□□□ -0.43
MTHFR-206ENST00000413656 C1QBPQ07021 282 aaKnown RBP12.37□□□□□ -0.43
MTHFR-206ENST00000413656 NCAPD3P42695 1498 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms