RNA–Protein interactions for RNA: ENST00000409855.5

SCN7A-201, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN7A, Length 7,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-201ENST00000409855 NISCHQ9Y2I1 1504 aa3.69□□□□□ -1.82
SCN7A-201ENST00000409855 FAM9AQ8IZU1 332 aaPredicted RBP3.67□□□□□ -1.82
SCN7A-201ENST00000409855 DCAF8L2P0C7V8 631 aa3.58□□□□□ -1.84
SCN7A-201ENST00000409855 CHIC1Q5VXU3 224 aa3.36□□□□□ -1.87
SCN7A-201ENST00000409855 APLP2Q06481 763 aa3.35□□□□□ -1.87
SCN7A-201ENST00000409855 AEBP2Q6ZN18 517 aaPredicted RBP3.21□□□□□ -1.9
SCN7A-201ENST00000409855 PELP1Q8IZL8 1130 aaKnown RBP3.2□□□□□ -1.9
SCN7A-201ENST00000409855 MYT1LQ9UL68 1186 aa3.17□□□□□ -1.9
SCN7A-201ENST00000409855 NPM1P06748 294 aaKnown RBP eCLIP3.16□□□□□ -1.9
SCN7A-201ENST00000409855 SUPT5HO00267 1087 aaKnown RBP3.16□□□□□ -1.9
SCN7A-201ENST00000409855 FOXD1Q16676 465 aa3.15□□□□□ -1.9
SCN7A-201ENST00000409855 ABCC9O60706 1549 aa3.15□□□□□ -1.91
SCN7A-201ENST00000409855 ESF1Q9H501 851 aaKnown RBP3.14□□□□□ -1.91
SCN7A-201ENST00000409855 ACIN1Q9UKV3 1341 aaKnown RBP3.13□□□□□ -1.91
SCN7A-201ENST00000409855 RB1CC1Q8TDY2 1594 aa3.13□□□□□ -1.91
SCN7A-201ENST00000409855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.11□□□□□ -1.91
SCN7A-201ENST00000409855 HNRNPUL2Q1KMD3 747 aaKnown RBP3.11□□□□□ -1.91
SCN7A-201ENST00000409855 CDK11AQ9UQ88 783 aaPredicted RBP3.11□□□□□ -1.91
SCN7A-201ENST00000409855 CCDC180Q9P1Z9 1646 aa3.1□□□□□ -1.91
SCN7A-201ENST00000409855 NEFMP07197 916 aa3.09□□□□□ -1.91
SCN7A-201ENST00000409855 SHROOM4Q9ULL8 1493 aa3.09□□□□□ -1.91
SCN7A-201ENST00000409855 TRIM41Q8WV44 630 aa3.09□□□□□ -1.91
SCN7A-201ENST00000409855 ATP1B4Q9UN42 357 aaPredicted RBP3.09□□□□□ -1.91
SCN7A-201ENST00000409855 NACADO15069 1562 aa3.07□□□□□ -1.92
SCN7A-201ENST00000409855 UBTFP17480 764 aaKnown RBP3.07□□□□□ -1.92
SCN7A-201ENST00000409855 CCER1Q8TC90 406 aaPredicted RBP3.07□□□□□ -1.92
SCN7A-201ENST00000409855 DNAJC5BQ9UF47 199 aa3.06□□□□□ -1.92
SCN7A-201ENST00000409855 DCAF8L1A6NGE4 600 aa3.05□□□□□ -1.92
SCN7A-201ENST00000409855 ERCC6Q03468 1493 aa3.04□□□□□ -1.92
SCN7A-201ENST00000409855 ZEB1P37275 1124 aaPredicted RBP3.04□□□□□ -1.92
SCN7A-201ENST00000409855 PABPN1Q86U42 306 aaKnown RBP eCLIP3.03□□□□□ -1.92
SCN7A-201ENST00000409855 FBLN2P98095 1184 aa3.02□□□□□ -1.93
SCN7A-201ENST00000409855 CHMP7Q8WUX9 453 aaPredicted RBP3.02□□□□□ -1.93
SCN7A-201ENST00000409855 HDGFP51858 240 aaKnown RBP3.01□□□□□ -1.93
SCN7A-201ENST00000409855 MYO15BQ96JP2 1530 aa3□□□□□ -1.93
SCN7A-201ENST00000409855 BCANQ96GW7 911 aa3□□□□□ -1.93
SCN7A-201ENST00000409855 HMGB2P26583 209 aaKnown RBP2.99□□□□□ -1.93
SCN7A-201ENST00000409855 STAG3Q9UJ98 1225 aa2.99□□□□□ -1.93
SCN7A-201ENST00000409855 PDS5BQ9NTI5 1447 aa2.99□□□□□ -1.93
SCN7A-201ENST00000409855 SLC24A1O60721 1099 aa2.98□□□□□ -1.93
SCN7A-201ENST00000409855 SCRIBQ14160 1630 aa2.98□□□□□ -1.93
SCN7A-201ENST00000409855 ANO8Q9HCE9 1232 aaPredicted RBP2.97□□□□□ -1.93
SCN7A-201ENST00000409855 CSRNP3Q8WYN3 585 aa2.97□□□□□ -1.93
SCN7A-201ENST00000409855 DCAF1Q9Y4B6 1507 aa2.96□□□□□ -1.94
SCN7A-201ENST00000409855 TTBK1Q5TCY1 1321 aaPredicted RBP2.96□□□□□ -1.94
SCN7A-201ENST00000409855 ZBTB47Q9UFB7 747 aaPredicted RBP2.96□□□□□ -1.94
SCN7A-201ENST00000409855 BAZ1BQ9UIG0 1483 aaKnown RBP2.95□□□□□ -1.94
SCN7A-201ENST00000409855 RSF1Q96T23 1441 aaPredicted RBP2.95□□□□□ -1.94
SCN7A-201ENST00000409855 RANGAP1P46060 587 aaPredicted RBP2.94□□□□□ -1.94
SCN7A-201ENST00000409855 NPM2Q86SE8 214 aaKnown RBP2.94□□□□□ -1.94
SCN7A-201ENST00000409855 NEFLP07196 543 aa2.94□□□□□ -1.94
SCN7A-201ENST00000409855 EIF4G2P78344 907 aaKnown RBP eCLIP2.94□□□□□ -1.94
SCN7A-201ENST00000409855 CARMIL2Q6F5E8 1435 aa2.94□□□□□ -1.94
SCN7A-201ENST00000409855 ABCC8Q09428 1581 aa2.94□□□□□ -1.94
SCN7A-201ENST00000409855 SMARCA2P51531 1590 aa2.94□□□□□ -1.94
SCN7A-201ENST00000409855 EEA1Q15075 1411 aa2.94□□□□□ -1.94
SCN7A-201ENST00000409855 TRHP20396 242 aaPredicted RBP2.94□□□□□ -1.94
SCN7A-201ENST00000409855 ZCCHC6Q5VYS8 1495 aaKnown RBP2.94□□□□□ -1.94
SCN7A-201ENST00000409855 PHF23Q9BUL5 403 aaPredicted RBP2.93□□□□□ -1.94
SCN7A-201ENST00000409855 SLC4A1APQ9BWU0 796 aaKnown RBP2.93□□□□□ -1.94
SCN7A-201ENST00000409855 PPP1R15AO75807 674 aaPredicted RBP2.93□□□□□ -1.94
SCN7A-201ENST00000409855 ARID4BQ4LE39 1312 aaPredicted RBP2.93□□□□□ -1.94
SCN7A-201ENST00000409855 PLEKHD1A6NEE1 506 aa2.92□□□□□ -1.94
SCN7A-201ENST00000409855 KANK1Q14678 1352 aa2.92□□□□□ -1.94
SCN7A-201ENST00000409855 TSPY4P0CV99 314 aa2.92□□□□□ -1.94
SCN7A-201ENST00000409855 TSPY10P0CW01 314 aa2.92□□□□□ -1.94
SCN7A-201ENST00000409855 HAP1P54257 671 aaPredicted RBP2.92□□□□□ -1.94
SCN7A-201ENST00000409855 SCAF1Q9H7N4 1312 aaKnown RBP2.92□□□□□ -1.94
SCN7A-201ENST00000409855 CEP162Q5TB80 1403 aa2.92□□□□□ -1.94
SCN7A-201ENST00000409855 TRIM52Q96A61 297 aa2.92□□□□□ -1.94
SCN7A-201ENST00000409855 CLIP1P30622 1438 aa2.92□□□□□ -1.94
SCN7A-201ENST00000409855 EIF5BO60841 1220 aaKnown RBP2.91□□□□□ -1.94
SCN7A-201ENST00000409855 C14orf37Q86TY3 774 aa2.9□□□□□ -1.94
SCN7A-201ENST00000409855 YTHDC1Q96MU7 727 aaKnown RBP2.9□□□□□ -1.95
SCN7A-201ENST00000409855 CHMP4AQ9BY43 222 aa2.9□□□□□ -1.95
SCN7A-201ENST00000409855 BAZ1AQ9NRL2 1556 aaPredicted RBP2.9□□□□□ -1.95
SCN7A-201ENST00000409855 CENPBP07199 599 aaPredicted RBP2.9□□□□□ -1.95
SCN7A-201ENST00000409855 CECR2Q9BXF3 1484 aa2.9□□□□□ -1.95
SCN7A-201ENST00000409855 DAXXQ9UER7 740 aaPredicted RBP2.89□□□□□ -1.95
SCN7A-201ENST00000409855 WASHC2AQ641Q2 1341 aa2.89□□□□□ -1.95
SCN7A-201ENST00000409855 CDCA8Q53HL2 280 aa2.89□□□□□ -1.95
SCN7A-201ENST00000409855 ERICH6Q7L0X2 663 aa2.89□□□□□ -1.95
SCN7A-201ENST00000409855 OSCARQ8IYS5 282 aa2.89□□□□□ -1.95
SCN7A-201ENST00000409855 EHMT2Q96KQ7 1210 aa2.89□□□□□ -1.95
SCN7A-201ENST00000409855 KIF27Q86VH2 1401 aa2.89□□□□□ -1.95
SCN7A-201ENST00000409855 CEP164Q9UPV0 1460 aa2.88□□□□□ -1.95
SCN7A-201ENST00000409855 TMX4Q9H1E5 349 aaPredicted RBP2.88□□□□□ -1.95
SCN7A-201ENST00000409855 FAM50AQ14320 339 aaKnown RBP2.88□□□□□ -1.95
SCN7A-201ENST00000409855 GOLGA3Q08378 1498 aa2.88□□□□□ -1.95
SCN7A-201ENST00000409855 WRNQ14191 1432 aaPredicted RBP eCLIP2.88□□□□□ -1.95
SCN7A-201ENST00000409855 RSPH4AQ5TD94 716 aa2.87□□□□□ -1.95
SCN7A-201ENST00000409855 ZNF777Q9ULD5 760 aaPredicted RBP2.87□□□□□ -1.95
SCN7A-201ENST00000409855 POGZQ7Z3K3 1410 aa2.86□□□□□ -1.95
SCN7A-201ENST00000409855 EID1Q9Y6B2 187 aa2.86□□□□□ -1.95
SCN7A-201ENST00000409855 PNNQ9H307 717 aaKnown RBP2.86□□□□□ -1.95
SCN7A-201ENST00000409855 CHGAP10645 457 aaKnown RBP2.85□□□□□ -1.95
SCN7A-201ENST00000409855 MTUS2Q5JR59 1369 aa2.85□□□□□ -1.95
SCN7A-201ENST00000409855 DMRT2Q9Y5R5 561 aa2.85□□□□□ -1.95
SCN7A-201ENST00000409855 FHAD1B1AJZ9 1412 aa2.85□□□□□ -1.95
SCN7A-201ENST00000409855 ZNF326Q5BKZ1 582 aaKnown RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms