RNA–Protein interactions for RNA: ENST00000399179.6

DNA2-202, Transcript of DNA replication helicase/nuclease 2, humanhuman

TSL 2

Gene DNA2, Length 3,207 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNA2-202ENST00000399179 NISCHQ9Y2I1 1504 aa13.74□□□□□ -0.21
DNA2-202ENST00000399179 PELP1Q8IZL8 1130 aaKnown RBP12.73□□□□□ -0.37
DNA2-202ENST00000399179 HRCP23327 699 aa12.6□□□□□ -0.39
DNA2-202ENST00000399179 MYT1Q01538 1121 aa12.35□□□□□ -0.43
DNA2-202ENST00000399179 PPARGC1BQ86YN6 1023 aaKnown RBP12.32□□□□□ -0.44
DNA2-202ENST00000399179 PCGF6Q9BYE7 350 aa12.17□□□□□ -0.46
DNA2-202ENST00000399179 SCAF1Q9H7N4 1312 aaKnown RBP12.13□□□□□ -0.47
DNA2-202ENST00000399179 MYO15BQ96JP2 1530 aa12□□□□□ -0.49
DNA2-202ENST00000399179 DCAF1Q9Y4B6 1507 aa11.92□□□□□ -0.5
DNA2-202ENST00000399179 CHIC1Q5VXU3 224 aa11.91□□□□□ -0.5
DNA2-202ENST00000399179 SUPT5HO00267 1087 aaKnown RBP11.9□□□□□ -0.51
DNA2-202ENST00000399179 SHROOM4Q9ULL8 1493 aa11.89□□□□□ -0.51
DNA2-202ENST00000399179 CCDC180Q9P1Z9 1646 aa11.78□□□□□ -0.52
DNA2-202ENST00000399179 ZCCHC6Q5VYS8 1495 aaKnown RBP11.73□□□□□ -0.53
DNA2-202ENST00000399179 ACIN1Q9UKV3 1341 aaKnown RBP11.72□□□□□ -0.53
DNA2-202ENST00000399179 ZEB1P37275 1124 aaPredicted RBP11.71□□□□□ -0.53
DNA2-202ENST00000399179 TRIM26Q12899 539 aaPredicted RBP11.71□□□□□ -0.53
DNA2-202ENST00000399179 TTBK1Q5TCY1 1321 aaPredicted RBP11.69□□□□□ -0.54
DNA2-202ENST00000399179 NEUROD1Q13562 356 aa11.67□□□□□ -0.54
DNA2-202ENST00000399179 GTF3C3Q9Y5Q9 886 aa11.65□□□□□ -0.54
DNA2-202ENST00000399179 CENPBP07199 599 aaPredicted RBP11.53□□□□□ -0.56
DNA2-202ENST00000399179 LOC105371045A0A1W2PR82 267 aa11.52□□□□□ -0.57
DNA2-202ENST00000399179 BCL11AQ9H165 835 aa11.5□□□□□ -0.57
DNA2-202ENST00000399179 FAM9AQ8IZU1 332 aaPredicted RBP11.39□□□□□ -0.59
DNA2-202ENST00000399179 DIEXFQ68CQ4 756 aaKnown RBP11.33□□□□□ -0.6
DNA2-202ENST00000399179 PRKCSHP14314 528 aaPredicted RBP11.31□□□□□ -0.6
DNA2-202ENST00000399179 ANP32EQ9BTT0 268 aa11.26□□□□□ -0.61
DNA2-202ENST00000399179 YTHDC1Q96MU7 727 aaKnown RBP11.19□□□□□ -0.62
DNA2-202ENST00000399179 ABCC9O60706 1549 aa11.16□□□□□ -0.62
DNA2-202ENST00000399179 CSRNP3Q8WYN3 585 aa11.15□□□□□ -0.62
DNA2-202ENST00000399179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.14□□□□□ -0.63
DNA2-202ENST00000399179 CCER1Q8TC90 406 aaPredicted RBP11.14□□□□□ -0.63
DNA2-202ENST00000399179 TRIM41Q8WV44 630 aa11.1□□□□□ -0.63
DNA2-202ENST00000399179 ERICH6Q7L0X2 663 aa11.07□□□□□ -0.64
DNA2-202ENST00000399179 TSHZ2Q9NRE2 1034 aa11.05□□□□□ -0.64
DNA2-202ENST00000399179 RSF1Q96T23 1441 aaPredicted RBP11.04□□□□□ -0.64
DNA2-202ENST00000399179 RB1CC1Q8TDY2 1594 aa11.03□□□□□ -0.64
DNA2-202ENST00000399179 DCAF8L2P0C7V8 631 aa11.03□□□□□ -0.64
DNA2-202ENST00000399179 ZNF316A6NFI3 1004 aaPredicted RBP11.01□□□□□ -0.65
DNA2-202ENST00000399179 MIER1Q8N108 512 aa10.99□□□□□ -0.65
DNA2-202ENST00000399179 SUPT16HQ9Y5B9 1047 aaKnown RBP10.99□□□□□ -0.65
DNA2-202ENST00000399179 WRNQ14191 1432 aaPredicted RBP eCLIP10.96□□□□□ -0.65
DNA2-202ENST00000399179 CLSPNQ9HAW4 1339 aa10.96□□□□□ -0.66
DNA2-202ENST00000399179 APLP2Q06481 763 aa10.93□□□□□ -0.66
DNA2-202ENST00000399179 EHMT2Q96KQ7 1210 aa10.87□□□□□ -0.67
DNA2-202ENST00000399179 EIF4G1Q04637 1599 aaKnown RBP10.8□□□□□ -0.68
DNA2-202ENST00000399179 RBM19Q9Y4C8 960 aaKnown RBP10.76□□□□□ -0.69
DNA2-202ENST00000399179 CEP162Q5TB80 1403 aa10.75□□□□□ -0.69
DNA2-202ENST00000399179 ANO8Q9HCE9 1232 aaPredicted RBP10.75□□□□□ -0.69
DNA2-202ENST00000399179 TNIKQ9UKE5 1360 aa10.74□□□□□ -0.69
DNA2-202ENST00000399179 SCRIBQ14160 1630 aa10.74□□□□□ -0.69
DNA2-202ENST00000399179 BCANQ96GW7 911 aa10.71□□□□□ -0.69
DNA2-202ENST00000399179 MSH5O43196 834 aa10.69□□□□□ -0.7
DNA2-202ENST00000399179 MROH2BQ7Z745 1585 aa10.67□□□□□ -0.7
DNA2-202ENST00000399179 BAZ1AQ9NRL2 1556 aaPredicted RBP10.66□□□□□ -0.7
DNA2-202ENST00000399179 EEA1Q15075 1411 aa10.65□□□□□ -0.7
DNA2-202ENST00000399179 WIZO95785 1651 aa10.64□□□□□ -0.71
DNA2-202ENST00000399179 CECR2Q9BXF3 1484 aa10.64□□□□□ -0.71
DNA2-202ENST00000399179 FKBP8Q14318 412 aa10.63□□□□□ -0.71
DNA2-202ENST00000399179 MYT1LQ9UL68 1186 aa10.63□□□□□ -0.71
DNA2-202ENST00000399179 DEKP35659 375 aaKnown RBP10.62□□□□□ -0.71
DNA2-202ENST00000399179 CCDC88BA6NC98 1476 aa10.61□□□□□ -0.71
DNA2-202ENST00000399179 SALL2Q9Y467 1007 aaPredicted RBP10.6□□□□□ -0.71
DNA2-202ENST00000399179 ABCC8Q09428 1581 aa10.57□□□□□ -0.72
DNA2-202ENST00000399179 FANCIQ9NVI1 1328 aa10.56□□□□□ -0.72
DNA2-202ENST00000399179 GOLGA3Q08378 1498 aa10.56□□□□□ -0.72
DNA2-202ENST00000399179 SOGA1O94964 1423 aa10.55□□□□□ -0.72
DNA2-202ENST00000399179 UBE2Q2Q8WVN8 375 aa10.55□□□□□ -0.72
DNA2-202ENST00000399179 NACADO15069 1562 aa10.55□□□□□ -0.72
DNA2-202ENST00000399179 ITGAEP38570 1179 aa10.55□□□□□ -0.72
DNA2-202ENST00000399179 CCDC136Q96JN2 1154 aa10.54□□□□□ -0.72
DNA2-202ENST00000399179 ERICH6BQ5W0A0 696 aa10.54□□□□□ -0.72
DNA2-202ENST00000399179 NEFLP07196 543 aa10.53□□□□□ -0.72
DNA2-202ENST00000399179 TOP2AP11388 1531 aaKnown RBP10.51□□□□□ -0.73
DNA2-202ENST00000399179 HNRNPUL2Q1KMD3 747 aaKnown RBP10.5□□□□□ -0.73
DNA2-202ENST00000399179 DHX57Q6P158 1386 aaKnown RBP10.5□□□□□ -0.73
DNA2-202ENST00000399179 KIF21BO75037 1637 aa10.49□□□□□ -0.73
DNA2-202ENST00000399179 KCNH8Q96L42 1107 aa10.49□□□□□ -0.73
DNA2-202ENST00000399179 VPS8Q8N3P4 1428 aa10.48□□□□□ -0.73
DNA2-202ENST00000399179 RUSC2Q8N2Y8 1516 aa10.47□□□□□ -0.73
DNA2-202ENST00000399179 CLIP1P30622 1438 aa10.46□□□□□ -0.73
DNA2-202ENST00000399179 SMARCA2P51531 1590 aa10.46□□□□□ -0.73
DNA2-202ENST00000399179 UBTFP17480 764 aaKnown RBP10.46□□□□□ -0.73
DNA2-202ENST00000399179 CEP164Q9UPV0 1460 aa10.46□□□□□ -0.74
DNA2-202ENST00000399179 BAZ1BQ9UIG0 1483 aaKnown RBP10.44□□□□□ -0.74
DNA2-202ENST00000399179 CUX2O14529 1486 aa10.44□□□□□ -0.74
DNA2-202ENST00000399179 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.43□□□□□ -0.74
DNA2-202ENST00000399179 CDK11AQ9UQ88 783 aaPredicted RBP10.43□□□□□ -0.74
DNA2-202ENST00000399179 NBR1Q14596 966 aa10.41□□□□□ -0.74
DNA2-202ENST00000399179 IL27Q8NEV9 243 aa10.39□□□□□ -0.75
DNA2-202ENST00000399179 RTN4Q9NQC3 1192 aaKnown RBP10.39□□□□□ -0.75
DNA2-202ENST00000399179 RRBP1Q9P2E9 1410 aaKnown RBP10.36□□□□□ -0.75
DNA2-202ENST00000399179 SMARCA4P51532 1647 aa10.35□□□□□ -0.75
DNA2-202ENST00000399179 NOP58Q9Y2X3 529 aaKnown RBP10.34□□□□□ -0.75
DNA2-202ENST00000399179 TRIM52Q96A61 297 aa10.33□□□□□ -0.76
DNA2-202ENST00000399179 EIF5BO60841 1220 aaKnown RBP10.33□□□□□ -0.76
DNA2-202ENST00000399179 CCER2I3L3R5 266 aa10.32□□□□□ -0.76
DNA2-202ENST00000399179 RTL5Q5HYW3 569 aaPredicted RBP10.31□□□□□ -0.76
DNA2-202ENST00000399179 PAK3O75914 559 aaPredicted RBP10.29□□□□□ -0.76
DNA2-202ENST00000399179 PKNOX2Q96KN3 472 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms