RNA–Protein interactions for RNA: ENST00000383772.8

RARB-202, Transcript of retinoic acid receptor beta, humanhuman

TSL 5

Gene RARB, Length 1,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-202ENST00000383772 CHIC1Q5VXU3 224 aa20.19■□□□□ 0.82
RARB-202ENST00000383772 AEBP2Q6ZN18 517 aaPredicted RBP19.98■□□□□ 0.79
RARB-202ENST00000383772 PHF23Q9BUL5 403 aaPredicted RBP17.72■□□□□ 0.43
RARB-202ENST00000383772 SENP3Q9H4L4 574 aaPredicted RBP17.05■□□□□ 0.32
RARB-202ENST00000383772 PLPPR3Q6T4P5 718 aa16.74■□□□□ 0.27
RARB-202ENST00000383772 FOXD1Q16676 465 aa15.62■□□□□ 0.09
RARB-202ENST00000383772 ADRA2BP18089 450 aa15.5■□□□□ 0.07
RARB-202ENST00000383772 PPP6R1Q9UPN7 881 aa15.42■□□□□ 0.06
RARB-202ENST00000383772 KCNA4P22459 653 aa15.03■□□□□ -0
RARB-202ENST00000383772 PIAS4Q8N2W9 510 aaPredicted RBP14.97□□□□□ -0.01
RARB-202ENST00000383772 POTEDQ86YR6 584 aa14.83□□□□□ -0.04
RARB-202ENST00000383772 PPP4R3CPQ6ZMV5 832 aa14.76□□□□□ -0.05
RARB-202ENST00000383772 EHMT2Q96KQ7 1210 aa14.75□□□□□ -0.05
RARB-202ENST00000383772 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
RARB-202ENST00000383772 NISCHQ9Y2I1 1504 aa14.57□□□□□ -0.08
RARB-202ENST00000383772 SLC4A1APQ9BWU0 796 aaKnown RBP14.51□□□□□ -0.09
RARB-202ENST00000383772 MSH5O43196 834 aa14.49□□□□□ -0.09
RARB-202ENST00000383772 SCAF1Q9H7N4 1312 aaKnown RBP14.39□□□□□ -0.11
RARB-202ENST00000383772 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
RARB-202ENST00000383772 CNKSR2Q8WXI2 1034 aa14.26□□□□□ -0.13
RARB-202ENST00000383772 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
RARB-202ENST00000383772 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
RARB-202ENST00000383772 RNF216Q9NWF9 866 aaPredicted RBP13.83□□□□□ -0.2
RARB-202ENST00000383772 DNAJC5BQ9UF47 199 aa13.83□□□□□ -0.2
RARB-202ENST00000383772 ZBTB22O15209 634 aa13.78□□□□□ -0.2
RARB-202ENST00000383772 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
RARB-202ENST00000383772 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
RARB-202ENST00000383772 ABCC9O60706 1549 aa13.6□□□□□ -0.23
RARB-202ENST00000383772 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.24
RARB-202ENST00000383772 SLC4A2P04920 1241 aa13.31□□□□□ -0.28
RARB-202ENST00000383772 MYCNP04198 464 aaPredicted RBP13.3□□□□□ -0.28
RARB-202ENST00000383772 CCDC180Q9P1Z9 1646 aa13.3□□□□□ -0.28
RARB-202ENST00000383772 ATXN8OSP0DMR3 200 aa13.26□□□□□ -0.29
RARB-202ENST00000383772 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
RARB-202ENST00000383772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.04□□□□□ -0.32
RARB-202ENST00000383772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.01□□□□□ -0.33
RARB-202ENST00000383772 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
RARB-202ENST00000383772 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
RARB-202ENST00000383772 FKBP8Q14318 412 aa12.91□□□□□ -0.34
RARB-202ENST00000383772 AMER1Q5JTC6 1135 aaPredicted RBP12.87□□□□□ -0.35
RARB-202ENST00000383772 RB1CC1Q8TDY2 1594 aa12.83□□□□□ -0.36
RARB-202ENST00000383772 APLP2Q06481 763 aa12.79□□□□□ -0.36
RARB-202ENST00000383772 U3KPZ7 1027 aaPredicted RBP12.79□□□□□ -0.36
RARB-202ENST00000383772 ATF5Q9Y2D1 282 aaPredicted RBP12.73□□□□□ -0.37
RARB-202ENST00000383772 RTN4Q9NQC3 1192 aaKnown RBP12.72□□□□□ -0.37
RARB-202ENST00000383772 NACADO15069 1562 aa12.62□□□□□ -0.39
RARB-202ENST00000383772 CACNB1Q02641 598 aaPredicted RBP12.62□□□□□ -0.39
RARB-202ENST00000383772 ZNF219Q9P2Y4 722 aaPredicted RBP12.59□□□□□ -0.39
RARB-202ENST00000383772 PABPN1Q86U42 306 aaKnown RBP eCLIP12.58□□□□□ -0.4
RARB-202ENST00000383772 UNC13AQ9UPW8 1703 aa12.54□□□□□ -0.4
RARB-202ENST00000383772 SLC24A1O60721 1099 aa12.54□□□□□ -0.4
RARB-202ENST00000383772 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
RARB-202ENST00000383772 FBXO3Q9UK99 471 aa12.41□□□□□ -0.42
RARB-202ENST00000383772 BICRAQ9NZM4 1560 aa12.39□□□□□ -0.43
RARB-202ENST00000383772 FBLN2P98095 1184 aa12.38□□□□□ -0.43
RARB-202ENST00000383772 SPDYE4A6NLX3 237 aa12.36□□□□□ -0.43
RARB-202ENST00000383772 RNF39Q9H2S5 420 aa12.34□□□□□ -0.43
RARB-202ENST00000383772 TRHP20396 242 aaPredicted RBP12.33□□□□□ -0.44
RARB-202ENST00000383772 CECR2Q9BXF3 1484 aa12.28□□□□□ -0.44
RARB-202ENST00000383772 MYO15BQ96JP2 1530 aa12.28□□□□□ -0.44
RARB-202ENST00000383772 CC2D2AQ9P2K1 1620 aa12.27□□□□□ -0.44
RARB-202ENST00000383772 CAPN15O75808 1086 aa12.27□□□□□ -0.45
RARB-202ENST00000383772 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
RARB-202ENST00000383772 POLA2Q14181 598 aa12.23□□□□□ -0.45
RARB-202ENST00000383772 SPINK5Q9NQ38 1064 aaPredicted RBP12.23□□□□□ -0.45
RARB-202ENST00000383772 SHROOM4Q9ULL8 1493 aa12.22□□□□□ -0.45
RARB-202ENST00000383772 ZBTB12Q9Y330 459 aaPredicted RBP12.22□□□□□ -0.45
RARB-202ENST00000383772 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
RARB-202ENST00000383772 DNAJC5Q9H3Z4 198 aa12.2□□□□□ -0.46
RARB-202ENST00000383772 EIF4G1Q04637 1599 aaKnown RBP12.15□□□□□ -0.46
RARB-202ENST00000383772 PROM2Q8N271 834 aa12.15□□□□□ -0.46
RARB-202ENST00000383772 VASPP50552 380 aaPredicted RBP12.12□□□□□ -0.47
RARB-202ENST00000383772 SCRIBQ14160 1630 aa12.1□□□□□ -0.47
RARB-202ENST00000383772 ABCB7O75027 752 aa12.03□□□□□ -0.48
RARB-202ENST00000383772 DCAF1Q9Y4B6 1507 aa12.01□□□□□ -0.49
RARB-202ENST00000383772 ZCCHC6Q5VYS8 1495 aaKnown RBP12□□□□□ -0.49
RARB-202ENST00000383772 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
RARB-202ENST00000383772 ZNF692Q9BU19 519 aaPredicted RBP11.89□□□□□ -0.51
RARB-202ENST00000383772 CUX2O14529 1486 aa11.87□□□□□ -0.51
RARB-202ENST00000383772 KLHL34Q8N239 644 aa11.86□□□□□ -0.51
RARB-202ENST00000383772 STAG3Q9UJ98 1225 aa11.86□□□□□ -0.51
RARB-202ENST00000383772 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
RARB-202ENST00000383772 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
RARB-202ENST00000383772 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
RARB-202ENST00000383772 DSG3P32926 999 aa11.84□□□□□ -0.51
RARB-202ENST00000383772 ERCC6Q03468 1493 aa11.83□□□□□ -0.52
RARB-202ENST00000383772 PLCB2Q00722 1185 aa11.81□□□□□ -0.52
RARB-202ENST00000383772 SPOCK2Q92563 424 aa11.8□□□□□ -0.52
RARB-202ENST00000383772 OSCARQ8IYS5 282 aa11.79□□□□□ -0.52
RARB-202ENST00000383772 PLCD3Q8N3E9 789 aa11.77□□□□□ -0.53
RARB-202ENST00000383772 SSUH2Q9Y2M2 353 aa11.76□□□□□ -0.53
RARB-202ENST00000383772 PKD2Q13563 968 aa11.75□□□□□ -0.53
RARB-202ENST00000383772 PLEKHG5O94827 1062 aa11.72□□□□□ -0.53
RARB-202ENST00000383772 MIER1Q8N108 512 aa11.69□□□□□ -0.54
RARB-202ENST00000383772 HAP1P54257 671 aaPredicted RBP11.68□□□□□ -0.54
RARB-202ENST00000383772 ECM2O94769 699 aaPredicted RBP11.67□□□□□ -0.54
RARB-202ENST00000383772 ZBTB47Q9UFB7 747 aaPredicted RBP11.67□□□□□ -0.54
RARB-202ENST00000383772 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.64□□□□□ -0.55
RARB-202ENST00000383772 TRIM41Q8WV44 630 aa11.61□□□□□ -0.55
RARB-202ENST00000383772 NCAPD3P42695 1498 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms