RNA–Protein interactions for RNA: ENST00000373677.1

NHSL2-201, Transcript of NHS like 2, humanhuman

TSL 1 (best)

Gene NHSL2, Length 3,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHSL2-201ENST00000373677 NISCHQ9Y2I1 1504 aa15.26■□□□□ 0.03
NHSL2-201ENST00000373677 SUPT5HO00267 1087 aaKnown RBP14.47□□□□□ -0.09
NHSL2-201ENST00000373677 DCAF8L2P0C7V8 631 aa14.39□□□□□ -0.11
NHSL2-201ENST00000373677 SHROOM4Q9ULL8 1493 aa14.37□□□□□ -0.11
NHSL2-201ENST00000373677 PCGF6Q9BYE7 350 aa13.97□□□□□ -0.17
NHSL2-201ENST00000373677 EHMT2Q96KQ7 1210 aa13.74□□□□□ -0.21
NHSL2-201ENST00000373677 HRCP23327 699 aa13.7□□□□□ -0.22
NHSL2-201ENST00000373677 PPARGC1BQ86YN6 1023 aaKnown RBP13.57□□□□□ -0.24
NHSL2-201ENST00000373677 FAM9AQ8IZU1 332 aaPredicted RBP13.54□□□□□ -0.24
NHSL2-201ENST00000373677 CHIC1Q5VXU3 224 aa13.51□□□□□ -0.25
NHSL2-201ENST00000373677 LOC105371045A0A1W2PR82 267 aa13.44□□□□□ -0.26
NHSL2-201ENST00000373677 ZEB1P37275 1124 aaPredicted RBP13.34□□□□□ -0.27
NHSL2-201ENST00000373677 TRIM26Q12899 539 aaPredicted RBP13.33□□□□□ -0.27
NHSL2-201ENST00000373677 TTBK1Q5TCY1 1321 aaPredicted RBP13.33□□□□□ -0.28
NHSL2-201ENST00000373677 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
NHSL2-201ENST00000373677 PELP1Q8IZL8 1130 aaKnown RBP13.3□□□□□ -0.28
NHSL2-201ENST00000373677 CCER1Q8TC90 406 aaPredicted RBP13.22□□□□□ -0.29
NHSL2-201ENST00000373677 CENPBP07199 599 aaPredicted RBP13.15□□□□□ -0.3
NHSL2-201ENST00000373677 ABCC9O60706 1549 aa13.11□□□□□ -0.31
NHSL2-201ENST00000373677 YTHDC1Q96MU7 727 aaKnown RBP13.05□□□□□ -0.32
NHSL2-201ENST00000373677 MYO15BQ96JP2 1530 aa13.02□□□□□ -0.32
NHSL2-201ENST00000373677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
NHSL2-201ENST00000373677 APLP2Q06481 763 aa12.94□□□□□ -0.34
NHSL2-201ENST00000373677 RANGAP1P46060 587 aaPredicted RBP12.91□□□□□ -0.34
NHSL2-201ENST00000373677 UBTFP17480 764 aaKnown RBP12.89□□□□□ -0.35
NHSL2-201ENST00000373677 DIEXFQ68CQ4 756 aaKnown RBP12.86□□□□□ -0.35
NHSL2-201ENST00000373677 DCAF1Q9Y4B6 1507 aa12.84□□□□□ -0.35
NHSL2-201ENST00000373677 MYT1Q01538 1121 aa12.82□□□□□ -0.36
NHSL2-201ENST00000373677 GTF3C3Q9Y5Q9 886 aa12.82□□□□□ -0.36
NHSL2-201ENST00000373677 ZCCHC6Q5VYS8 1495 aaKnown RBP12.8□□□□□ -0.36
NHSL2-201ENST00000373677 SCAF1Q9H7N4 1312 aaKnown RBP12.79□□□□□ -0.36
NHSL2-201ENST00000373677 ACIN1Q9UKV3 1341 aaKnown RBP12.74□□□□□ -0.37
NHSL2-201ENST00000373677 HNRNPUL2Q1KMD3 747 aaKnown RBP12.73□□□□□ -0.37
NHSL2-201ENST00000373677 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
NHSL2-201ENST00000373677 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
NHSL2-201ENST00000373677 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
NHSL2-201ENST00000373677 ITGAEP38570 1179 aa12.52□□□□□ -0.4
NHSL2-201ENST00000373677 CCDC180Q9P1Z9 1646 aa12.51□□□□□ -0.41
NHSL2-201ENST00000373677 NEFLP07196 543 aa12.49□□□□□ -0.41
NHSL2-201ENST00000373677 ATP1B4Q9UN42 357 aaPredicted RBP12.48□□□□□ -0.41
NHSL2-201ENST00000373677 ERICH6Q7L0X2 663 aa12.47□□□□□ -0.41
NHSL2-201ENST00000373677 BCANQ96GW7 911 aa12.39□□□□□ -0.43
NHSL2-201ENST00000373677 SCRIBQ14160 1630 aa12.38□□□□□ -0.43
NHSL2-201ENST00000373677 MIER1Q8N108 512 aa12.36□□□□□ -0.43
NHSL2-201ENST00000373677 CSRNP3Q8WYN3 585 aa12.35□□□□□ -0.43
NHSL2-201ENST00000373677 RSF1Q96T23 1441 aaPredicted RBP12.35□□□□□ -0.43
NHSL2-201ENST00000373677 CNGB1Q14028 1251 aaPredicted RBP12.17□□□□□ -0.46
NHSL2-201ENST00000373677 FAM50AQ14320 339 aaKnown RBP12.17□□□□□ -0.46
NHSL2-201ENST00000373677 CEP162Q5TB80 1403 aa12.17□□□□□ -0.46
NHSL2-201ENST00000373677 RB1CC1Q8TDY2 1594 aa12.14□□□□□ -0.47
NHSL2-201ENST00000373677 FKBP8Q14318 412 aa12.13□□□□□ -0.47
NHSL2-201ENST00000373677 ANP32CO43423 234 aa12.09□□□□□ -0.47
NHSL2-201ENST00000373677 POLR3GLQ9BT43 218 aa12.09□□□□□ -0.47
NHSL2-201ENST00000373677 DDX10Q13206 875 aaKnown RBP12.08□□□□□ -0.48
NHSL2-201ENST00000373677 CECR2Q9BXF3 1484 aa12.08□□□□□ -0.48
NHSL2-201ENST00000373677 CLSPNQ9HAW4 1339 aa12.07□□□□□ -0.48
NHSL2-201ENST00000373677 TRIM52Q96A61 297 aa12.04□□□□□ -0.48
NHSL2-201ENST00000373677 CLIP1P30622 1438 aa12.03□□□□□ -0.48
NHSL2-201ENST00000373677 TNIKQ9UKE5 1360 aa12.03□□□□□ -0.48
NHSL2-201ENST00000373677 SUPT16HQ9Y5B9 1047 aaKnown RBP12.02□□□□□ -0.49
NHSL2-201ENST00000373677 CDK11AQ9UQ88 783 aaPredicted RBP12.01□□□□□ -0.49
NHSL2-201ENST00000373677 HIRIP3Q9BW71 556 aaPredicted RBP12.01□□□□□ -0.49
NHSL2-201ENST00000373677 SOGA1O94964 1423 aa12□□□□□ -0.49
NHSL2-201ENST00000373677 P3H3Q8IVL6 736 aa11.99□□□□□ -0.49
NHSL2-201ENST00000373677 GOLGA3Q08378 1498 aa11.97□□□□□ -0.49
NHSL2-201ENST00000373677 ANP32EQ9BTT0 268 aa11.95□□□□□ -0.5
NHSL2-201ENST00000373677 MROH2BQ7Z745 1585 aa11.95□□□□□ -0.5
NHSL2-201ENST00000373677 CCDC88BA6NC98 1476 aa11.93□□□□□ -0.5
NHSL2-201ENST00000373677 EEA1Q15075 1411 aa11.93□□□□□ -0.5
NHSL2-201ENST00000373677 ABCC8Q09428 1581 aa11.93□□□□□ -0.5
NHSL2-201ENST00000373677 HNRNPUQ00839 825 aaKnown RBP eCLIP11.93□□□□□ -0.5
NHSL2-201ENST00000373677 NACADO15069 1562 aa11.92□□□□□ -0.5
NHSL2-201ENST00000373677 IRX6P78412 446 aaPredicted RBP11.92□□□□□ -0.5
NHSL2-201ENST00000373677 RTL5Q5HYW3 569 aaPredicted RBP11.91□□□□□ -0.5
NHSL2-201ENST00000373677 DNAJC5BQ9UF47 199 aa11.89□□□□□ -0.51
NHSL2-201ENST00000373677 WRNQ14191 1432 aaPredicted RBP eCLIP11.88□□□□□ -0.51
NHSL2-201ENST00000373677 TSHZ2Q9NRE2 1034 aa11.85□□□□□ -0.51
NHSL2-201ENST00000373677 TONSLQ96HA7 1378 aa11.84□□□□□ -0.51
NHSL2-201ENST00000373677 CEP164Q9UPV0 1460 aa11.84□□□□□ -0.51
NHSL2-201ENST00000373677 WIZO95785 1651 aa11.84□□□□□ -0.51
NHSL2-201ENST00000373677 FAM9BQ8IZU0 186 aa11.82□□□□□ -0.52
NHSL2-201ENST00000373677 SIN3AQ96ST3 1273 aa11.82□□□□□ -0.52
NHSL2-201ENST00000373677 ZNF326Q5BKZ1 582 aaKnown RBP11.82□□□□□ -0.52
NHSL2-201ENST00000373677 DAXXQ9UER7 740 aaPredicted RBP11.82□□□□□ -0.52
NHSL2-201ENST00000373677 BAZ1AQ9NRL2 1556 aaPredicted RBP11.8□□□□□ -0.52
NHSL2-201ENST00000373677 KCNH8Q96L42 1107 aa11.79□□□□□ -0.52
NHSL2-201ENST00000373677 RUSC2Q8N2Y8 1516 aa11.79□□□□□ -0.52
NHSL2-201ENST00000373677 NBR1Q14596 966 aa11.78□□□□□ -0.52
NHSL2-201ENST00000373677 KANK4Q5T7N3 995 aaPredicted RBP11.78□□□□□ -0.52
NHSL2-201ENST00000373677 VPS8Q8N3P4 1428 aa11.78□□□□□ -0.52
NHSL2-201ENST00000373677 BCL11AQ9H165 835 aa11.78□□□□□ -0.52
NHSL2-201ENST00000373677 ARID3CA6NKF2 412 aa11.77□□□□□ -0.52
NHSL2-201ENST00000373677 RBM19Q9Y4C8 960 aaKnown RBP11.76□□□□□ -0.53
NHSL2-201ENST00000373677 NPM2Q86SE8 214 aaKnown RBP11.74□□□□□ -0.53
NHSL2-201ENST00000373677 ANP32AP39687 249 aaKnown RBP11.73□□□□□ -0.53
NHSL2-201ENST00000373677 CHIC2Q9UKJ5 165 aa11.72□□□□□ -0.53
NHSL2-201ENST00000373677 CCNB3Q8WWL7 1395 aa11.71□□□□□ -0.53
NHSL2-201ENST00000373677 MRS2Q9HD23 443 aa11.71□□□□□ -0.54
NHSL2-201ENST00000373677 SENP3-EIF4A1A0A087X0R7 540 aa11.7□□□□□ -0.54
NHSL2-201ENST00000373677 DHX57Q6P158 1386 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms