RNA–Protein interactions for RNA: ENST00000358062.6

DMD-204, Transcript of dystrophin, humanhuman

TSL 5

Gene DMD, Length 6,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-204ENST00000358062 DCAF8L2P0C7V8 631 aa12.14□□□□□ -0.47
DMD-204ENST00000358062 NISCHQ9Y2I1 1504 aa11.31□□□□□ -0.6
DMD-204ENST00000358062 SUPT5HO00267 1087 aaKnown RBP11.22□□□□□ -0.61
DMD-204ENST00000358062 FAM9AQ8IZU1 332 aaPredicted RBP11.17□□□□□ -0.62
DMD-204ENST00000358062 APLP2Q06481 763 aa11.01□□□□□ -0.65
DMD-204ENST00000358062 SHROOM4Q9ULL8 1493 aa11□□□□□ -0.65
DMD-204ENST00000358062 EHMT2Q96KQ7 1210 aa10.86□□□□□ -0.67
DMD-204ENST00000358062 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
DMD-204ENST00000358062 ATP1B4Q9UN42 357 aaPredicted RBP10.59□□□□□ -0.71
DMD-204ENST00000358062 RANGAP1P46060 587 aaPredicted RBP10.53□□□□□ -0.72
DMD-204ENST00000358062 TTBK1Q5TCY1 1321 aaPredicted RBP10.49□□□□□ -0.73
DMD-204ENST00000358062 TRIM41Q8WV44 630 aa10.48□□□□□ -0.73
DMD-204ENST00000358062 UBTFP17480 764 aaKnown RBP10.44□□□□□ -0.74
DMD-204ENST00000358062 MYT1LQ9UL68 1186 aa10.4□□□□□ -0.74
DMD-204ENST00000358062 CCER1Q8TC90 406 aaPredicted RBP10.37□□□□□ -0.75
DMD-204ENST00000358062 PCGF6Q9BYE7 350 aa10.34□□□□□ -0.75
DMD-204ENST00000358062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.31□□□□□ -0.76
DMD-204ENST00000358062 ZEB1P37275 1124 aaPredicted RBP10.31□□□□□ -0.76
DMD-204ENST00000358062 HNRNPUL2Q1KMD3 747 aaKnown RBP10.31□□□□□ -0.76
DMD-204ENST00000358062 ERICH6Q7L0X2 663 aa10.29□□□□□ -0.76
DMD-204ENST00000358062 CENPBP07199 599 aaPredicted RBP10.25□□□□□ -0.77
DMD-204ENST00000358062 NEFLP07196 543 aa10.2□□□□□ -0.78
DMD-204ENST00000358062 CHIC1Q5VXU3 224 aa10.07□□□□□ -0.8
DMD-204ENST00000358062 POLR3GLQ9BT43 218 aa10.06□□□□□ -0.8
DMD-204ENST00000358062 ITGAEP38570 1179 aa10.04□□□□□ -0.8
DMD-204ENST00000358062 SLC4A1APQ9BWU0 796 aaKnown RBP10.03□□□□□ -0.8
DMD-204ENST00000358062 ABCC9O60706 1549 aa10.02□□□□□ -0.81
DMD-204ENST00000358062 DAXXQ9UER7 740 aaPredicted RBP9.99□□□□□ -0.81
DMD-204ENST00000358062 PABPN1Q86U42 306 aaKnown RBP eCLIP9.95□□□□□ -0.82
DMD-204ENST00000358062 PPARGC1BQ86YN6 1023 aaKnown RBP9.93□□□□□ -0.82
DMD-204ENST00000358062 YTHDC1Q96MU7 727 aaKnown RBP9.92□□□□□ -0.82
DMD-204ENST00000358062 FBLN2P98095 1184 aa9.92□□□□□ -0.82
DMD-204ENST00000358062 TRIM26Q12899 539 aaPredicted RBP9.9□□□□□ -0.82
DMD-204ENST00000358062 FAM50AQ14320 339 aaKnown RBP9.86□□□□□ -0.83
DMD-204ENST00000358062 TRIM52Q96A61 297 aa9.86□□□□□ -0.83
DMD-204ENST00000358062 BCANQ96GW7 911 aa9.82□□□□□ -0.84
DMD-204ENST00000358062 CNGB1Q14028 1251 aaPredicted RBP9.82□□□□□ -0.84
DMD-204ENST00000358062 ESF1Q9H501 851 aaKnown RBP9.82□□□□□ -0.84
DMD-204ENST00000358062 CLSPNQ9HAW4 1339 aa9.78□□□□□ -0.84
DMD-204ENST00000358062 ZBTB47Q9UFB7 747 aaPredicted RBP9.77□□□□□ -0.85
DMD-204ENST00000358062 NEFMP07197 916 aa9.76□□□□□ -0.85
DMD-204ENST00000358062 NPM1P06748 294 aaKnown RBP eCLIP9.76□□□□□ -0.85
DMD-204ENST00000358062 CDK11AQ9UQ88 783 aaPredicted RBP9.74□□□□□ -0.85
DMD-204ENST00000358062 ZNF316A6NFI3 1004 aaPredicted RBP9.71□□□□□ -0.85
DMD-204ENST00000358062 SLC24A1O60721 1099 aa9.71□□□□□ -0.86
DMD-204ENST00000358062 ZNF326Q5BKZ1 582 aaKnown RBP9.7□□□□□ -0.86
DMD-204ENST00000358062 LOC105371045A0A1W2PR82 267 aa9.68□□□□□ -0.86
DMD-204ENST00000358062 STAG3Q9UJ98 1225 aa9.67□□□□□ -0.86
DMD-204ENST00000358062 NEUROD1Q13562 356 aa9.65□□□□□ -0.86
DMD-204ENST00000358062 ZNF777Q9ULD5 760 aaPredicted RBP9.63□□□□□ -0.87
DMD-204ENST00000358062 HRCP23327 699 aa9.63□□□□□ -0.87
DMD-204ENST00000358062 MYT1Q01538 1121 aa9.62□□□□□ -0.87
DMD-204ENST00000358062 CANXP27824 592 aaKnown RBP9.61□□□□□ -0.87
DMD-204ENST00000358062 ARID3CA6NKF2 412 aa9.6□□□□□ -0.87
DMD-204ENST00000358062 ANP32CO43423 234 aa9.58□□□□□ -0.88
DMD-204ENST00000358062 P3H3Q8IVL6 736 aa9.58□□□□□ -0.88
DMD-204ENST00000358062 RTL5Q5HYW3 569 aaPredicted RBP9.58□□□□□ -0.88
DMD-204ENST00000358062 PLPPR3Q6T4P5 718 aa9.57□□□□□ -0.88
DMD-204ENST00000358062 CHGAP10645 457 aaKnown RBP9.56□□□□□ -0.88
DMD-204ENST00000358062 SCRIBQ14160 1630 aa9.55□□□□□ -0.88
DMD-204ENST00000358062 CSRNP3Q8WYN3 585 aa9.53□□□□□ -0.88
DMD-204ENST00000358062 DIEXFQ68CQ4 756 aaKnown RBP9.5□□□□□ -0.89
DMD-204ENST00000358062 CHMP7Q8WUX9 453 aaPredicted RBP9.49□□□□□ -0.89
DMD-204ENST00000358062 BCL11AQ9H165 835 aa9.46□□□□□ -0.9
DMD-204ENST00000358062 TSPY4P0CV99 314 aa9.44□□□□□ -0.9
DMD-204ENST00000358062 TSPY10P0CW01 314 aa9.44□□□□□ -0.9
DMD-204ENST00000358062 SCAF1Q9H7N4 1312 aaKnown RBP9.44□□□□□ -0.9
DMD-204ENST00000358062 NPM2Q86SE8 214 aaKnown RBP9.43□□□□□ -0.9
DMD-204ENST00000358062 RB1CC1Q8TDY2 1594 aa9.42□□□□□ -0.9
DMD-204ENST00000358062 TONSLQ96HA7 1378 aa9.41□□□□□ -0.9
DMD-204ENST00000358062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.4□□□□□ -0.9
DMD-204ENST00000358062 PPP1R15AO75807 674 aaPredicted RBP9.39□□□□□ -0.91
DMD-204ENST00000358062 C14orf37Q86TY3 774 aa9.38□□□□□ -0.91
DMD-204ENST00000358062 CCDC180Q9P1Z9 1646 aa9.38□□□□□ -0.91
DMD-204ENST00000358062 A0A0G2JS52 829 aa9.37□□□□□ -0.91
DMD-204ENST00000358062 ARID4BQ4LE39 1312 aaPredicted RBP9.36□□□□□ -0.91
DMD-204ENST00000358062 MTUS2Q5JR59 1369 aa9.36□□□□□ -0.91
DMD-204ENST00000358062 HAP1P54257 671 aaPredicted RBP9.35□□□□□ -0.91
DMD-204ENST00000358062 ACIN1Q9UKV3 1341 aaKnown RBP9.35□□□□□ -0.91
DMD-204ENST00000358062 ERCC6Q03468 1493 aa9.34□□□□□ -0.91
DMD-204ENST00000358062 PLEKHD1A6NEE1 506 aa9.33□□□□□ -0.92
DMD-204ENST00000358062 UPF2Q9HAU5 1272 aaKnown RBP9.31□□□□□ -0.92
DMD-204ENST00000358062 KCNH8Q96L42 1107 aa9.3□□□□□ -0.92
DMD-204ENST00000358062 HSP90AA1P07900 732 aaKnown RBP9.3□□□□□ -0.92
DMD-204ENST00000358062 WDR43Q15061 677 aaKnown RBP eCLIP9.3□□□□□ -0.92
DMD-204ENST00000358062 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.3□□□□□ -0.92
DMD-204ENST00000358062 CHIC2Q9UKJ5 165 aa9.3□□□□□ -0.92
DMD-204ENST00000358062 ZCCHC6Q5VYS8 1495 aaKnown RBP9.3□□□□□ -0.92
DMD-204ENST00000358062 RSF1Q96T23 1441 aaPredicted RBP9.3□□□□□ -0.92
DMD-204ENST00000358062 ZBTB7CA1YPR0 619 aa9.29□□□□□ -0.92
DMD-204ENST00000358062 ANP32AP39687 249 aaKnown RBP9.28□□□□□ -0.92
DMD-204ENST00000358062 ANP32BQ92688 251 aaKnown RBP9.28□□□□□ -0.92
DMD-204ENST00000358062 MYH16Q9H6N6 1097 aa9.26□□□□□ -0.93
DMD-204ENST00000358062 KDM2AQ9Y2K7 1162 aa9.25□□□□□ -0.93
DMD-204ENST00000358062 TMC1Q8TDI8 760 aa9.24□□□□□ -0.93
DMD-204ENST00000358062 NACADO15069 1562 aa9.24□□□□□ -0.93
DMD-204ENST00000358062 TRHP20396 242 aaPredicted RBP9.24□□□□□ -0.93
DMD-204ENST00000358062 BAZ1BQ9UIG0 1483 aaKnown RBP9.24□□□□□ -0.93
DMD-204ENST00000358062 CDK11BP21127 795 aaKnown RBP9.23□□□□□ -0.93
DMD-204ENST00000358062 CDCA8Q53HL2 280 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms