RNA–Protein interactions for RNA: ENST00000355452.5

LAMC3-201, Transcript of laminin subunit gamma 3, humanhuman

TSL 1 (best)

Gene LAMC3, Length 3,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC3-201ENST00000355452 NISCHQ9Y2I1 1504 aa21.58■■□□□ 1.04
LAMC3-201ENST00000355452 PELP1Q8IZL8 1130 aaKnown RBP21.56■■□□□ 1.04
LAMC3-201ENST00000355452 HRCP23327 699 aa21.51■■□□□ 1.03
LAMC3-201ENST00000355452 PPARGC1BQ86YN6 1023 aaKnown RBP21.34■■□□□ 1.01
LAMC3-201ENST00000355452 PCGF6Q9BYE7 350 aa21.2■□□□□ 0.98
LAMC3-201ENST00000355452 MYT1Q01538 1121 aa20.85■□□□□ 0.93
LAMC3-201ENST00000355452 SUPT5HO00267 1087 aaKnown RBP20.79■□□□□ 0.92
LAMC3-201ENST00000355452 SCAF1Q9H7N4 1312 aaKnown RBP20.69■□□□□ 0.9
LAMC3-201ENST00000355452 SHROOM4Q9ULL8 1493 aa20.53■□□□□ 0.88
LAMC3-201ENST00000355452 CHIC1Q5VXU3 224 aa20.13■□□□□ 0.81
LAMC3-201ENST00000355452 GTF3C3Q9Y5Q9 886 aa20.11■□□□□ 0.81
LAMC3-201ENST00000355452 MYO15BQ96JP2 1530 aa20.09■□□□□ 0.81
LAMC3-201ENST00000355452 ZEB1P37275 1124 aaPredicted RBP20.09■□□□□ 0.81
LAMC3-201ENST00000355452 TRIM26Q12899 539 aaPredicted RBP20.08■□□□□ 0.81
LAMC3-201ENST00000355452 ACIN1Q9UKV3 1341 aaKnown RBP20.06■□□□□ 0.8
LAMC3-201ENST00000355452 NEUROD1Q13562 356 aa20.04■□□□□ 0.8
LAMC3-201ENST00000355452 LOC105371045A0A1W2PR82 267 aa20.03■□□□□ 0.8
LAMC3-201ENST00000355452 CENPBP07199 599 aaPredicted RBP19.97■□□□□ 0.79
LAMC3-201ENST00000355452 YTHDC1Q96MU7 727 aaKnown RBP19.73■□□□□ 0.75
LAMC3-201ENST00000355452 DCAF1Q9Y4B6 1507 aa19.67■□□□□ 0.74
LAMC3-201ENST00000355452 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
LAMC3-201ENST00000355452 BCL11AQ9H165 835 aa19.59■□□□□ 0.73
LAMC3-201ENST00000355452 DIEXFQ68CQ4 756 aaKnown RBP19.59■□□□□ 0.73
LAMC3-201ENST00000355452 CCER1Q8TC90 406 aaPredicted RBP19.52■□□□□ 0.72
LAMC3-201ENST00000355452 TTBK1Q5TCY1 1321 aaPredicted RBP19.52■□□□□ 0.71
LAMC3-201ENST00000355452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.45■□□□□ 0.7
LAMC3-201ENST00000355452 CCDC180Q9P1Z9 1646 aa19.39■□□□□ 0.69
LAMC3-201ENST00000355452 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
LAMC3-201ENST00000355452 DCAF8L2P0C7V8 631 aa19.34■□□□□ 0.69
LAMC3-201ENST00000355452 ANP32EQ9BTT0 268 aa19.21■□□□□ 0.67
LAMC3-201ENST00000355452 CSRNP3Q8WYN3 585 aa19.1■□□□□ 0.65
LAMC3-201ENST00000355452 PRKCSHP14314 528 aaPredicted RBP19.09■□□□□ 0.65
LAMC3-201ENST00000355452 MIER1Q8N108 512 aa18.99■□□□□ 0.63
LAMC3-201ENST00000355452 ZNF316A6NFI3 1004 aaPredicted RBP18.98■□□□□ 0.63
LAMC3-201ENST00000355452 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
LAMC3-201ENST00000355452 TSHZ2Q9NRE2 1034 aa18.87■□□□□ 0.61
LAMC3-201ENST00000355452 BCANQ96GW7 911 aa18.86■□□□□ 0.61
LAMC3-201ENST00000355452 SUPT16HQ9Y5B9 1047 aaKnown RBP18.83■□□□□ 0.6
LAMC3-201ENST00000355452 ERICH6Q7L0X2 663 aa18.73■□□□□ 0.59
LAMC3-201ENST00000355452 CLSPNQ9HAW4 1339 aa18.53■□□□□ 0.56
LAMC3-201ENST00000355452 HNRNPUL2Q1KMD3 747 aaKnown RBP18.51■□□□□ 0.55
LAMC3-201ENST00000355452 FKBP8Q14318 412 aa18.49■□□□□ 0.55
LAMC3-201ENST00000355452 RBM19Q9Y4C8 960 aaKnown RBP18.47■□□□□ 0.55
LAMC3-201ENST00000355452 NEFLP07196 543 aa18.46■□□□□ 0.55
LAMC3-201ENST00000355452 ITGAEP38570 1179 aa18.44■□□□□ 0.54
LAMC3-201ENST00000355452 ANO8Q9HCE9 1232 aaPredicted RBP18.42■□□□□ 0.54
LAMC3-201ENST00000355452 ZCCHC6Q5VYS8 1495 aaKnown RBP18.32■□□□□ 0.52
LAMC3-201ENST00000355452 DEKP35659 375 aaKnown RBP18.28■□□□□ 0.52
LAMC3-201ENST00000355452 CCDC136Q96JN2 1154 aa18.27■□□□□ 0.52
LAMC3-201ENST00000355452 MSH5O43196 834 aa18.21■□□□□ 0.51
LAMC3-201ENST00000355452 NBR1Q14596 966 aa18.2■□□□□ 0.5
LAMC3-201ENST00000355452 KCNH8Q96L42 1107 aa18.17■□□□□ 0.5
LAMC3-201ENST00000355452 RTN4Q9NQC3 1192 aaKnown RBP18.16■□□□□ 0.5
LAMC3-201ENST00000355452 SALL2Q9Y467 1007 aaPredicted RBP18.15■□□□□ 0.5
LAMC3-201ENST00000355452 APLP2Q06481 763 aa18.14■□□□□ 0.5
LAMC3-201ENST00000355452 UBTFP17480 764 aaKnown RBP18.14■□□□□ 0.49
LAMC3-201ENST00000355452 CDK11AQ9UQ88 783 aaPredicted RBP18.13■□□□□ 0.49
LAMC3-201ENST00000355452 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.12■□□□□ 0.49
LAMC3-201ENST00000355452 TRIM52Q96A61 297 aa18.08■□□□□ 0.48
LAMC3-201ENST00000355452 MYT1LQ9UL68 1186 aa18.07■□□□□ 0.48
LAMC3-201ENST00000355452 IRX6P78412 446 aaPredicted RBP18.05■□□□□ 0.48
LAMC3-201ENST00000355452 EIF5BO60841 1220 aaKnown RBP18.01■□□□□ 0.47
LAMC3-201ENST00000355452 RANGAP1P46060 587 aaPredicted RBP18.01■□□□□ 0.47
LAMC3-201ENST00000355452 RTL5Q5HYW3 569 aaPredicted RBP18■□□□□ 0.47
LAMC3-201ENST00000355452 DDX10Q13206 875 aaKnown RBP17.92■□□□□ 0.46
LAMC3-201ENST00000355452 FANCIQ9NVI1 1328 aa17.9■□□□□ 0.46
LAMC3-201ENST00000355452 IL27Q8NEV9 243 aa17.87■□□□□ 0.45
LAMC3-201ENST00000355452 CEP162Q5TB80 1403 aa17.83■□□□□ 0.44
LAMC3-201ENST00000355452 ERICH6BQ5W0A0 696 aa17.81■□□□□ 0.44
LAMC3-201ENST00000355452 NOP58Q9Y2X3 529 aaKnown RBP17.81■□□□□ 0.44
LAMC3-201ENST00000355452 RSF1Q96T23 1441 aaPredicted RBP17.75■□□□□ 0.43
LAMC3-201ENST00000355452 HIRIP3Q9BW71 556 aaPredicted RBP17.75■□□□□ 0.43
LAMC3-201ENST00000355452 UBE2Q2Q8WVN8 375 aa17.75■□□□□ 0.43
LAMC3-201ENST00000355452 ANP32CO43423 234 aa17.73■□□□□ 0.43
LAMC3-201ENST00000355452 PAK3O75914 559 aaPredicted RBP17.71■□□□□ 0.43
LAMC3-201ENST00000355452 HNRNPUQ00839 825 aaKnown RBP eCLIP17.7■□□□□ 0.42
LAMC3-201ENST00000355452 RB1CC1Q8TDY2 1594 aa17.69■□□□□ 0.42
LAMC3-201ENST00000355452 WRNQ14191 1432 aaPredicted RBP eCLIP17.68■□□□□ 0.42
LAMC3-201ENST00000355452 B4GALNT3Q6L9W6 998 aa17.67■□□□□ 0.42
LAMC3-201ENST00000355452 ANP32AP39687 249 aaKnown RBP17.66■□□□□ 0.42
LAMC3-201ENST00000355452 ZBTB47Q9UFB7 747 aaPredicted RBP17.66■□□□□ 0.42
LAMC3-201ENST00000355452 NPM2Q86SE8 214 aaKnown RBP17.62■□□□□ 0.41
LAMC3-201ENST00000355452 LAS1LQ9Y4W2 734 aaKnown RBP17.57■□□□□ 0.4
LAMC3-201ENST00000355452 PPP4R2Q9NY27 417 aa17.56■□□□□ 0.4
LAMC3-201ENST00000355452 TNIKQ9UKE5 1360 aa17.55■□□□□ 0.4
LAMC3-201ENST00000355452 PKNOX2Q96KN3 472 aa17.55■□□□□ 0.4
LAMC3-201ENST00000355452 DHX57Q6P158 1386 aaKnown RBP17.54■□□□□ 0.4
LAMC3-201ENST00000355452 TIMELESSQ9UNS1 1208 aa17.53■□□□□ 0.4
LAMC3-201ENST00000355452 NEFMP07197 916 aa17.51■□□□□ 0.39
LAMC3-201ENST00000355452 IPO9Q96P70 1041 aaKnown RBP17.45■□□□□ 0.38
LAMC3-201ENST00000355452 BRPF3Q9ULD4 1205 aa17.45■□□□□ 0.38
LAMC3-201ENST00000355452 ABCC9O60706 1549 aa17.44■□□□□ 0.38
LAMC3-201ENST00000355452 CCER2I3L3R5 266 aa17.44■□□□□ 0.38
LAMC3-201ENST00000355452 SOGA1O94964 1423 aa17.44■□□□□ 0.38
LAMC3-201ENST00000355452 CNGB1Q14028 1251 aaPredicted RBP17.41■□□□□ 0.38
LAMC3-201ENST00000355452 SIN3AQ96ST3 1273 aa17.4■□□□□ 0.38
LAMC3-201ENST00000355452 FAM9BQ8IZU0 186 aa17.38■□□□□ 0.37
LAMC3-201ENST00000355452 GLIPR1L2Q4G1C9 344 aa17.37■□□□□ 0.37
LAMC3-201ENST00000355452 CCDC88BA6NC98 1476 aa17.35■□□□□ 0.37
LAMC3-201ENST00000355452 CLIP1P30622 1438 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms