RNA–Protein interactions for RNA: ENST00000319685.12

TMTC1-202, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 2

Gene TMTC1, Length 3,254 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-202ENST00000319685 NISCHQ9Y2I1 1504 aa16.42■□□□□ 0.22
TMTC1-202ENST00000319685 PPARGC1BQ86YN6 1023 aaKnown RBP15.72■□□□□ 0.11
TMTC1-202ENST00000319685 HRCP23327 699 aa15.6■□□□□ 0.09
TMTC1-202ENST00000319685 PCGF6Q9BYE7 350 aa15.49■□□□□ 0.07
TMTC1-202ENST00000319685 PELP1Q8IZL8 1130 aaKnown RBP15.37■□□□□ 0.05
TMTC1-202ENST00000319685 SUPT5HO00267 1087 aaKnown RBP15.19■□□□□ 0.02
TMTC1-202ENST00000319685 SCAF1Q9H7N4 1312 aaKnown RBP15.14■□□□□ 0.01
TMTC1-202ENST00000319685 SHROOM4Q9ULL8 1493 aa15.07■□□□□ 0
TMTC1-202ENST00000319685 MYT1Q01538 1121 aa14.76□□□□□ -0.05
TMTC1-202ENST00000319685 MYO15BQ96JP2 1530 aa14.74□□□□□ -0.05
TMTC1-202ENST00000319685 LOC105371045A0A1W2PR82 267 aa14.69□□□□□ -0.06
TMTC1-202ENST00000319685 GTF3C3Q9Y5Q9 886 aa14.66□□□□□ -0.06
TMTC1-202ENST00000319685 NEUROD1Q13562 356 aa14.64□□□□□ -0.07
TMTC1-202ENST00000319685 CHIC1Q5VXU3 224 aa14.63□□□□□ -0.07
TMTC1-202ENST00000319685 DCAF8L2P0C7V8 631 aa14.54□□□□□ -0.08
TMTC1-202ENST00000319685 ACIN1Q9UKV3 1341 aaKnown RBP14.54□□□□□ -0.08
TMTC1-202ENST00000319685 EHMT2Q96KQ7 1210 aa14.51□□□□□ -0.09
TMTC1-202ENST00000319685 TRIM26Q12899 539 aaPredicted RBP14.5□□□□□ -0.09
TMTC1-202ENST00000319685 YTHDC1Q96MU7 727 aaKnown RBP14.45□□□□□ -0.1
TMTC1-202ENST00000319685 ZEB1P37275 1124 aaPredicted RBP14.34□□□□□ -0.11
TMTC1-202ENST00000319685 CENPBP07199 599 aaPredicted RBP14.34□□□□□ -0.11
TMTC1-202ENST00000319685 BCL11AQ9H165 835 aa14.26□□□□□ -0.13
TMTC1-202ENST00000319685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.24□□□□□ -0.13
TMTC1-202ENST00000319685 DIEXFQ68CQ4 756 aaKnown RBP14.21□□□□□ -0.13
TMTC1-202ENST00000319685 FAM9AQ8IZU1 332 aaPredicted RBP14.21□□□□□ -0.14
TMTC1-202ENST00000319685 TTBK1Q5TCY1 1321 aaPredicted RBP14.17□□□□□ -0.14
TMTC1-202ENST00000319685 CCER1Q8TC90 406 aaPredicted RBP14.16□□□□□ -0.14
TMTC1-202ENST00000319685 DCAF1Q9Y4B6 1507 aa14.15□□□□□ -0.14
TMTC1-202ENST00000319685 CCDC180Q9P1Z9 1646 aa13.97□□□□□ -0.17
TMTC1-202ENST00000319685 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
TMTC1-202ENST00000319685 PRKCSHP14314 528 aaPredicted RBP13.93□□□□□ -0.18
TMTC1-202ENST00000319685 ANP32EQ9BTT0 268 aa13.89□□□□□ -0.19
TMTC1-202ENST00000319685 MIER1Q8N108 512 aa13.85□□□□□ -0.19
TMTC1-202ENST00000319685 BCANQ96GW7 911 aa13.82□□□□□ -0.2
TMTC1-202ENST00000319685 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.2
TMTC1-202ENST00000319685 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
TMTC1-202ENST00000319685 TSHZ2Q9NRE2 1034 aa13.74□□□□□ -0.21
TMTC1-202ENST00000319685 ZNF316A6NFI3 1004 aaPredicted RBP13.71□□□□□ -0.22
TMTC1-202ENST00000319685 SUPT16HQ9Y5B9 1047 aaKnown RBP13.7□□□□□ -0.22
TMTC1-202ENST00000319685 ABCC9O60706 1549 aa13.65□□□□□ -0.22
TMTC1-202ENST00000319685 ITGAEP38570 1179 aa13.53□□□□□ -0.24
TMTC1-202ENST00000319685 HNRNPUL2Q1KMD3 747 aaKnown RBP13.5□□□□□ -0.25
TMTC1-202ENST00000319685 ANO8Q9HCE9 1232 aaPredicted RBP13.5□□□□□ -0.25
TMTC1-202ENST00000319685 ERICH6Q7L0X2 663 aa13.45□□□□□ -0.26
TMTC1-202ENST00000319685 FKBP8Q14318 412 aa13.44□□□□□ -0.26
TMTC1-202ENST00000319685 CCDC136Q96JN2 1154 aa13.44□□□□□ -0.26
TMTC1-202ENST00000319685 RBM19Q9Y4C8 960 aaKnown RBP13.42□□□□□ -0.26
TMTC1-202ENST00000319685 KCNH8Q96L42 1107 aa13.38□□□□□ -0.27
TMTC1-202ENST00000319685 SCRIBQ14160 1630 aa13.37□□□□□ -0.27
TMTC1-202ENST00000319685 MSH5O43196 834 aa13.33□□□□□ -0.28
TMTC1-202ENST00000319685 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
TMTC1-202ENST00000319685 NBR1Q14596 966 aa13.29□□□□□ -0.28
TMTC1-202ENST00000319685 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.29□□□□□ -0.28
TMTC1-202ENST00000319685 SALL2Q9Y467 1007 aaPredicted RBP13.29□□□□□ -0.28
TMTC1-202ENST00000319685 DEKP35659 375 aaKnown RBP13.26□□□□□ -0.29
TMTC1-202ENST00000319685 RANGAP1P46060 587 aaPredicted RBP13.25□□□□□ -0.29
TMTC1-202ENST00000319685 NEFLP07196 543 aa13.24□□□□□ -0.29
TMTC1-202ENST00000319685 IRX6P78412 446 aaPredicted RBP13.24□□□□□ -0.29
TMTC1-202ENST00000319685 TRIM52Q96A61 297 aa13.22□□□□□ -0.29
TMTC1-202ENST00000319685 PABPN1Q86U42 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
TMTC1-202ENST00000319685 CLSPNQ9HAW4 1339 aa13.15□□□□□ -0.3
TMTC1-202ENST00000319685 UBTFP17480 764 aaKnown RBP13.15□□□□□ -0.3
TMTC1-202ENST00000319685 EIF5BO60841 1220 aaKnown RBP13.09□□□□□ -0.31
TMTC1-202ENST00000319685 IL27Q8NEV9 243 aa13.08□□□□□ -0.31
TMTC1-202ENST00000319685 HIRIP3Q9BW71 556 aaPredicted RBP13.07□□□□□ -0.32
TMTC1-202ENST00000319685 APLP2Q06481 763 aa13.07□□□□□ -0.32
TMTC1-202ENST00000319685 DDX10Q13206 875 aaKnown RBP13.05□□□□□ -0.32
TMTC1-202ENST00000319685 CDK11AQ9UQ88 783 aaPredicted RBP13.04□□□□□ -0.32
TMTC1-202ENST00000319685 CECR2Q9BXF3 1484 aa13.03□□□□□ -0.32
TMTC1-202ENST00000319685 RSF1Q96T23 1441 aaPredicted RBP13.01□□□□□ -0.33
TMTC1-202ENST00000319685 NACADO15069 1562 aa12.97□□□□□ -0.33
TMTC1-202ENST00000319685 PAK3O75914 559 aaPredicted RBP12.95□□□□□ -0.34
TMTC1-202ENST00000319685 RTL5Q5HYW3 569 aaPredicted RBP12.93□□□□□ -0.34
TMTC1-202ENST00000319685 CEP162Q5TB80 1403 aa12.91□□□□□ -0.34
TMTC1-202ENST00000319685 RB1CC1Q8TDY2 1594 aa12.9□□□□□ -0.34
TMTC1-202ENST00000319685 FANCIQ9NVI1 1328 aa12.89□□□□□ -0.35
TMTC1-202ENST00000319685 B4GALNT3Q6L9W6 998 aa12.88□□□□□ -0.35
TMTC1-202ENST00000319685 MROH2BQ7Z745 1585 aa12.87□□□□□ -0.35
TMTC1-202ENST00000319685 NOP58Q9Y2X3 529 aaKnown RBP12.86□□□□□ -0.35
TMTC1-202ENST00000319685 SENP3-EIF4A1A0A087X0R7 540 aa12.85□□□□□ -0.35
TMTC1-202ENST00000319685 HNRNPUQ00839 825 aaKnown RBP eCLIP12.85□□□□□ -0.35
TMTC1-202ENST00000319685 TIMELESSQ9UNS1 1208 aa12.84□□□□□ -0.35
TMTC1-202ENST00000319685 CNGB1Q14028 1251 aaPredicted RBP12.83□□□□□ -0.36
TMTC1-202ENST00000319685 NPM2Q86SE8 214 aaKnown RBP12.83□□□□□ -0.36
TMTC1-202ENST00000319685 UBE2Q2Q8WVN8 375 aa12.82□□□□□ -0.36
TMTC1-202ENST00000319685 LAS1LQ9Y4W2 734 aaKnown RBP12.81□□□□□ -0.36
TMTC1-202ENST00000319685 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
TMTC1-202ENST00000319685 WIZO95785 1651 aa12.78□□□□□ -0.36
TMTC1-202ENST00000319685 ANP32CO43423 234 aa12.77□□□□□ -0.36
TMTC1-202ENST00000319685 SIN3AQ96ST3 1273 aa12.76□□□□□ -0.37
TMTC1-202ENST00000319685 BAZ1BQ9UIG0 1483 aaKnown RBP12.74□□□□□ -0.37
TMTC1-202ENST00000319685 BRPF3Q9ULD4 1205 aa12.73□□□□□ -0.37
TMTC1-202ENST00000319685 ERICH6BQ5W0A0 696 aa12.72□□□□□ -0.37
TMTC1-202ENST00000319685 ZBTB47Q9UFB7 747 aaPredicted RBP12.72□□□□□ -0.37
TMTC1-202ENST00000319685 DHX57Q6P158 1386 aaKnown RBP12.71□□□□□ -0.37
TMTC1-202ENST00000319685 SOGA1O94964 1423 aa12.71□□□□□ -0.37
TMTC1-202ENST00000319685 PKNOX2Q96KN3 472 aa12.7□□□□□ -0.38
TMTC1-202ENST00000319685 WRNQ14191 1432 aaPredicted RBP eCLIP12.7□□□□□ -0.38
TMTC1-202ENST00000319685 ANP32AP39687 249 aaKnown RBP12.7□□□□□ -0.38
TMTC1-202ENST00000319685 NEFMP07197 916 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms