RNA–Protein interactions for RNA: ENST00000291892.10

RDH13-201, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 3,022 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-201ENST00000291892 NISCHQ9Y2I1 1504 aa24.84■■□□□ 1.57
RDH13-201ENST00000291892 HRCP23327 699 aa23.1■■□□□ 1.29
RDH13-201ENST00000291892 PPARGC1BQ86YN6 1023 aaKnown RBP22.98■■□□□ 1.27
RDH13-201ENST00000291892 PCGF6Q9BYE7 350 aa22.78■■□□□ 1.24
RDH13-201ENST00000291892 SUPT5HO00267 1087 aaKnown RBP22.58■■□□□ 1.21
RDH13-201ENST00000291892 PELP1Q8IZL8 1130 aaKnown RBP22.55■■□□□ 1.2
RDH13-201ENST00000291892 SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
RDH13-201ENST00000291892 MYO15BQ96JP2 1530 aa22.2■■□□□ 1.15
RDH13-201ENST00000291892 SCAF1Q9H7N4 1312 aaKnown RBP22.17■■□□□ 1.14
RDH13-201ENST00000291892 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
RDH13-201ENST00000291892 LOC105371045A0A1W2PR82 267 aa21.79■■□□□ 1.08
RDH13-201ENST00000291892 MYT1Q01538 1121 aa21.66■■□□□ 1.06
RDH13-201ENST00000291892 TRIM26Q12899 539 aaPredicted RBP21.65■■□□□ 1.06
RDH13-201ENST00000291892 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
RDH13-201ENST00000291892 DCAF8L2P0C7V8 631 aa21.49■■□□□ 1.03
RDH13-201ENST00000291892 NEUROD1Q13562 356 aa21.49■■□□□ 1.03
RDH13-201ENST00000291892 GTF3C3Q9Y5Q9 886 aa21.45■■□□□ 1.02
RDH13-201ENST00000291892 ZEB1P37275 1124 aaPredicted RBP21.44■■□□□ 1.02
RDH13-201ENST00000291892 ACIN1Q9UKV3 1341 aaKnown RBP21.44■■□□□ 1.02
RDH13-201ENST00000291892 CCDC180Q9P1Z9 1646 aa21.28■■□□□ 1
RDH13-201ENST00000291892 EHMT2Q96KQ7 1210 aa21.21■□□□□ 0.99
RDH13-201ENST00000291892 CENPBP07199 599 aaPredicted RBP21.13■□□□□ 0.97
RDH13-201ENST00000291892 YTHDC1Q96MU7 727 aaKnown RBP21.03■□□□□ 0.96
RDH13-201ENST00000291892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.01■□□□□ 0.95
RDH13-201ENST00000291892 FAM9AQ8IZU1 332 aaPredicted RBP21■□□□□ 0.95
RDH13-201ENST00000291892 DIEXFQ68CQ4 756 aaKnown RBP20.99■□□□□ 0.95
RDH13-201ENST00000291892 ZCCHC6Q5VYS8 1495 aaKnown RBP20.93■□□□□ 0.94
RDH13-201ENST00000291892 CCER1Q8TC90 406 aaPredicted RBP20.92■□□□□ 0.94
RDH13-201ENST00000291892 TTBK1Q5TCY1 1321 aaPredicted RBP20.72■□□□□ 0.91
RDH13-201ENST00000291892 BCL11AQ9H165 835 aa20.65■□□□□ 0.9
RDH13-201ENST00000291892 TRIM41Q8WV44 630 aa20.63■□□□□ 0.89
RDH13-201ENST00000291892 MIER1Q8N108 512 aa20.46■□□□□ 0.87
RDH13-201ENST00000291892 ZNF316A6NFI3 1004 aaPredicted RBP20.4■□□□□ 0.86
RDH13-201ENST00000291892 ABCC9O60706 1549 aa20.39■□□□□ 0.86
RDH13-201ENST00000291892 ANP32EQ9BTT0 268 aa20.36■□□□□ 0.85
RDH13-201ENST00000291892 CSRNP3Q8WYN3 585 aa20.31■□□□□ 0.84
RDH13-201ENST00000291892 TSHZ2Q9NRE2 1034 aa20.21■□□□□ 0.83
RDH13-201ENST00000291892 SUPT16HQ9Y5B9 1047 aaKnown RBP20.21■□□□□ 0.83
RDH13-201ENST00000291892 SCRIBQ14160 1630 aa20.12■□□□□ 0.81
RDH13-201ENST00000291892 BCANQ96GW7 911 aa20.11■□□□□ 0.81
RDH13-201ENST00000291892 PRKCSHP14314 528 aaPredicted RBP20■□□□□ 0.79
RDH13-201ENST00000291892 HNRNPUL2Q1KMD3 747 aaKnown RBP19.99■□□□□ 0.79
RDH13-201ENST00000291892 RSF1Q96T23 1441 aaPredicted RBP19.89■□□□□ 0.77
RDH13-201ENST00000291892 RB1CC1Q8TDY2 1594 aa19.86■□□□□ 0.77
RDH13-201ENST00000291892 FKBP8Q14318 412 aa19.75■□□□□ 0.75
RDH13-201ENST00000291892 CLSPNQ9HAW4 1339 aa19.75■□□□□ 0.75
RDH13-201ENST00000291892 ITGAEP38570 1179 aa19.74■□□□□ 0.75
RDH13-201ENST00000291892 RBM19Q9Y4C8 960 aaKnown RBP19.73■□□□□ 0.75
RDH13-201ENST00000291892 KCNH8Q96L42 1107 aa19.72■□□□□ 0.75
RDH13-201ENST00000291892 CECR2Q9BXF3 1484 aa19.68■□□□□ 0.74
RDH13-201ENST00000291892 UBTFP17480 764 aaKnown RBP19.65■□□□□ 0.74
RDH13-201ENST00000291892 PABPN1Q86U42 306 aaKnown RBP eCLIP19.64■□□□□ 0.73
RDH13-201ENST00000291892 CEP162Q5TB80 1403 aa19.62■□□□□ 0.73
RDH13-201ENST00000291892 ERICH6Q7L0X2 663 aa19.6■□□□□ 0.73
RDH13-201ENST00000291892 MSH5O43196 834 aa19.59■□□□□ 0.73
RDH13-201ENST00000291892 NACADO15069 1562 aa19.57■□□□□ 0.72
RDH13-201ENST00000291892 RANGAP1P46060 587 aaPredicted RBP19.52■□□□□ 0.72
RDH13-201ENST00000291892 NEFLP07196 543 aa19.51■□□□□ 0.71
RDH13-201ENST00000291892 WRNQ14191 1432 aaPredicted RBP eCLIP19.51■□□□□ 0.71
RDH13-201ENST00000291892 ANO8Q9HCE9 1232 aaPredicted RBP19.46■□□□□ 0.71
RDH13-201ENST00000291892 MROH2BQ7Z745 1585 aa19.46■□□□□ 0.71
RDH13-201ENST00000291892 TRIM52Q96A61 297 aa19.43■□□□□ 0.7
RDH13-201ENST00000291892 DEKP35659 375 aaKnown RBP19.38■□□□□ 0.69
RDH13-201ENST00000291892 IRX6P78412 446 aaPredicted RBP19.36■□□□□ 0.69
RDH13-201ENST00000291892 APLP2Q06481 763 aa19.35■□□□□ 0.69
RDH13-201ENST00000291892 WIZO95785 1651 aa19.34■□□□□ 0.69
RDH13-201ENST00000291892 SOGA1O94964 1423 aa19.34■□□□□ 0.69
RDH13-201ENST00000291892 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
RDH13-201ENST00000291892 ABCC8Q09428 1581 aa19.31■□□□□ 0.68
RDH13-201ENST00000291892 TNIKQ9UKE5 1360 aa19.31■□□□□ 0.68
RDH13-201ENST00000291892 DDX10Q13206 875 aaKnown RBP19.3■□□□□ 0.68
RDH13-201ENST00000291892 NBR1Q14596 966 aa19.3■□□□□ 0.68
RDH13-201ENST00000291892 CCDC136Q96JN2 1154 aa19.29■□□□□ 0.68
RDH13-201ENST00000291892 SALL2Q9Y467 1007 aaPredicted RBP19.24■□□□□ 0.67
RDH13-201ENST00000291892 HIRIP3Q9BW71 556 aaPredicted RBP19.22■□□□□ 0.67
RDH13-201ENST00000291892 RUSC2Q8N2Y8 1516 aa19.22■□□□□ 0.67
RDH13-201ENST00000291892 DHX57Q6P158 1386 aaKnown RBP19.21■□□□□ 0.67
RDH13-201ENST00000291892 CDK11AQ9UQ88 783 aaPredicted RBP19.21■□□□□ 0.67
RDH13-201ENST00000291892 RTN4Q9NQC3 1192 aaKnown RBP19.19■□□□□ 0.66
RDH13-201ENST00000291892 FANCIQ9NVI1 1328 aa19.16■□□□□ 0.66
RDH13-201ENST00000291892 UNC13AQ9UPW8 1703 aa19.15■□□□□ 0.66
RDH13-201ENST00000291892 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.12■□□□□ 0.65
RDH13-201ENST00000291892 CLIP1P30622 1438 aa19.04■□□□□ 0.64
RDH13-201ENST00000291892 BAZ1AQ9NRL2 1556 aaPredicted RBP19.04■□□□□ 0.64
RDH13-201ENST00000291892 GOLGA3Q08378 1498 aa19.04■□□□□ 0.64
RDH13-201ENST00000291892 IL27Q8NEV9 243 aa19.03■□□□□ 0.64
RDH13-201ENST00000291892 PAK3O75914 559 aaPredicted RBP19■□□□□ 0.63
RDH13-201ENST00000291892 MYT1LQ9UL68 1186 aa19■□□□□ 0.63
RDH13-201ENST00000291892 ANP32CO43423 234 aa18.99■□□□□ 0.63
RDH13-201ENST00000291892 BICRAQ9NZM4 1560 aa18.99■□□□□ 0.63
RDH13-201ENST00000291892 HNRNPUQ00839 825 aaKnown RBP eCLIP18.98■□□□□ 0.63
RDH13-201ENST00000291892 SMARCA4P51532 1647 aa18.97■□□□□ 0.63
RDH13-201ENST00000291892 B4GALNT3Q6L9W6 998 aa18.95■□□□□ 0.62
RDH13-201ENST00000291892 NOP58Q9Y2X3 529 aaKnown RBP18.95■□□□□ 0.62
RDH13-201ENST00000291892 VPS8Q8N3P4 1428 aa18.94■□□□□ 0.62
RDH13-201ENST00000291892 EIF4G1Q04637 1599 aaKnown RBP18.94■□□□□ 0.62
RDH13-201ENST00000291892 SIN3AQ96ST3 1273 aa18.93■□□□□ 0.62
RDH13-201ENST00000291892 KANK4Q5T7N3 995 aaPredicted RBP18.92■□□□□ 0.62
RDH13-201ENST00000291892 RTL5Q5HYW3 569 aaPredicted RBP18.92■□□□□ 0.62
RDH13-201ENST00000291892 PPP1R15AO75807 674 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms