RNA–Protein interactions for RNA: ENSMUST00000223012.1

CT009546.2-201, mousemouse

TSL 1 (best) BASIC

Gene CT009546.2, Length 3,476 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT009546.2-201ENSMUST00000223012 Gm35339A0A140LHH9 1649 aa18.15■□□□□ 0.5
CT009546.2-201ENSMUST00000223012 Rhox8Q6VSS7 320 aa17.3■□□□□ 0.36
CT009546.2-201ENSMUST00000223012 NischQ80TM9 1593 aa17.27■□□□□ 0.35
CT009546.2-201ENSMUST00000223012 Abcc9P70170 1546 aa17.09■□□□□ 0.33
CT009546.2-201ENSMUST00000223012 Abcc8B2RUS7 1588 aa16.74■□□□□ 0.27
CT009546.2-201ENSMUST00000223012 Ccdc136Q3TVA9 1136 aa16.01■□□□□ 0.15
CT009546.2-201ENSMUST00000223012 Dcaf1Q80TR8 1506 aa15.99■□□□□ 0.15
CT009546.2-201ENSMUST00000223012 Ccdc180J3QNE4 1664 aa15.96■□□□□ 0.15
CT009546.2-201ENSMUST00000223012 ScribQ80U72 1612 aa15.91■□□□□ 0.14
CT009546.2-201ENSMUST00000223012 Ehmt2Q9Z148 1263 aaKnown RBP15.9■□□□□ 0.14
CT009546.2-201ENSMUST00000223012 Rtl1Q7M732 1744 aa15.53■□□□□ 0.08
CT009546.2-201ENSMUST00000223012 Gab3Q8BSM5 595 aa15.31■□□□□ 0.04
CT009546.2-201ENSMUST00000223012 Cngb1E1AZ71 1325 aa15.29■□□□□ 0.04
CT009546.2-201ENSMUST00000223012 Kdm5dQ62240 1548 aa15.28■□□□□ 0.04
CT009546.2-201ENSMUST00000223012 Crybg2B7ZCC2 1516 aa15.28■□□□□ 0.04
CT009546.2-201ENSMUST00000223012 NacadQ5SWP3 1504 aa15.24■□□□□ 0.03
CT009546.2-201ENSMUST00000223012 Esf1Q3V1V3 845 aaKnown RBP15.16■□□□□ 0.02
CT009546.2-201ENSMUST00000223012 Rb1cc1Q9ESK9 1588 aa15.09■□□□□ 0.01
CT009546.2-201ENSMUST00000223012 Trim41Q5NCC3 630 aa15.08■□□□□ 0.01
CT009546.2-201ENSMUST00000223012 Baz1aO88379 1555 aa15.08■□□□□ 0
CT009546.2-201ENSMUST00000223012 Sycp2Q9CUU3 1500 aa14.99□□□□□ -0.01
CT009546.2-201ENSMUST00000223012 Zcchc6Q5BLK4 1491 aaKnown RBP14.96□□□□□ -0.02
CT009546.2-201ENSMUST00000223012 Smarca2Q6DIC0 1577 aa14.83□□□□□ -0.03
CT009546.2-201ENSMUST00000223012 Myt1lP97500 1187 aa14.82□□□□□ -0.04
CT009546.2-201ENSMUST00000223012 BicraF8VPZ9 1578 aa14.77□□□□□ -0.04
CT009546.2-201ENSMUST00000223012 Il27Q8K3I6 234 aa14.74□□□□□ -0.05
CT009546.2-201ENSMUST00000223012 Npm2Q80W85 207 aa14.57□□□□□ -0.08
CT009546.2-201ENSMUST00000223012 Chic1Q8CBW7 227 aa14.57□□□□□ -0.08
CT009546.2-201ENSMUST00000223012 Zeb1Q64318 1117 aa14.54□□□□□ -0.08
CT009546.2-201ENSMUST00000223012 UbtfP25976 765 aaKnown RBP14.47□□□□□ -0.09
CT009546.2-201ENSMUST00000223012 Ppargc1bQ8VHJ7 1014 aa14.46□□□□□ -0.1
CT009546.2-201ENSMUST00000223012 Ap3b1Q9Z1T1 1105 aa14.44□□□□□ -0.1
CT009546.2-201ENSMUST00000223012 Baz1bQ9Z277 1479 aa14.39□□□□□ -0.11
CT009546.2-201ENSMUST00000223012 Thoc2B1AZI6 1594 aaKnown RBP14.38□□□□□ -0.11
CT009546.2-201ENSMUST00000223012 HrcG5E8J6 738 aa14.29□□□□□ -0.12
CT009546.2-201ENSMUST00000223012 Cttnbp2B9EJA2 1648 aa14.21□□□□□ -0.13
CT009546.2-201ENSMUST00000223012 Smarca4Q3TKT4 1613 aaKnown RBP14.21□□□□□ -0.13
CT009546.2-201ENSMUST00000223012 Wdr66E9Q743 1299 aa14.17□□□□□ -0.14
CT009546.2-201ENSMUST00000223012 Top2bQ64511 1612 aa14.16□□□□□ -0.14
CT009546.2-201ENSMUST00000223012 Plekhg3Q4VAC9 1341 aa14.14□□□□□ -0.15
CT009546.2-201ENSMUST00000223012 Acin1Q9JIX8 1338 aaKnown RBP14.13□□□□□ -0.15
CT009546.2-201ENSMUST00000223012 Ube2uB1AUC4 352 aa14.12□□□□□ -0.15
CT009546.2-201ENSMUST00000223012 Cecr2E9Q2Z1 1453 aa14.07□□□□□ -0.16
CT009546.2-201ENSMUST00000223012 Lmod2Q3UHZ5 550 aa14.06□□□□□ -0.16
CT009546.2-201ENSMUST00000223012 Synj1Q8CHC4 1574 aa14.05□□□□□ -0.16
CT009546.2-201ENSMUST00000223012 Unc13aQ4KUS2 1712 aa14□□□□□ -0.17
CT009546.2-201ENSMUST00000223012 Mier1Q5UAK0 511 aa13.99□□□□□ -0.17
CT009546.2-201ENSMUST00000223012 CftrP26361 1476 aa13.99□□□□□ -0.17
CT009546.2-201ENSMUST00000223012 Iqgap2Q3UQ44 1575 aa13.98□□□□□ -0.17
CT009546.2-201ENSMUST00000223012 TnnQ80Z71 1560 aa13.97□□□□□ -0.17
CT009546.2-201ENSMUST00000223012 Rsf1E9PWW9 1441 aaKnown RBP13.96□□□□□ -0.17
CT009546.2-201ENSMUST00000223012 Atad2bE9Q166 1460 aaKnown RBP13.96□□□□□ -0.17
CT009546.2-201ENSMUST00000223012 Brd4Q9ESU6 1400 aaKnown RBP13.96□□□□□ -0.17
CT009546.2-201ENSMUST00000223012 Eid3Q3V124 375 aa13.92□□□□□ -0.18
CT009546.2-201ENSMUST00000223012 Ccdc88bQ4QRL3 1481 aa13.92□□□□□ -0.18
CT009546.2-201ENSMUST00000223012 Supt5hO55201 1082 aaKnown RBP13.92□□□□□ -0.18
CT009546.2-201ENSMUST00000223012 Fam50aQ9WV03 339 aaKnown RBP13.92□□□□□ -0.18
CT009546.2-201ENSMUST00000223012 Ubl4bQ9CQ84 188 aa13.9□□□□□ -0.18
CT009546.2-201ENSMUST00000223012 Mapk8ip2Q9ERE9 830 aa13.89□□□□□ -0.19
CT009546.2-201ENSMUST00000223012 Wdr62Q3U3T8 1523 aa13.89□□□□□ -0.19
CT009546.2-201ENSMUST00000223012 Fam135aQ6NS59 1506 aa13.88□□□□□ -0.19
CT009546.2-201ENSMUST00000223012 Pds5bQ4VA53 1446 aaKnown RBP13.88□□□□□ -0.19
CT009546.2-201ENSMUST00000223012 Rpgrip1Q9EPQ2 1331 aa13.88□□□□□ -0.19
CT009546.2-201ENSMUST00000223012 Npm1Q61937 292 aaKnown RBP13.87□□□□□ -0.19
CT009546.2-201ENSMUST00000223012 Ifnlr1Q8CGK5 535 aa13.85□□□□□ -0.19
CT009546.2-201ENSMUST00000223012 Zbtb7cQ8VCZ7 619 aa13.85□□□□□ -0.19
CT009546.2-201ENSMUST00000223012 Pcgf6Q99NA9 353 aa13.83□□□□□ -0.2
CT009546.2-201ENSMUST00000223012 Fkbp15Q6P9Q6 1216 aaKnown RBP13.83□□□□□ -0.2
CT009546.2-201ENSMUST00000223012 Neurod1Q60867 357 aa13.78□□□□□ -0.2
CT009546.2-201ENSMUST00000223012 Cep164Q5DU05 1446 aa13.75□□□□□ -0.21
CT009546.2-201ENSMUST00000223012 Las1lA2BE28 776 aaKnown RBP13.75□□□□□ -0.21
CT009546.2-201ENSMUST00000223012 Golga3P55937 1487 aa13.72□□□□□ -0.21
CT009546.2-201ENSMUST00000223012 Lamc3Q9R0B6 1581 aa13.71□□□□□ -0.21
CT009546.2-201ENSMUST00000223012 Gpatch8A2A6A1 1505 aa13.7□□□□□ -0.22
CT009546.2-201ENSMUST00000223012 Frmpd1A2AKB4 1549 aa13.69□□□□□ -0.22
CT009546.2-201ENSMUST00000223012 Slc24a1Q91WD8 1130 aa13.69□□□□□ -0.22
CT009546.2-201ENSMUST00000223012 Eif4g1Q6NZJ6 1600 aaKnown RBP13.67□□□□□ -0.22
CT009546.2-201ENSMUST00000223012 Kif15Q6P9L6 1387 aa13.66□□□□□ -0.22
CT009546.2-201ENSMUST00000223012 Cc2d2aQ8CFW7 1633 aa13.66□□□□□ -0.22
CT009546.2-201ENSMUST00000223012 Dnajc5bQ9CQ94 199 aa13.63□□□□□ -0.23
CT009546.2-201ENSMUST00000223012 Zbtb4Q5F293 982 aa13.62□□□□□ -0.23
CT009546.2-201ENSMUST00000223012 Clip1Q922J3 1391 aa13.61□□□□□ -0.23
CT009546.2-201ENSMUST00000223012 Top2aQ01320 1528 aaKnown RBP13.6□□□□□ -0.23
CT009546.2-201ENSMUST00000223012 Chic2Q9D9G3 165 aa13.59□□□□□ -0.23
CT009546.2-201ENSMUST00000223012 Fmn1Q05860 1466 aa13.56□□□□□ -0.24
CT009546.2-201ENSMUST00000223012 Sall2Q9QX96 1004 aa13.55□□□□□ -0.24
CT009546.2-201ENSMUST00000223012 Aebp2Q9Z248 504 aaKnown RBP13.52□□□□□ -0.25
CT009546.2-201ENSMUST00000223012 NefmP08553 848 aa13.51□□□□□ -0.25
CT009546.2-201ENSMUST00000223012 Plppr3Q7TPB0 716 aa13.45□□□□□ -0.26
CT009546.2-201ENSMUST00000223012 NclP09405 707 aaKnown RBP13.45□□□□□ -0.26
CT009546.2-201ENSMUST00000223012 Gm38655A0A286YDK6 273 aa13.44□□□□□ -0.26
CT009546.2-201ENSMUST00000223012 Ercc6F8VPZ5 1481 aa13.43□□□□□ -0.26
CT009546.2-201ENSMUST00000223012 TonslQ6NZL6 1363 aa13.4□□□□□ -0.26
CT009546.2-201ENSMUST00000223012 Dnajc5P60904 198 aa13.4□□□□□ -0.26
CT009546.2-201ENSMUST00000223012 BlmO88700 1416 aa13.39□□□□□ -0.27
CT009546.2-201ENSMUST00000223012 Setd5Q5XJV7 1441 aa13.39□□□□□ -0.27
CT009546.2-201ENSMUST00000223012 Camsap1A2AHC3 1581 aa13.38□□□□□ -0.27
CT009546.2-201ENSMUST00000223012 Rapgef2Q8CHG7 1496 aa13.37□□□□□ -0.27
CT009546.2-201ENSMUST00000223012 Hnrnpul2Q00PI9 745 aaKnown RBP13.37□□□□□ -0.27
CT009546.2-201ENSMUST00000223012 Pelp1Q9DBD5 1123 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 61 ms