RNA–Protein interactions for RNA: ENSMUST00000214771.1

Hmg20a-203, Transcript of High mobility group protein 20A, mousemouse

TSL 1 (best) BASIC

Gene Hmg20a, Length 3,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20a-203ENSMUST00000214771 NischQ80TM9 1593 aa15.58■□□□□ 0.08
Hmg20a-203ENSMUST00000214771 Gm35339A0A140LHH9 1649 aa15.21■□□□□ 0.03
Hmg20a-203ENSMUST00000214771 Abcc9P70170 1546 aa15□□□□□ -0.01
Hmg20a-203ENSMUST00000214771 Abcc8B2RUS7 1588 aa14.87□□□□□ -0.03
Hmg20a-203ENSMUST00000214771 Rhox8Q6VSS7 320 aa14.46□□□□□ -0.1
Hmg20a-203ENSMUST00000214771 ScribQ80U72 1612 aa14.1□□□□□ -0.15
Hmg20a-203ENSMUST00000214771 Kdm5dQ62240 1548 aa13.77□□□□□ -0.21
Hmg20a-203ENSMUST00000214771 NacadQ5SWP3 1504 aa13.63□□□□□ -0.23
Hmg20a-203ENSMUST00000214771 Rb1cc1Q9ESK9 1588 aa13.62□□□□□ -0.23
Hmg20a-203ENSMUST00000214771 Dcaf1Q80TR8 1506 aa13.54□□□□□ -0.24
Hmg20a-203ENSMUST00000214771 Ccdc136Q3TVA9 1136 aa13.53□□□□□ -0.24
Hmg20a-203ENSMUST00000214771 Zcchc6Q5BLK4 1491 aaKnown RBP13.41□□□□□ -0.26
Hmg20a-203ENSMUST00000214771 Sycp2Q9CUU3 1500 aa13.37□□□□□ -0.27
Hmg20a-203ENSMUST00000214771 Baz1aO88379 1555 aa13.37□□□□□ -0.27
Hmg20a-203ENSMUST00000214771 Rpgrip1Q9EPQ2 1331 aa13.32□□□□□ -0.28
Hmg20a-203ENSMUST00000214771 BicraF8VPZ9 1578 aa13.19□□□□□ -0.3
Hmg20a-203ENSMUST00000214771 Rtl1Q7M732 1744 aa13.09□□□□□ -0.31
Hmg20a-203ENSMUST00000214771 Cecr2E9Q2Z1 1453 aa13.07□□□□□ -0.32
Hmg20a-203ENSMUST00000214771 Crybg2B7ZCC2 1516 aa13.03□□□□□ -0.32
Hmg20a-203ENSMUST00000214771 Smarca2Q6DIC0 1577 aa13.02□□□□□ -0.32
Hmg20a-203ENSMUST00000214771 Ccdc180J3QNE4 1664 aa13.02□□□□□ -0.32
Hmg20a-203ENSMUST00000214771 Trim41Q5NCC3 630 aa12.94□□□□□ -0.34
Hmg20a-203ENSMUST00000214771 Cngb1E1AZ71 1325 aa12.89□□□□□ -0.35
Hmg20a-203ENSMUST00000214771 Esf1Q3V1V3 845 aaKnown RBP12.88□□□□□ -0.35
Hmg20a-203ENSMUST00000214771 Acin1Q9JIX8 1338 aaKnown RBP12.86□□□□□ -0.35
Hmg20a-203ENSMUST00000214771 Synj1Q8CHC4 1574 aa12.76□□□□□ -0.37
Hmg20a-203ENSMUST00000214771 Brd4Q9ESU6 1400 aaKnown RBP12.75□□□□□ -0.37
Hmg20a-203ENSMUST00000214771 CftrP26361 1476 aa12.71□□□□□ -0.38
Hmg20a-203ENSMUST00000214771 Smarca4Q3TKT4 1613 aaKnown RBP12.69□□□□□ -0.38
Hmg20a-203ENSMUST00000214771 Chic1Q8CBW7 227 aa12.68□□□□□ -0.38
Hmg20a-203ENSMUST00000214771 Pcgf6Q99NA9 353 aa12.65□□□□□ -0.38
Hmg20a-203ENSMUST00000214771 Gab3Q8BSM5 595 aa12.64□□□□□ -0.39
Hmg20a-203ENSMUST00000214771 Pds5bQ4VA53 1446 aaKnown RBP12.62□□□□□ -0.39
Hmg20a-203ENSMUST00000214771 Atad2bE9Q166 1460 aaKnown RBP12.62□□□□□ -0.39
Hmg20a-203ENSMUST00000214771 Dnajc5bQ9CQ94 199 aa12.61□□□□□ -0.39
Hmg20a-203ENSMUST00000214771 Iqgap2Q3UQ44 1575 aa12.61□□□□□ -0.39
Hmg20a-203ENSMUST00000214771 Ehmt2Q9Z148 1263 aaKnown RBP12.56□□□□□ -0.4
Hmg20a-203ENSMUST00000214771 HrcG5E8J6 738 aa12.56□□□□□ -0.4
Hmg20a-203ENSMUST00000214771 Rsf1E9PWW9 1441 aaKnown RBP12.55□□□□□ -0.4
Hmg20a-203ENSMUST00000214771 Ccdc88bQ4QRL3 1481 aa12.53□□□□□ -0.4
Hmg20a-203ENSMUST00000214771 Golga3P55937 1487 aa12.52□□□□□ -0.4
Hmg20a-203ENSMUST00000214771 Cttnbp2B9EJA2 1648 aa12.52□□□□□ -0.4
Hmg20a-203ENSMUST00000214771 Il27Q8K3I6 234 aa12.49□□□□□ -0.41
Hmg20a-203ENSMUST00000214771 Frmpd1A2AKB4 1549 aa12.48□□□□□ -0.41
Hmg20a-203ENSMUST00000214771 Ercc6F8VPZ5 1481 aa12.42□□□□□ -0.42
Hmg20a-203ENSMUST00000214771 Ubl4bQ9CQ84 188 aa12.39□□□□□ -0.43
Hmg20a-203ENSMUST00000214771 Wdr62Q3U3T8 1523 aa12.38□□□□□ -0.43
Hmg20a-203ENSMUST00000214771 Cc2d2aQ8CFW7 1633 aa12.37□□□□□ -0.43
Hmg20a-203ENSMUST00000214771 Kif15Q6P9L6 1387 aa12.33□□□□□ -0.44
Hmg20a-203ENSMUST00000214771 Cep164Q5DU05 1446 aa12.33□□□□□ -0.44
Hmg20a-203ENSMUST00000214771 Top2bQ64511 1612 aa12.32□□□□□ -0.44
Hmg20a-203ENSMUST00000214771 Thoc2B1AZI6 1594 aaKnown RBP12.29□□□□□ -0.44
Hmg20a-203ENSMUST00000214771 Supt5hO55201 1082 aaKnown RBP12.28□□□□□ -0.44
Hmg20a-203ENSMUST00000214771 Myt1lP97500 1187 aa12.26□□□□□ -0.45
Hmg20a-203ENSMUST00000214771 Phldb1Q6PDH0 1371 aaKnown RBP12.25□□□□□ -0.45
Hmg20a-203ENSMUST00000214771 Npm2Q80W85 207 aa12.23□□□□□ -0.45
Hmg20a-203ENSMUST00000214771 Unc13aQ4KUS2 1712 aa12.22□□□□□ -0.45
Hmg20a-203ENSMUST00000214771 Neurod1Q60867 357 aa12.22□□□□□ -0.45
Hmg20a-203ENSMUST00000214771 Fmn1Q05860 1466 aa12.21□□□□□ -0.46
Hmg20a-203ENSMUST00000214771 Cux2P70298 1426 aa12.18□□□□□ -0.46
Hmg20a-203ENSMUST00000214771 Las1lA2BE28 776 aaKnown RBP12.18□□□□□ -0.46
Hmg20a-203ENSMUST00000214771 Npm1Q61937 292 aaKnown RBP12.18□□□□□ -0.46
Hmg20a-203ENSMUST00000214771 Zeb1Q64318 1117 aa12.13□□□□□ -0.47
Hmg20a-203ENSMUST00000214771 Lamc3Q9R0B6 1581 aa12.09□□□□□ -0.47
Hmg20a-203ENSMUST00000214771 PtprkP35822 1457 aa12.08□□□□□ -0.48
Hmg20a-203ENSMUST00000214771 Top2aQ01320 1528 aaKnown RBP12.08□□□□□ -0.48
Hmg20a-203ENSMUST00000214771 Fam135aQ6NS59 1506 aa12.08□□□□□ -0.48
Hmg20a-203ENSMUST00000214771 Rapgef2Q8CHG7 1496 aa12.07□□□□□ -0.48
Hmg20a-203ENSMUST00000214771 Baz1bQ9Z277 1479 aa12.03□□□□□ -0.48
Hmg20a-203ENSMUST00000214771 TnnQ80Z71 1560 aa12.03□□□□□ -0.48
Hmg20a-203ENSMUST00000214771 Ccdc18Q640L5 1455 aa12.02□□□□□ -0.49
Hmg20a-203ENSMUST00000214771 Ap3b1Q9Z1T1 1105 aa12.01□□□□□ -0.49
Hmg20a-203ENSMUST00000214771 Camsap1A2AHC3 1581 aa12.01□□□□□ -0.49
Hmg20a-203ENSMUST00000214771 Cep162Q6ZQ06 1403 aa11.97□□□□□ -0.49
Hmg20a-203ENSMUST00000214771 LrpprcQ6PB66 1392 aaKnown RBP11.96□□□□□ -0.49
Hmg20a-203ENSMUST00000214771 Mrc2Q64449 1479 aa11.95□□□□□ -0.5
Hmg20a-203ENSMUST00000214771 Dhx29Q6PGC1 1365 aaKnown RBP11.95□□□□□ -0.5
Hmg20a-203ENSMUST00000214771 Grin2bQ01097 1482 aa11.93□□□□□ -0.5
Hmg20a-203ENSMUST00000214771 1700123L14RikQ3V2K7 440 aa11.93□□□□□ -0.5
Hmg20a-203ENSMUST00000214771 Plekhg3Q4VAC9 1341 aa11.9□□□□□ -0.5
Hmg20a-203ENSMUST00000214771 Duox2A2AQ99 1517 aa11.89□□□□□ -0.51
Hmg20a-203ENSMUST00000214771 UbtfP25976 765 aaKnown RBP11.88□□□□□ -0.51
Hmg20a-203ENSMUST00000214771 Kif21aQ9QXL2 1672 aa11.87□□□□□ -0.51
Hmg20a-203ENSMUST00000214771 Rad54l2Q99NG0 1466 aa11.86□□□□□ -0.51
Hmg20a-203ENSMUST00000214771 PogzQ8BZH4 1409 aaKnown RBP11.86□□□□□ -0.51
Hmg20a-203ENSMUST00000214771 Arhgap35Q91YM2 1499 aa11.86□□□□□ -0.51
Hmg20a-203ENSMUST00000214771 Myt1Q8CFC2 1127 aa11.86□□□□□ -0.51
Hmg20a-203ENSMUST00000214771 Shroom4Q1W617 1475 aa11.86□□□□□ -0.51
Hmg20a-203ENSMUST00000214771 CenpbP27790 599 aa11.85□□□□□ -0.51
Hmg20a-203ENSMUST00000214771 Anks4bQ8K3X6 423 aa11.84□□□□□ -0.51
Hmg20a-203ENSMUST00000214771 Csrnp3P59055 597 aa11.83□□□□□ -0.52
Hmg20a-203ENSMUST00000214771 Plb1Q3TTY0 1478 aa11.83□□□□□ -0.52
Hmg20a-203ENSMUST00000214771 NrkQ9R0G8 1455 aa11.82□□□□□ -0.52
Hmg20a-203ENSMUST00000214771 Clip1Q922J3 1391 aa11.81□□□□□ -0.52
Hmg20a-203ENSMUST00000214771 NefmP08553 848 aa11.81□□□□□ -0.52
Hmg20a-203ENSMUST00000214771 Sall2Q9QX96 1004 aa11.8□□□□□ -0.52
Hmg20a-203ENSMUST00000214771 Samd9lQ69Z37 1561 aa11.78□□□□□ -0.52
Hmg20a-203ENSMUST00000214771 Lmod2Q3UHZ5 550 aa11.78□□□□□ -0.52
Hmg20a-203ENSMUST00000214771 Urb2E9Q7L1 1524 aaKnown RBP11.78□□□□□ -0.52
Hmg20a-203ENSMUST00000214771 Efcab5A0JP43 1406 aa11.77□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms