RNA–Protein interactions for RNA: ENSMUST00000208530.1

Clhc1-204, Transcript of Clathrin heavy chain linker domain-containing protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clhc1, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1-204ENSMUST00000208530 Mapk8ip2Q9ERE9 830 aa18.58■□□□□ 0.57
Clhc1-204ENSMUST00000208530 Chic1Q8CBW7 227 aa18.4■□□□□ 0.54
Clhc1-204ENSMUST00000208530 Phf23Q8BSN5 401 aa16.28■□□□□ 0.2
Clhc1-204ENSMUST00000208530 Gab3Q8BSM5 595 aa15.53■□□□□ 0.08
Clhc1-204ENSMUST00000208530 Plppr3Q7TPB0 716 aa15.29■□□□□ 0.04
Clhc1-204ENSMUST00000208530 Senp3Q9EP97 568 aaKnown RBP14.72□□□□□ -0.05
Clhc1-204ENSMUST00000208530 Fam163aQ8CAA5 168 aa14.12□□□□□ -0.15
Clhc1-204ENSMUST00000208530 Kcna4Q61423 654 aa13.29□□□□□ -0.28
Clhc1-204ENSMUST00000208530 Hoxd11P23813 323 aa13.26□□□□□ -0.29
Clhc1-204ENSMUST00000208530 Trap1aP19473 224 aa13.13□□□□□ -0.31
Clhc1-204ENSMUST00000208530 ArsiQ32KI9 573 aa13□□□□□ -0.33
Clhc1-204ENSMUST00000208530 Znf219Q6IQX8 726 aa12.96□□□□□ -0.33
Clhc1-204ENSMUST00000208530 Slc34a2Q9DBP0 697 aa12.6□□□□□ -0.39
Clhc1-204ENSMUST00000208530 Chrna2Q91X60 512 aa12.53□□□□□ -0.4
Clhc1-204ENSMUST00000208530 Dnajc5bQ9CQ94 199 aa12.49□□□□□ -0.41
Clhc1-204ENSMUST00000208530 Rsph4aQ8BYM7 716 aa12.49□□□□□ -0.41
Clhc1-204ENSMUST00000208530 GapdhsQ64467 440 aa12.39□□□□□ -0.43
Clhc1-204ENSMUST00000208530 Akt1s1Q9D1F4 257 aa12.28□□□□□ -0.44
Clhc1-204ENSMUST00000208530 Rimbp2Q80U40 1072 aa12.24□□□□□ -0.45
Clhc1-204ENSMUST00000208530 Dmrt2Q8BG36 561 aa11.87□□□□□ -0.51
Clhc1-204ENSMUST00000208530 Znf704Q9ERQ3 566 aa11.58□□□□□ -0.56
Clhc1-204ENSMUST00000208530 Slc4a5E9Q3M5 1116 aa11.56□□□□□ -0.56
Clhc1-204ENSMUST00000208530 Hs6st3Q9QYK4 470 aa11.54□□□□□ -0.56
Clhc1-204ENSMUST00000208530 Ppp4r2Q0VGB7 417 aa11.52□□□□□ -0.57
Clhc1-204ENSMUST00000208530 Sox12Q04890 314 aa11.48□□□□□ -0.57
Clhc1-204ENSMUST00000208530 Atf5O70191 283 aa11.42□□□□□ -0.58
Clhc1-204ENSMUST00000208530 Bach1P97302 739 aa11.27□□□□□ -0.61
Clhc1-204ENSMUST00000208530 Slc4a1apE9PX68 744 aa11.16□□□□□ -0.62
Clhc1-204ENSMUST00000208530 Grwd1Q810D6 446 aaKnown RBP11.06□□□□□ -0.64
Clhc1-204ENSMUST00000208530 Cacnb1Q8R3Z5 597 aa11.05□□□□□ -0.64
Clhc1-204ENSMUST00000208530 Egfem1Q8C088 590 aa11□□□□□ -0.65
Clhc1-204ENSMUST00000208530 Ppargc1bQ8VHJ7 1014 aa11□□□□□ -0.65
Clhc1-204ENSMUST00000208530 Ifnlr1Q8CGK5 535 aa10.97□□□□□ -0.65
Clhc1-204ENSMUST00000208530 WdpcpQ8C456 722 aa10.95□□□□□ -0.66
Clhc1-204ENSMUST00000208530 1700123L14RikQ3V2K7 440 aa10.89□□□□□ -0.67
Clhc1-204ENSMUST00000208530 Zbtb7aO88939 569 aaKnown RBP10.87□□□□□ -0.67
Clhc1-204ENSMUST00000208530 Znf703P0CL69 594 aa10.85□□□□□ -0.67
Clhc1-204ENSMUST00000208530 Rnf216P58283 853 aa10.79□□□□□ -0.68
Clhc1-204ENSMUST00000208530 Kcnn1Q9EQR3 537 aa10.77□□□□□ -0.69
Clhc1-204ENSMUST00000208530 Ildr2B5TVM2 661 aa10.76□□□□□ -0.69
Clhc1-204ENSMUST00000208530 G430095P16RikE9Q913 147 aa10.73□□□□□ -0.69
Clhc1-204ENSMUST00000208530 Prr29B1ARI9 187 aa10.72□□□□□ -0.69
Clhc1-204ENSMUST00000208530 Zbtb12Q9Z150 459 aa10.67□□□□□ -0.7
Clhc1-204ENSMUST00000208530 Abcb7Q61102 752 aaKnown RBP10.64□□□□□ -0.71
Clhc1-204ENSMUST00000208530 Cdca7Q9D0M2 382 aa10.59□□□□□ -0.71
Clhc1-204ENSMUST00000208530 Nkx1-1G3UXB3 402 aa10.49□□□□□ -0.73
Clhc1-204ENSMUST00000208530 Clcn6O35454 870 aa10.48□□□□□ -0.73
Clhc1-204ENSMUST00000208530 Gtpbp6Q3U6U5 514 aa10.48□□□□□ -0.73
Clhc1-204ENSMUST00000208530 C1qtnf12Q8R2Z0 308 aa10.42□□□□□ -0.74
Clhc1-204ENSMUST00000208530 Pip4p2Q9CZX7 257 aa10.29□□□□□ -0.76
Clhc1-204ENSMUST00000208530 Kank3Q9Z1P7 791 aa10.24□□□□□ -0.77
Clhc1-204ENSMUST00000208530 Trim41Q5NCC3 630 aa10.18□□□□□ -0.78
Clhc1-204ENSMUST00000208530 Pitpnm1O35954 1243 aa10.11□□□□□ -0.79
Clhc1-204ENSMUST00000208530 Ms4a5Q810P8 197 aa10.05□□□□□ -0.8
Clhc1-204ENSMUST00000208530 Trim35Q8C006 501 aa10□□□□□ -0.81
Clhc1-204ENSMUST00000208530 Riok3Q9DBU3 519 aaKnown RBP9.97□□□□□ -0.81
Clhc1-204ENSMUST00000208530 Npm2Q80W85 207 aa9.96□□□□□ -0.81
Clhc1-204ENSMUST00000208530 Fbln2P37889 1221 aa9.94□□□□□ -0.82
Clhc1-204ENSMUST00000208530 Foxp4Q9DBY0 795 aaKnown RBP9.91□□□□□ -0.82
Clhc1-204ENSMUST00000208530 Nlrp6Q91WS2 869 aa9.86□□□□□ -0.83
Clhc1-204ENSMUST00000208530 MyclP10166 368 aa9.85□□□□□ -0.83
Clhc1-204ENSMUST00000208530 Skida1Q80YR3 822 aa9.84□□□□□ -0.83
Clhc1-204ENSMUST00000208530 ArntlQ9WTL8 632 aa9.79□□□□□ -0.84
Clhc1-204ENSMUST00000208530 Npm3Q9CPP0 175 aaKnown RBP9.75□□□□□ -0.85
Clhc1-204ENSMUST00000208530 Dok7Q18PE0 504 aa9.71□□□□□ -0.85
Clhc1-204ENSMUST00000208530 Cadps2Q8BYR5 1297 aa9.68□□□□□ -0.86
Clhc1-204ENSMUST00000208530 MpndQ3TV65 487 aa9.65□□□□□ -0.86
Clhc1-204ENSMUST00000208530 Nyap1Q6PFX7 833 aa9.64□□□□□ -0.87
Clhc1-204ENSMUST00000208530 Evx2P49749 475 aa9.6□□□□□ -0.87
Clhc1-204ENSMUST00000208530 SnphQ80U23 495 aa9.6□□□□□ -0.87
Clhc1-204ENSMUST00000208530 Gjc2Q8BQU6 440 aa9.53□□□□□ -0.88
Clhc1-204ENSMUST00000208530 Fam71e1A1L3C1 212 aa9.52□□□□□ -0.89
Clhc1-204ENSMUST00000208530 Prm3Q62100 101 aa9.51□□□□□ -0.89
Clhc1-204ENSMUST00000208530 AcrbpQ3V140 540 aa9.47□□□□□ -0.89
Clhc1-204ENSMUST00000208530 Fxr2Q9WVR4 673 aaKnown RBP9.46□□□□□ -0.89
Clhc1-204ENSMUST00000208530 Styxl1Q9DAR2 321 aa9.4□□□□□ -0.9
Clhc1-204ENSMUST00000208530 Ehmt2Q9Z148 1263 aaKnown RBP9.38□□□□□ -0.91
Clhc1-204ENSMUST00000208530 Hnrnpul2Q00PI9 745 aaKnown RBP9.38□□□□□ -0.91
Clhc1-204ENSMUST00000208530 Lrrc43Q3V0L5 667 aa9.38□□□□□ -0.91
Clhc1-204ENSMUST00000208530 Map3k10Q66L42 940 aa9.37□□□□□ -0.91
Clhc1-204ENSMUST00000208530 Pde4cQ3UEI1 686 aa9.35□□□□□ -0.91
Clhc1-204ENSMUST00000208530 Jarid2Q62315 1234 aa9.33□□□□□ -0.92
Clhc1-204ENSMUST00000208530 Znf710Q3U288 666 aa9.31□□□□□ -0.92
Clhc1-204ENSMUST00000208530 Zranb1Q7M760 708 aa9.3□□□□□ -0.92
Clhc1-204ENSMUST00000208530 Kiaa1522A2A7S8 1013 aa9.26□□□□□ -0.93
Clhc1-204ENSMUST00000208530 Lhx8O35652 367 aa9.2□□□□□ -0.94
Clhc1-204ENSMUST00000208530 TMEM121BQ99MX7 572 aa9.19□□□□□ -0.94
Clhc1-204ENSMUST00000208530 Rtn4Q99P72 1162 aaKnown RBP9.16□□□□□ -0.94
Clhc1-204ENSMUST00000208530 Sra1Q80VJ2 232 aa9.13□□□□□ -0.95
Clhc1-204ENSMUST00000208530 Ppp1r37Q8BKR5 712 aa9.12□□□□□ -0.95
Clhc1-204ENSMUST00000208530 Rnf225Q9D7D1 332 aa9.12□□□□□ -0.95
Clhc1-204ENSMUST00000208530 OsbpQ3B7Z2 805 aa9.07□□□□□ -0.96
Clhc1-204ENSMUST00000208530 Tcf3P15806 651 aa9.02□□□□□ -0.97
Clhc1-204ENSMUST00000208530 Dcbld2Q91ZV3 769 aa9□□□□□ -0.97
Clhc1-204ENSMUST00000208530 Dmrta2A2A9A2 531 aa8.99□□□□□ -0.97
Clhc1-204ENSMUST00000208530 Krtap4-1Q3UUY3 169 aa8.97□□□□□ -0.97
Clhc1-204ENSMUST00000208530 CrebzfQ91ZR3 358 aa8.97□□□□□ -0.97
Clhc1-204ENSMUST00000208530 Tshz2Q68FE9 1030 aa8.95□□□□□ -0.98
Clhc1-204ENSMUST00000208530 PygbQ8CI94 843 aaKnown RBP8.94□□□□□ -0.98
Clhc1-204ENSMUST00000208530 ZxdbA2CE44 873 aa8.92□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms