RNA–Protein interactions for RNA: ENSMUST00000198230.1

Gm42947-201, mousemouse

TSL 2 BASIC

Gene Gm42947, Length 675 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42947-201ENSMUST00000198230 Chic1Q8CBW7 227 aa30.44■■■□□ 2.46
Gm42947-201ENSMUST00000198230 Mapk8ip2Q9ERE9 830 aa30.08■■■□□ 2.41
Gm42947-201ENSMUST00000198230 Phf23Q8BSN5 401 aa27.32■■□□□ 1.96
Gm42947-201ENSMUST00000198230 Plppr3Q7TPB0 716 aa26.07■■□□□ 1.76
Gm42947-201ENSMUST00000198230 Gab3Q8BSM5 595 aa26.06■■□□□ 1.76
Gm42947-201ENSMUST00000198230 Senp3Q9EP97 568 aaKnown RBP24.9■■□□□ 1.58
Gm42947-201ENSMUST00000198230 Kcna4Q61423 654 aa23.52■■□□□ 1.36
Gm42947-201ENSMUST00000198230 Fam163aQ8CAA5 168 aa22.49■■□□□ 1.19
Gm42947-201ENSMUST00000198230 Hoxd11P23813 323 aa22.06■■□□□ 1.12
Gm42947-201ENSMUST00000198230 Trap1aP19473 224 aa22.01■■□□□ 1.11
Gm42947-201ENSMUST00000198230 Znf219Q6IQX8 726 aa21.31■■□□□ 1
Gm42947-201ENSMUST00000198230 Dmrt2Q8BG36 561 aa20.97■□□□□ 0.95
Gm42947-201ENSMUST00000198230 Chrna2Q91X60 512 aa20.9■□□□□ 0.94
Gm42947-201ENSMUST00000198230 Rsph4aQ8BYM7 716 aa20.75■□□□□ 0.91
Gm42947-201ENSMUST00000198230 ArsiQ32KI9 573 aa20.71■□□□□ 0.91
Gm42947-201ENSMUST00000198230 Rimbp2Q80U40 1072 aa20.49■□□□□ 0.87
Gm42947-201ENSMUST00000198230 Ppargc1bQ8VHJ7 1014 aa20.29■□□□□ 0.84
Gm42947-201ENSMUST00000198230 Dnajc5bQ9CQ94 199 aa20.21■□□□□ 0.83
Gm42947-201ENSMUST00000198230 Akt1s1Q9D1F4 257 aa20.16■□□□□ 0.82
Gm42947-201ENSMUST00000198230 Atf5O70191 283 aa20.08■□□□□ 0.81
Gm42947-201ENSMUST00000198230 Slc4a1apE9PX68 744 aa19.91■□□□□ 0.78
Gm42947-201ENSMUST00000198230 Ppp4r2Q0VGB7 417 aa19.85■□□□□ 0.77
Gm42947-201ENSMUST00000198230 Hs6st3Q9QYK4 470 aa19.85■□□□□ 0.77
Gm42947-201ENSMUST00000198230 Slc34a2Q9DBP0 697 aa19.75■□□□□ 0.75
Gm42947-201ENSMUST00000198230 Bach1P97302 739 aa19.33■□□□□ 0.68
Gm42947-201ENSMUST00000198230 1700123L14RikQ3V2K7 440 aa19.21■□□□□ 0.67
Gm42947-201ENSMUST00000198230 Sox12Q04890 314 aa19.15■□□□□ 0.66
Gm42947-201ENSMUST00000198230 WdpcpQ8C456 722 aa18.74■□□□□ 0.59
Gm42947-201ENSMUST00000198230 Znf704Q9ERQ3 566 aa18.57■□□□□ 0.56
Gm42947-201ENSMUST00000198230 GapdhsQ64467 440 aa18.54■□□□□ 0.56
Gm42947-201ENSMUST00000198230 Slc4a5E9Q3M5 1116 aa18.47■□□□□ 0.55
Gm42947-201ENSMUST00000198230 Egfem1Q8C088 590 aa18.31■□□□□ 0.52
Gm42947-201ENSMUST00000198230 Ifnlr1Q8CGK5 535 aa18.27■□□□□ 0.52
Gm42947-201ENSMUST00000198230 Grwd1Q810D6 446 aaKnown RBP18.26■□□□□ 0.51
Gm42947-201ENSMUST00000198230 Zbtb7aO88939 569 aaKnown RBP18.25■□□□□ 0.51
Gm42947-201ENSMUST00000198230 C1qtnf12Q8R2Z0 308 aa18.23■□□□□ 0.51
Gm42947-201ENSMUST00000198230 G430095P16RikE9Q913 147 aa18.19■□□□□ 0.5
Gm42947-201ENSMUST00000198230 Cdca7Q9D0M2 382 aa18.06■□□□□ 0.48
Gm42947-201ENSMUST00000198230 Abcb7Q61102 752 aaKnown RBP17.95■□□□□ 0.46
Gm42947-201ENSMUST00000198230 Nlrp6Q91WS2 869 aa17.95■□□□□ 0.46
Gm42947-201ENSMUST00000198230 Fam71e1A1L3C1 212 aa17.89■□□□□ 0.45
Gm42947-201ENSMUST00000198230 Rnf216P58283 853 aa17.84■□□□□ 0.45
Gm42947-201ENSMUST00000198230 Ms4a5Q810P8 197 aa17.83■□□□□ 0.44
Gm42947-201ENSMUST00000198230 Zbtb12Q9Z150 459 aa17.83■□□□□ 0.44
Gm42947-201ENSMUST00000198230 Riok3Q9DBU3 519 aaKnown RBP17.74■□□□□ 0.43
Gm42947-201ENSMUST00000198230 Gtpbp6Q3U6U5 514 aa17.67■□□□□ 0.42
Gm42947-201ENSMUST00000198230 Trim41Q5NCC3 630 aa17.64■□□□□ 0.41
Gm42947-201ENSMUST00000198230 Nkx1-1G3UXB3 402 aa17.61■□□□□ 0.41
Gm42947-201ENSMUST00000198230 Npm2Q80W85 207 aa17.6■□□□□ 0.41
Gm42947-201ENSMUST00000198230 MyclP10166 368 aa17.53■□□□□ 0.4
Gm42947-201ENSMUST00000198230 AcrbpQ3V140 540 aa17.51■□□□□ 0.39
Gm42947-201ENSMUST00000198230 Pde4cQ3UEI1 686 aa17.43■□□□□ 0.38
Gm42947-201ENSMUST00000198230 Znf703P0CL69 594 aa17.3■□□□□ 0.36
Gm42947-201ENSMUST00000198230 Prm3Q62100 101 aa17.24■□□□□ 0.35
Gm42947-201ENSMUST00000198230 Cacnb1Q8R3Z5 597 aa17.24■□□□□ 0.35
Gm42947-201ENSMUST00000198230 Kcnn1Q9EQR3 537 aa17.24■□□□□ 0.35
Gm42947-201ENSMUST00000198230 Ildr2B5TVM2 661 aa17.22■□□□□ 0.35
Gm42947-201ENSMUST00000198230 Prr29B1ARI9 187 aa17.21■□□□□ 0.35
Gm42947-201ENSMUST00000198230 Fbln2P37889 1221 aa17.19■□□□□ 0.34
Gm42947-201ENSMUST00000198230 Styxl1Q9DAR2 321 aa17.08■□□□□ 0.32
Gm42947-201ENSMUST00000198230 Npm3Q9CPP0 175 aaKnown RBP17.03■□□□□ 0.32
Gm42947-201ENSMUST00000198230 MpndQ3TV65 487 aa16.97■□□□□ 0.31
Gm42947-201ENSMUST00000198230 Rtn4Q99P72 1162 aaKnown RBP16.94■□□□□ 0.3
Gm42947-201ENSMUST00000198230 Ube2uB1AUC4 352 aa16.93■□□□□ 0.3
Gm42947-201ENSMUST00000198230 Pitpnm1O35954 1243 aa16.92■□□□□ 0.3
Gm42947-201ENSMUST00000198230 Tshz2Q68FE9 1030 aa16.89■□□□□ 0.29
Gm42947-201ENSMUST00000198230 Pip4p2Q9CZX7 257 aa16.86■□□□□ 0.29
Gm42947-201ENSMUST00000198230 Skida1Q80YR3 822 aa16.83■□□□□ 0.28
Gm42947-201ENSMUST00000198230 Kank3Q9Z1P7 791 aa16.83■□□□□ 0.28
Gm42947-201ENSMUST00000198230 Trim35Q8C006 501 aa16.81■□□□□ 0.28
Gm42947-201ENSMUST00000198230 Clcn6O35454 870 aa16.73■□□□□ 0.27
Gm42947-201ENSMUST00000198230 Ppp1r37Q8BKR5 712 aa16.42■□□□□ 0.22
Gm42947-201ENSMUST00000198230 Cadps2Q8BYR5 1297 aa16.42■□□□□ 0.22
Gm42947-201ENSMUST00000198230 Tcf3P15806 651 aa16.39■□□□□ 0.21
Gm42947-201ENSMUST00000198230 Lrrc43Q3V0L5 667 aa16.37■□□□□ 0.21
Gm42947-201ENSMUST00000198230 Nyap1Q6PFX7 833 aa16.34■□□□□ 0.21
Gm42947-201ENSMUST00000198230 Jarid2Q62315 1234 aa16.33■□□□□ 0.2
Gm42947-201ENSMUST00000198230 Dok7Q18PE0 504 aa16.09■□□□□ 0.17
Gm42947-201ENSMUST00000198230 SnphQ80U23 495 aa16.09■□□□□ 0.17
Gm42947-201ENSMUST00000198230 Hnrnpul2Q00PI9 745 aaKnown RBP15.99■□□□□ 0.15
Gm42947-201ENSMUST00000198230 Sra1Q80VJ2 232 aa15.96■□□□□ 0.15
Gm42947-201ENSMUST00000198230 Foxp4Q9DBY0 795 aaKnown RBP15.96■□□□□ 0.15
Gm42947-201ENSMUST00000198230 ArntlQ9WTL8 632 aa15.81■□□□□ 0.12
Gm42947-201ENSMUST00000198230 Ehmt2Q9Z148 1263 aaKnown RBP15.79■□□□□ 0.12
Gm42947-201ENSMUST00000198230 Ecm2Q5FW85 670 aa15.77■□□□□ 0.12
Gm42947-201ENSMUST00000198230 MycnP03966 462 aaKnown RBP15.74■□□□□ 0.11
Gm42947-201ENSMUST00000198230 Hdac5Q9Z2V6 1113 aa15.66■□□□□ 0.1
Gm42947-201ENSMUST00000198230 Pde4dQ01063 747 aa15.65■□□□□ 0.1
Gm42947-201ENSMUST00000198230 CrebzfQ91ZR3 358 aa15.63■□□□□ 0.09
Gm42947-201ENSMUST00000198230 PygbQ8CI94 843 aaKnown RBP15.62■□□□□ 0.09
Gm42947-201ENSMUST00000198230 Zranb1Q7M760 708 aa15.61■□□□□ 0.09
Gm42947-201ENSMUST00000198230 Gjc2Q8BQU6 440 aa15.6■□□□□ 0.09
Gm42947-201ENSMUST00000198230 Repin1Q5U4E2 545 aa15.59■□□□□ 0.09
Gm42947-201ENSMUST00000198230 Fam117bQ3U3E2 584 aa15.56■□□□□ 0.08
Gm42947-201ENSMUST00000198230 Zbtb7bQ64321 544 aa15.56■□□□□ 0.08
Gm42947-201ENSMUST00000198230 Map3k10Q66L42 940 aa15.54■□□□□ 0.08
Gm42947-201ENSMUST00000198230 Atad2Q8CDM1 1040 aa15.49■□□□□ 0.07
Gm42947-201ENSMUST00000198230 Gm13697A2AK42 830 aa15.46■□□□□ 0.07
Gm42947-201ENSMUST00000198230 Znf710Q3U288 666 aa15.43■□□□□ 0.06
Gm42947-201ENSMUST00000198230 Pdap1Q3UHX2 181 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 127.7 ms