RNA–Protein interactions for RNA: ENSMUST00000197648.1

Gm42488-201, mousemouse

TSL 1 (best) BASIC

Gene Gm42488, Length 3,225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42488-201ENSMUST00000197648 Gm35339A0A140LHH9 1649 aa20.54■□□□□ 0.88
Gm42488-201ENSMUST00000197648 NischQ80TM9 1593 aa19.39■□□□□ 0.69
Gm42488-201ENSMUST00000197648 Abcc8B2RUS7 1588 aa19.02■□□□□ 0.63
Gm42488-201ENSMUST00000197648 Abcc9P70170 1546 aa18.97■□□□□ 0.63
Gm42488-201ENSMUST00000197648 ScribQ80U72 1612 aa18.53■□□□□ 0.56
Gm42488-201ENSMUST00000197648 NacadQ5SWP3 1504 aa17.97■□□□□ 0.47
Gm42488-201ENSMUST00000197648 Dcaf1Q80TR8 1506 aa17.86■□□□□ 0.45
Gm42488-201ENSMUST00000197648 Kdm5dQ62240 1548 aa17.73■□□□□ 0.43
Gm42488-201ENSMUST00000197648 Sycp2Q9CUU3 1500 aa17.62■□□□□ 0.41
Gm42488-201ENSMUST00000197648 Rhox8Q6VSS7 320 aa17.59■□□□□ 0.41
Gm42488-201ENSMUST00000197648 Ccdc180J3QNE4 1664 aa17.42■□□□□ 0.38
Gm42488-201ENSMUST00000197648 BicraF8VPZ9 1578 aa17.36■□□□□ 0.37
Gm42488-201ENSMUST00000197648 Thoc2B1AZI6 1594 aaKnown RBP17.18■□□□□ 0.34
Gm42488-201ENSMUST00000197648 Baz1bQ9Z277 1479 aa17.17■□□□□ 0.34
Gm42488-201ENSMUST00000197648 Crybg2B7ZCC2 1516 aa17.16■□□□□ 0.34
Gm42488-201ENSMUST00000197648 Pds5bQ4VA53 1446 aaKnown RBP17■□□□□ 0.31
Gm42488-201ENSMUST00000197648 Rb1cc1Q9ESK9 1588 aa16.85■□□□□ 0.29
Gm42488-201ENSMUST00000197648 Atad2bE9Q166 1460 aaKnown RBP16.76■□□□□ 0.27
Gm42488-201ENSMUST00000197648 Baz1aO88379 1555 aa16.76■□□□□ 0.27
Gm42488-201ENSMUST00000197648 Fam135aQ6NS59 1506 aa16.74■□□□□ 0.27
Gm42488-201ENSMUST00000197648 Smarca2Q6DIC0 1577 aa16.69■□□□□ 0.26
Gm42488-201ENSMUST00000197648 Ehmt2Q9Z148 1263 aaKnown RBP16.67■□□□□ 0.26
Gm42488-201ENSMUST00000197648 Dnajc5bQ9CQ94 199 aa16.59■□□□□ 0.25
Gm42488-201ENSMUST00000197648 Rpgrip1Q9EPQ2 1331 aa16.57■□□□□ 0.24
Gm42488-201ENSMUST00000197648 Cc2d2aQ8CFW7 1633 aa16.52■□□□□ 0.24
Gm42488-201ENSMUST00000197648 Ercc6F8VPZ5 1481 aa16.49■□□□□ 0.23
Gm42488-201ENSMUST00000197648 Smarca4Q3TKT4 1613 aaKnown RBP16.48■□□□□ 0.23
Gm42488-201ENSMUST00000197648 Rtl1Q7M732 1744 aa16.44■□□□□ 0.22
Gm42488-201ENSMUST00000197648 Wdr62Q3U3T8 1523 aa16.38■□□□□ 0.21
Gm42488-201ENSMUST00000197648 Iqgap2Q3UQ44 1575 aa16.35■□□□□ 0.21
Gm42488-201ENSMUST00000197648 Acin1Q9JIX8 1338 aaKnown RBP16.27■□□□□ 0.2
Gm42488-201ENSMUST00000197648 Ccdc136Q3TVA9 1136 aa16.24■□□□□ 0.19
Gm42488-201ENSMUST00000197648 Phldb1Q6PDH0 1371 aaKnown RBP16.2■□□□□ 0.18
Gm42488-201ENSMUST00000197648 Frmpd1A2AKB4 1549 aa16.18■□□□□ 0.18
Gm42488-201ENSMUST00000197648 Unc13aQ4KUS2 1712 aa16.14■□□□□ 0.18
Gm42488-201ENSMUST00000197648 Mrc2Q64449 1479 aa16.03■□□□□ 0.16
Gm42488-201ENSMUST00000197648 Pcgf6Q99NA9 353 aa15.97■□□□□ 0.15
Gm42488-201ENSMUST00000197648 Zcchc6Q5BLK4 1491 aaKnown RBP15.95■□□□□ 0.14
Gm42488-201ENSMUST00000197648 Cttnbp2B9EJA2 1648 aa15.94■□□□□ 0.14
Gm42488-201ENSMUST00000197648 HrcG5E8J6 738 aa15.9■□□□□ 0.14
Gm42488-201ENSMUST00000197648 Cecr2E9Q2Z1 1453 aa15.89■□□□□ 0.13
Gm42488-201ENSMUST00000197648 Trim41Q5NCC3 630 aa15.87■□□□□ 0.13
Gm42488-201ENSMUST00000197648 Dnajc5P60904 198 aa15.85■□□□□ 0.13
Gm42488-201ENSMUST00000197648 Shroom2A2ALU4 1481 aa15.77■□□□□ 0.12
Gm42488-201ENSMUST00000197648 Rsf1E9PWW9 1441 aaKnown RBP15.74■□□□□ 0.11
Gm42488-201ENSMUST00000197648 Lrriq1Q0P5X1 1673 aa15.73■□□□□ 0.11
Gm42488-201ENSMUST00000197648 Eif4g3Q80XI3 1579 aaKnown RBP15.73■□□□□ 0.11
Gm42488-201ENSMUST00000197648 CftrP26361 1476 aa15.71■□□□□ 0.1
Gm42488-201ENSMUST00000197648 Supt5hO55201 1082 aaKnown RBP15.68■□□□□ 0.1
Gm42488-201ENSMUST00000197648 Zeb1Q64318 1117 aa15.62■□□□□ 0.09
Gm42488-201ENSMUST00000197648 Gab3Q8BSM5 595 aa15.61■□□□□ 0.09
Gm42488-201ENSMUST00000197648 Lamc3Q9R0B6 1581 aa15.59■□□□□ 0.09
Gm42488-201ENSMUST00000197648 Brd4Q9ESU6 1400 aaKnown RBP15.57■□□□□ 0.08
Gm42488-201ENSMUST00000197648 Synj1Q8CHC4 1574 aa15.57■□□□□ 0.08
Gm42488-201ENSMUST00000197648 Ubl4bQ9CQ84 188 aa15.53■□□□□ 0.08
Gm42488-201ENSMUST00000197648 Zcchc11B2RX14 1644 aaKnown RBP15.51■□□□□ 0.07
Gm42488-201ENSMUST00000197648 Kif21aQ9QXL2 1672 aa15.5■□□□□ 0.07
Gm42488-201ENSMUST00000197648 Cngb1E1AZ71 1325 aa15.49■□□□□ 0.07
Gm42488-201ENSMUST00000197648 TnnQ80Z71 1560 aa15.42■□□□□ 0.06
Gm42488-201ENSMUST00000197648 Gpatch8A2A6A1 1505 aa15.41■□□□□ 0.06
Gm42488-201ENSMUST00000197648 Col17a1Q07563 1470 aa15.38■□□□□ 0.05
Gm42488-201ENSMUST00000197648 Neurod1Q60867 357 aa15.38■□□□□ 0.05
Gm42488-201ENSMUST00000197648 Pbrm1Q8BSQ9 1634 aaKnown RBP15.33■□□□□ 0.04
Gm42488-201ENSMUST00000197648 Cux2P70298 1426 aa15.31■□□□□ 0.04
Gm42488-201ENSMUST00000197648 Top2bQ64511 1612 aa15.31■□□□□ 0.04
Gm42488-201ENSMUST00000197648 Chic1Q8CBW7 227 aa15.25■□□□□ 0.03
Gm42488-201ENSMUST00000197648 Rusc2Q80U22 1514 aa15.24■□□□□ 0.03
Gm42488-201ENSMUST00000197648 Mier1Q5UAK0 511 aa15.22■□□□□ 0.03
Gm42488-201ENSMUST00000197648 Cep164Q5DU05 1446 aa15.22■□□□□ 0.03
Gm42488-201ENSMUST00000197648 Ift140E9PY46 1464 aa15.2■□□□□ 0.02
Gm42488-201ENSMUST00000197648 Wdr66E9Q743 1299 aa15.19■□□□□ 0.02
Gm42488-201ENSMUST00000197648 Urb2E9Q7L1 1524 aaKnown RBP15.18■□□□□ 0.02
Gm42488-201ENSMUST00000197648 NefmP08553 848 aa15.18■□□□□ 0.02
Gm42488-201ENSMUST00000197648 Sall2Q9QX96 1004 aa15.15■□□□□ 0.02
Gm42488-201ENSMUST00000197648 Crocc2F6XLV1 1638 aa15.15■□□□□ 0.02
Gm42488-201ENSMUST00000197648 Kif15Q6P9L6 1387 aa15.13■□□□□ 0.01
Gm42488-201ENSMUST00000197648 Las1lA2BE28 776 aaKnown RBP15.12■□□□□ 0.01
Gm42488-201ENSMUST00000197648 Ppargc1bQ8VHJ7 1014 aa15.12■□□□□ 0.01
Gm42488-201ENSMUST00000197648 UbtfP25976 765 aaKnown RBP15.11■□□□□ 0.01
Gm42488-201ENSMUST00000197648 Esf1Q3V1V3 845 aaKnown RBP15.11■□□□□ 0.01
Gm42488-201ENSMUST00000197648 Camsap1A2AHC3 1581 aa15.1■□□□□ 0.01
Gm42488-201ENSMUST00000197648 Myt1Q8CFC2 1127 aa15.07■□□□□ 0
Gm42488-201ENSMUST00000197648 Plb1Q3TTY0 1478 aa15.06■□□□□ 0
Gm42488-201ENSMUST00000197648 Ccdc18Q640L5 1455 aa15.05■□□□□ 0
Gm42488-201ENSMUST00000197648 PogzQ8BZH4 1409 aaKnown RBP14.98□□□□□ -0.01
Gm42488-201ENSMUST00000197648 Golga3P55937 1487 aa14.98□□□□□ -0.01
Gm42488-201ENSMUST00000197648 Arhgef5E9Q7D5 1581 aa14.98□□□□□ -0.01
Gm42488-201ENSMUST00000197648 Dhx29Q6PGC1 1365 aaKnown RBP14.98□□□□□ -0.01
Gm42488-201ENSMUST00000197648 Nup160Q9Z0W3 1402 aaKnown RBP14.97□□□□□ -0.01
Gm42488-201ENSMUST00000197648 LrpprcQ6PB66 1392 aaKnown RBP14.97□□□□□ -0.01
Gm42488-201ENSMUST00000197648 Myt1lP97500 1187 aa14.97□□□□□ -0.01
Gm42488-201ENSMUST00000197648 Cc2d2bA0A286YDU8 1405 aa14.95□□□□□ -0.02
Gm42488-201ENSMUST00000197648 Csrnp3P59055 597 aa14.94□□□□□ -0.02
Gm42488-201ENSMUST00000197648 Pabpn1Q8CCS6 302 aaKnown RBP14.91□□□□□ -0.02
Gm42488-201ENSMUST00000197648 Setd1bQ8CFT2 1985 aa14.88□□□□□ -0.03
Gm42488-201ENSMUST00000197648 Aebp2Q9Z248 504 aaKnown RBP14.88□□□□□ -0.03
Gm42488-201ENSMUST00000197648 Fmn1Q05860 1466 aa14.87□□□□□ -0.03
Gm42488-201ENSMUST00000197648 DiexfQ8BTT6 772 aaKnown RBP14.86□□□□□ -0.03
Gm42488-201ENSMUST00000197648 Ccdc88bQ4QRL3 1481 aa14.86□□□□□ -0.03
Gm42488-201ENSMUST00000197648 1700123L14RikQ3V2K7 440 aa14.86□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms