RNA–Protein interactions for RNA: ENSMUST00000187956.1

Gm28209-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28209, Length 775 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28209-201ENSMUST00000187956 Mapk8ip2Q9ERE9 830 aa26.95■■□□□ 1.9
Gm28209-201ENSMUST00000187956 Chic1Q8CBW7 227 aa25.13■■□□□ 1.61
Gm28209-201ENSMUST00000187956 Phf23Q8BSN5 401 aa22.52■■□□□ 1.2
Gm28209-201ENSMUST00000187956 Fam163aQ8CAA5 168 aa20.8■□□□□ 0.92
Gm28209-201ENSMUST00000187956 Gab3Q8BSM5 595 aa20.69■□□□□ 0.9
Gm28209-201ENSMUST00000187956 GapdhsQ64467 440 aa20■□□□□ 0.79
Gm28209-201ENSMUST00000187956 Plppr3Q7TPB0 716 aa19.76■□□□□ 0.75
Gm28209-201ENSMUST00000187956 Senp3Q9EP97 568 aaKnown RBP19.73■□□□□ 0.75
Gm28209-201ENSMUST00000187956 ArsiQ32KI9 573 aa18.58■□□□□ 0.56
Gm28209-201ENSMUST00000187956 Slc34a2Q9DBP0 697 aa18.27■□□□□ 0.52
Gm28209-201ENSMUST00000187956 Hoxd11P23813 323 aa18.15■□□□□ 0.5
Gm28209-201ENSMUST00000187956 Znf219Q6IQX8 726 aa17.74■□□□□ 0.43
Gm28209-201ENSMUST00000187956 Trap1aP19473 224 aa17.17■□□□□ 0.34
Gm28209-201ENSMUST00000187956 Dnajc5bQ9CQ94 199 aa17.14■□□□□ 0.33
Gm28209-201ENSMUST00000187956 Akt1s1Q9D1F4 257 aa16.93■□□□□ 0.3
Gm28209-201ENSMUST00000187956 Rimbp2Q80U40 1072 aa16.63■□□□□ 0.25
Gm28209-201ENSMUST00000187956 Znf704Q9ERQ3 566 aa16.63■□□□□ 0.25
Gm28209-201ENSMUST00000187956 Rsph4aQ8BYM7 716 aa16.62■□□□□ 0.25
Gm28209-201ENSMUST00000187956 Slc4a5E9Q3M5 1116 aa16.6■□□□□ 0.25
Gm28209-201ENSMUST00000187956 Kcna4Q61423 654 aa16.59■□□□□ 0.25
Gm28209-201ENSMUST00000187956 Chrna2Q91X60 512 aa16.59■□□□□ 0.25
Gm28209-201ENSMUST00000187956 Cacnb1Q8R3Z5 597 aa16.48■□□□□ 0.23
Gm28209-201ENSMUST00000187956 Ildr2B5TVM2 661 aa15.84■□□□□ 0.13
Gm28209-201ENSMUST00000187956 Znf703P0CL69 594 aa15.8■□□□□ 0.12
Gm28209-201ENSMUST00000187956 Prr29B1ARI9 187 aa15.13■□□□□ 0.01
Gm28209-201ENSMUST00000187956 Sox12Q04890 314 aa15.01□□□□□ -0.01
Gm28209-201ENSMUST00000187956 Kcnn1Q9EQR3 537 aa14.99□□□□□ -0.01
Gm28209-201ENSMUST00000187956 Bach1P97302 739 aa14.9□□□□□ -0.02
Gm28209-201ENSMUST00000187956 Atf5O70191 283 aa14.87□□□□□ -0.03
Gm28209-201ENSMUST00000187956 Egfem1Q8C088 590 aa14.83□□□□□ -0.04
Gm28209-201ENSMUST00000187956 Grwd1Q810D6 446 aaKnown RBP14.81□□□□□ -0.04
Gm28209-201ENSMUST00000187956 Zbtb7aO88939 569 aaKnown RBP14.72□□□□□ -0.05
Gm28209-201ENSMUST00000187956 Dmrt2Q8BG36 561 aa14.66□□□□□ -0.06
Gm28209-201ENSMUST00000187956 Evx2P49749 475 aa14.61□□□□□ -0.07
Gm28209-201ENSMUST00000187956 Pip4p2Q9CZX7 257 aa14.6□□□□□ -0.07
Gm28209-201ENSMUST00000187956 Hs6st3Q9QYK4 470 aa14.49□□□□□ -0.09
Gm28209-201ENSMUST00000187956 Abcb7Q61102 752 aaKnown RBP14.46□□□□□ -0.09
Gm28209-201ENSMUST00000187956 Ppp4r2Q0VGB7 417 aa14.32□□□□□ -0.12
Gm28209-201ENSMUST00000187956 Krtap4-1Q3UUY3 169 aa14.25□□□□□ -0.13
Gm28209-201ENSMUST00000187956 Kank3Q9Z1P7 791 aa14.23□□□□□ -0.13
Gm28209-201ENSMUST00000187956 Clcn6O35454 870 aa14.22□□□□□ -0.13
Gm28209-201ENSMUST00000187956 Gm35339A0A140LHH9 1649 aa14.08□□□□□ -0.15
Gm28209-201ENSMUST00000187956 Ppargc1bQ8VHJ7 1014 aa14.05□□□□□ -0.16
Gm28209-201ENSMUST00000187956 Foxp4Q9DBY0 795 aaKnown RBP14.05□□□□□ -0.16
Gm28209-201ENSMUST00000187956 Rnf216P58283 853 aa14.04□□□□□ -0.16
Gm28209-201ENSMUST00000187956 WdpcpQ8C456 722 aa14.03□□□□□ -0.16
Gm28209-201ENSMUST00000187956 ArntlQ9WTL8 632 aa14.01□□□□□ -0.17
Gm28209-201ENSMUST00000187956 Nkx1-1G3UXB3 402 aa14□□□□□ -0.17
Gm28209-201ENSMUST00000187956 Ifnlr1Q8CGK5 535 aa13.97□□□□□ -0.17
Gm28209-201ENSMUST00000187956 G430095P16RikE9Q913 147 aa13.88□□□□□ -0.19
Gm28209-201ENSMUST00000187956 Abcc9P70170 1546 aa13.86□□□□□ -0.19
Gm28209-201ENSMUST00000187956 NischQ80TM9 1593 aa13.81□□□□□ -0.2
Gm28209-201ENSMUST00000187956 Pitpnm1O35954 1243 aa13.8□□□□□ -0.2
Gm28209-201ENSMUST00000187956 Lhx8O35652 367 aa13.77□□□□□ -0.21
Gm28209-201ENSMUST00000187956 Trim35Q8C006 501 aa13.73□□□□□ -0.21
Gm28209-201ENSMUST00000187956 Gtpbp6Q3U6U5 514 aa13.69□□□□□ -0.22
Gm28209-201ENSMUST00000187956 Zbtb12Q9Z150 459 aa13.55□□□□□ -0.24
Gm28209-201ENSMUST00000187956 Cdca7Q9D0M2 382 aa13.5□□□□□ -0.25
Gm28209-201ENSMUST00000187956 Abcc8B2RUS7 1588 aa13.49□□□□□ -0.25
Gm28209-201ENSMUST00000187956 Fxr2Q9WVR4 673 aaKnown RBP13.45□□□□□ -0.26
Gm28209-201ENSMUST00000187956 Gm11555B1AQ89 175 aa13.31□□□□□ -0.28
Gm28209-201ENSMUST00000187956 ScribQ80U72 1612 aa13.21□□□□□ -0.29
Gm28209-201ENSMUST00000187956 Gm11563B1AQ90 168 aa13.19□□□□□ -0.3
Gm28209-201ENSMUST00000187956 Krtap4-7Q9D732 168 aa13.19□□□□□ -0.3
Gm28209-201ENSMUST00000187956 1700123L14RikQ3V2K7 440 aa13.15□□□□□ -0.3
Gm28209-201ENSMUST00000187956 Kiaa1522A2A7S8 1013 aa13.1□□□□□ -0.31
Gm28209-201ENSMUST00000187956 Ehmt2Q9Z148 1263 aaKnown RBP13.05□□□□□ -0.32
Gm28209-201ENSMUST00000187956 Rnf225Q9D7D1 332 aa12.96□□□□□ -0.33
Gm28209-201ENSMUST00000187956 NacadQ5SWP3 1504 aa12.92□□□□□ -0.34
Gm28209-201ENSMUST00000187956 Ms4a5Q810P8 197 aa12.89□□□□□ -0.35
Gm28209-201ENSMUST00000187956 Dok7Q18PE0 504 aa12.87□□□□□ -0.35
Gm28209-201ENSMUST00000187956 Dcbld2Q91ZV3 769 aa12.86□□□□□ -0.35
Gm28209-201ENSMUST00000187956 C1qtnf12Q8R2Z0 308 aa12.82□□□□□ -0.36
Gm28209-201ENSMUST00000187956 Slc4a1apE9PX68 744 aa12.77□□□□□ -0.37
Gm28209-201ENSMUST00000187956 Kdm5dQ62240 1548 aa12.75□□□□□ -0.37
Gm28209-201ENSMUST00000187956 Pelp1Q9DBD5 1123 aaKnown RBP12.7□□□□□ -0.38
Gm28209-201ENSMUST00000187956 Map3k10Q66L42 940 aa12.69□□□□□ -0.38
Gm28209-201ENSMUST00000187956 Gjc2Q8BQU6 440 aa12.68□□□□□ -0.38
Gm28209-201ENSMUST00000187956 Sycp2Q9CUU3 1500 aa12.65□□□□□ -0.38
Gm28209-201ENSMUST00000187956 Pcdh10E9PXQ7 1057 aa12.58□□□□□ -0.4
Gm28209-201ENSMUST00000187956 Nyap1Q6PFX7 833 aa12.56□□□□□ -0.4
Gm28209-201ENSMUST00000187956 Cadps2Q8BYR5 1297 aa12.52□□□□□ -0.41
Gm28209-201ENSMUST00000187956 Dnajc5P60904 198 aa12.46□□□□□ -0.41
Gm28209-201ENSMUST00000187956 BicraF8VPZ9 1578 aa12.46□□□□□ -0.42
Gm28209-201ENSMUST00000187956 SnphQ80U23 495 aa12.45□□□□□ -0.42
Gm28209-201ENSMUST00000187956 Pds5bQ4VA53 1446 aaKnown RBP12.45□□□□□ -0.42
Gm28209-201ENSMUST00000187956 A0A1Y7VJH8 109 aa12.43□□□□□ -0.42
Gm28209-201ENSMUST00000187956 Fbln2P37889 1221 aa12.4□□□□□ -0.42
Gm28209-201ENSMUST00000187956 Zranb1Q7M760 708 aa12.4□□□□□ -0.42
Gm28209-201ENSMUST00000187956 Thoc2B1AZI6 1594 aaKnown RBP12.36□□□□□ -0.43
Gm28209-201ENSMUST00000187956 St18Q80TY4 1045 aa12.31□□□□□ -0.44
Gm28209-201ENSMUST00000187956 Dcaf1Q80TR8 1506 aa12.31□□□□□ -0.44
Gm28209-201ENSMUST00000187956 Lce6aD3YV94 81 aa12.27□□□□□ -0.45
Gm28209-201ENSMUST00000187956 Hmx1O70218 332 aa12.26□□□□□ -0.45
Gm28209-201ENSMUST00000187956 TMEM121BQ99MX7 572 aa12.25□□□□□ -0.45
Gm28209-201ENSMUST00000187956 Npm3Q9CPP0 175 aaKnown RBP12.2□□□□□ -0.46
Gm28209-201ENSMUST00000187956 Atad2bE9Q166 1460 aaKnown RBP12.17□□□□□ -0.46
Gm28209-201ENSMUST00000187956 Cc2d2aQ8CFW7 1633 aa12.16□□□□□ -0.46
Gm28209-201ENSMUST00000187956 Znf710Q3U288 666 aa12.16□□□□□ -0.46
Gm28209-201ENSMUST00000187956 Ercc6F8VPZ5 1481 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 10.3 ms