RNA–Protein interactions for RNA: ENSMUST00000187956.1

Gm28209-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28209, Length 775 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28209-201ENSMUST00000187956 Mapk8ip2Q9ERE9 830 aa26.95■■□□□ 1.9
Gm28209-201ENSMUST00000187956 Chic1Q8CBW7 227 aa25.13■■□□□ 1.61
Gm28209-201ENSMUST00000187956 Phf23Q8BSN5 401 aa22.52■■□□□ 1.2
Gm28209-201ENSMUST00000187956 Fam163aQ8CAA5 168 aa20.8■□□□□ 0.92
Gm28209-201ENSMUST00000187956 Gab3Q8BSM5 595 aa20.69■□□□□ 0.9
Gm28209-201ENSMUST00000187956 GapdhsQ64467 440 aa20■□□□□ 0.79
Gm28209-201ENSMUST00000187956 Plppr3Q7TPB0 716 aa19.76■□□□□ 0.75
Gm28209-201ENSMUST00000187956 Senp3Q9EP97 568 aaKnown RBP19.73■□□□□ 0.75
Gm28209-201ENSMUST00000187956 ArsiQ32KI9 573 aa18.58■□□□□ 0.56
Gm28209-201ENSMUST00000187956 Slc34a2Q9DBP0 697 aa18.27■□□□□ 0.52
Gm28209-201ENSMUST00000187956 Hoxd11P23813 323 aa18.15■□□□□ 0.5
Gm28209-201ENSMUST00000187956 Znf219Q6IQX8 726 aa17.74■□□□□ 0.43
Gm28209-201ENSMUST00000187956 Trap1aP19473 224 aa17.17■□□□□ 0.34
Gm28209-201ENSMUST00000187956 Dnajc5bQ9CQ94 199 aa17.14■□□□□ 0.33
Gm28209-201ENSMUST00000187956 Akt1s1Q9D1F4 257 aa16.93■□□□□ 0.3
Gm28209-201ENSMUST00000187956 Rimbp2Q80U40 1072 aa16.63■□□□□ 0.25
Gm28209-201ENSMUST00000187956 Znf704Q9ERQ3 566 aa16.63■□□□□ 0.25
Gm28209-201ENSMUST00000187956 Rsph4aQ8BYM7 716 aa16.62■□□□□ 0.25
Gm28209-201ENSMUST00000187956 Slc4a5E9Q3M5 1116 aa16.6■□□□□ 0.25
Gm28209-201ENSMUST00000187956 Kcna4Q61423 654 aa16.59■□□□□ 0.25
Gm28209-201ENSMUST00000187956 Chrna2Q91X60 512 aa16.59■□□□□ 0.25
Gm28209-201ENSMUST00000187956 Cacnb1Q8R3Z5 597 aa16.48■□□□□ 0.23
Gm28209-201ENSMUST00000187956 Ildr2B5TVM2 661 aa15.84■□□□□ 0.13
Gm28209-201ENSMUST00000187956 Znf703P0CL69 594 aa15.8■□□□□ 0.12
Gm28209-201ENSMUST00000187956 Prr29B1ARI9 187 aa15.13■□□□□ 0.01
Gm28209-201ENSMUST00000187956 Sox12Q04890 314 aa15.01□□□□□ -0.01
Gm28209-201ENSMUST00000187956 Kcnn1Q9EQR3 537 aa14.99□□□□□ -0.01
Gm28209-201ENSMUST00000187956 Bach1P97302 739 aa14.9□□□□□ -0.02
Gm28209-201ENSMUST00000187956 Atf5O70191 283 aa14.87□□□□□ -0.03
Gm28209-201ENSMUST00000187956 Egfem1Q8C088 590 aa14.83□□□□□ -0.04
Gm28209-201ENSMUST00000187956 Grwd1Q810D6 446 aaKnown RBP14.81□□□□□ -0.04
Gm28209-201ENSMUST00000187956 Zbtb7aO88939 569 aaKnown RBP14.72□□□□□ -0.05
Gm28209-201ENSMUST00000187956 Dmrt2Q8BG36 561 aa14.66□□□□□ -0.06
Gm28209-201ENSMUST00000187956 Evx2P49749 475 aa14.61□□□□□ -0.07
Gm28209-201ENSMUST00000187956 Pip4p2Q9CZX7 257 aa14.6□□□□□ -0.07
Gm28209-201ENSMUST00000187956 Hs6st3Q9QYK4 470 aa14.49□□□□□ -0.09
Gm28209-201ENSMUST00000187956 Abcb7Q61102 752 aaKnown RBP14.46□□□□□ -0.09
Gm28209-201ENSMUST00000187956 Ppp4r2Q0VGB7 417 aa14.32□□□□□ -0.12
Gm28209-201ENSMUST00000187956 Krtap4-1Q3UUY3 169 aa14.25□□□□□ -0.13
Gm28209-201ENSMUST00000187956 Kank3Q9Z1P7 791 aa14.23□□□□□ -0.13
Gm28209-201ENSMUST00000187956 Clcn6O35454 870 aa14.22□□□□□ -0.13
Gm28209-201ENSMUST00000187956 Gm35339A0A140LHH9 1649 aa14.08□□□□□ -0.15
Gm28209-201ENSMUST00000187956 Ppargc1bQ8VHJ7 1014 aa14.05□□□□□ -0.16
Gm28209-201ENSMUST00000187956 Foxp4Q9DBY0 795 aaKnown RBP14.05□□□□□ -0.16
Gm28209-201ENSMUST00000187956 Rnf216P58283 853 aa14.04□□□□□ -0.16
Gm28209-201ENSMUST00000187956 WdpcpQ8C456 722 aa14.03□□□□□ -0.16
Gm28209-201ENSMUST00000187956 ArntlQ9WTL8 632 aa14.01□□□□□ -0.17
Gm28209-201ENSMUST00000187956 Nkx1-1G3UXB3 402 aa14□□□□□ -0.17
Gm28209-201ENSMUST00000187956 Ifnlr1Q8CGK5 535 aa13.97□□□□□ -0.17
Gm28209-201ENSMUST00000187956 G430095P16RikE9Q913 147 aa13.88□□□□□ -0.19
Gm28209-201ENSMUST00000187956 Abcc9P70170 1546 aa13.86□□□□□ -0.19
Gm28209-201ENSMUST00000187956 NischQ80TM9 1593 aa13.81□□□□□ -0.2
Gm28209-201ENSMUST00000187956 Pitpnm1O35954 1243 aa13.8□□□□□ -0.2
Gm28209-201ENSMUST00000187956 Lhx8O35652 367 aa13.77□□□□□ -0.21
Gm28209-201ENSMUST00000187956 Trim35Q8C006 501 aa13.73□□□□□ -0.21
Gm28209-201ENSMUST00000187956 Gtpbp6Q3U6U5 514 aa13.69□□□□□ -0.22
Gm28209-201ENSMUST00000187956 Zbtb12Q9Z150 459 aa13.55□□□□□ -0.24
Gm28209-201ENSMUST00000187956 Cdca7Q9D0M2 382 aa13.5□□□□□ -0.25
Gm28209-201ENSMUST00000187956 Abcc8B2RUS7 1588 aa13.49□□□□□ -0.25
Gm28209-201ENSMUST00000187956 Fxr2Q9WVR4 673 aaKnown RBP13.45□□□□□ -0.26
Gm28209-201ENSMUST00000187956 Gm11555B1AQ89 175 aa13.31□□□□□ -0.28
Gm28209-201ENSMUST00000187956 ScribQ80U72 1612 aa13.21□□□□□ -0.29
Gm28209-201ENSMUST00000187956 Gm11563B1AQ90 168 aa13.19□□□□□ -0.3
Gm28209-201ENSMUST00000187956 Krtap4-7Q9D732 168 aa13.19□□□□□ -0.3
Gm28209-201ENSMUST00000187956 1700123L14RikQ3V2K7 440 aa13.15□□□□□ -0.3
Gm28209-201ENSMUST00000187956 Kiaa1522A2A7S8 1013 aa13.1□□□□□ -0.31
Gm28209-201ENSMUST00000187956 Ehmt2Q9Z148 1263 aaKnown RBP13.05□□□□□ -0.32
Gm28209-201ENSMUST00000187956 Rnf225Q9D7D1 332 aa12.96□□□□□ -0.33
Gm28209-201ENSMUST00000187956 NacadQ5SWP3 1504 aa12.92□□□□□ -0.34
Gm28209-201ENSMUST00000187956 Ms4a5Q810P8 197 aa12.89□□□□□ -0.35
Gm28209-201ENSMUST00000187956 Dok7Q18PE0 504 aa12.87□□□□□ -0.35
Gm28209-201ENSMUST00000187956 Dcbld2Q91ZV3 769 aa12.86□□□□□ -0.35
Gm28209-201ENSMUST00000187956 C1qtnf12Q8R2Z0 308 aa12.82□□□□□ -0.36
Gm28209-201ENSMUST00000187956 Slc4a1apE9PX68 744 aa12.77□□□□□ -0.37
Gm28209-201ENSMUST00000187956 Kdm5dQ62240 1548 aa12.75□□□□□ -0.37
Gm28209-201ENSMUST00000187956 Pelp1Q9DBD5 1123 aaKnown RBP12.7□□□□□ -0.38
Gm28209-201ENSMUST00000187956 Map3k10Q66L42 940 aa12.69□□□□□ -0.38
Gm28209-201ENSMUST00000187956 Gjc2Q8BQU6 440 aa12.68□□□□□ -0.38
Gm28209-201ENSMUST00000187956 Sycp2Q9CUU3 1500 aa12.65□□□□□ -0.38
Gm28209-201ENSMUST00000187956 Pcdh10E9PXQ7 1057 aa12.58□□□□□ -0.4
Gm28209-201ENSMUST00000187956 Nyap1Q6PFX7 833 aa12.56□□□□□ -0.4
Gm28209-201ENSMUST00000187956 Cadps2Q8BYR5 1297 aa12.52□□□□□ -0.41
Gm28209-201ENSMUST00000187956 Dnajc5P60904 198 aa12.46□□□□□ -0.41
Gm28209-201ENSMUST00000187956 BicraF8VPZ9 1578 aa12.46□□□□□ -0.42
Gm28209-201ENSMUST00000187956 SnphQ80U23 495 aa12.45□□□□□ -0.42
Gm28209-201ENSMUST00000187956 Pds5bQ4VA53 1446 aaKnown RBP12.45□□□□□ -0.42
Gm28209-201ENSMUST00000187956 A0A1Y7VJH8 109 aa12.43□□□□□ -0.42
Gm28209-201ENSMUST00000187956 Fbln2P37889 1221 aa12.4□□□□□ -0.42
Gm28209-201ENSMUST00000187956 Zranb1Q7M760 708 aa12.4□□□□□ -0.42
Gm28209-201ENSMUST00000187956 Thoc2B1AZI6 1594 aaKnown RBP12.36□□□□□ -0.43
Gm28209-201ENSMUST00000187956 St18Q80TY4 1045 aa12.31□□□□□ -0.44
Gm28209-201ENSMUST00000187956 Dcaf1Q80TR8 1506 aa12.31□□□□□ -0.44
Gm28209-201ENSMUST00000187956 Lce6aD3YV94 81 aa12.27□□□□□ -0.45
Gm28209-201ENSMUST00000187956 Hmx1O70218 332 aa12.26□□□□□ -0.45
Gm28209-201ENSMUST00000187956 TMEM121BQ99MX7 572 aa12.25□□□□□ -0.45
Gm28209-201ENSMUST00000187956 Npm3Q9CPP0 175 aaKnown RBP12.2□□□□□ -0.46
Gm28209-201ENSMUST00000187956 Atad2bE9Q166 1460 aaKnown RBP12.17□□□□□ -0.46
Gm28209-201ENSMUST00000187956 Cc2d2aQ8CFW7 1633 aa12.16□□□□□ -0.46
Gm28209-201ENSMUST00000187956 Znf710Q3U288 666 aa12.16□□□□□ -0.46
Gm28209-201ENSMUST00000187956 Ercc6F8VPZ5 1481 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms