RNA–Protein interactions for RNA: ENSMUST00000187956.1

Gm28209-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28209, Length 775 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28209-201ENSMUST00000187956 Mapk8ip2Q9ERE9 830 aa26,95■■□□□ 1,9
Gm28209-201ENSMUST00000187956 Chic1Q8CBW7 227 aa25,13■■□□□ 1,61
Gm28209-201ENSMUST00000187956 Phf23Q8BSN5 401 aa22,52■■□□□ 1,2
Gm28209-201ENSMUST00000187956 Fam163aQ8CAA5 168 aa20,8■□□□□ 0,92
Gm28209-201ENSMUST00000187956 Gab3Q8BSM5 595 aa20,69■□□□□ 0,9
Gm28209-201ENSMUST00000187956 GapdhsQ64467 440 aa20■□□□□ 0,79
Gm28209-201ENSMUST00000187956 Plppr3Q7TPB0 716 aa19,76■□□□□ 0,75
Gm28209-201ENSMUST00000187956 Senp3Q9EP97 568 aaKnown RBP19,73■□□□□ 0,75
Gm28209-201ENSMUST00000187956 ArsiQ32KI9 573 aa18,58■□□□□ 0,56
Gm28209-201ENSMUST00000187956 Slc34a2Q9DBP0 697 aa18,27■□□□□ 0,52
Gm28209-201ENSMUST00000187956 Hoxd11P23813 323 aa18,15■□□□□ 0,5
Gm28209-201ENSMUST00000187956 Znf219Q6IQX8 726 aa17,74■□□□□ 0,43
Gm28209-201ENSMUST00000187956 Trap1aP19473 224 aa17,17■□□□□ 0,34
Gm28209-201ENSMUST00000187956 Dnajc5bQ9CQ94 199 aa17,14■□□□□ 0,33
Gm28209-201ENSMUST00000187956 Akt1s1Q9D1F4 257 aa16,93■□□□□ 0,3
Gm28209-201ENSMUST00000187956 Rimbp2Q80U40 1072 aa16,63■□□□□ 0,25
Gm28209-201ENSMUST00000187956 Znf704Q9ERQ3 566 aa16,63■□□□□ 0,25
Gm28209-201ENSMUST00000187956 Rsph4aQ8BYM7 716 aa16,62■□□□□ 0,25
Gm28209-201ENSMUST00000187956 Slc4a5E9Q3M5 1116 aa16,6■□□□□ 0,25
Gm28209-201ENSMUST00000187956 Kcna4Q61423 654 aa16,59■□□□□ 0,25
Gm28209-201ENSMUST00000187956 Chrna2Q91X60 512 aa16,59■□□□□ 0,25
Gm28209-201ENSMUST00000187956 Cacnb1Q8R3Z5 597 aa16,48■□□□□ 0,23
Gm28209-201ENSMUST00000187956 Ildr2B5TVM2 661 aa15,84■□□□□ 0,13
Gm28209-201ENSMUST00000187956 Znf703P0CL69 594 aa15,8■□□□□ 0,12
Gm28209-201ENSMUST00000187956 Prr29B1ARI9 187 aa15,13■□□□□ 0,01
Gm28209-201ENSMUST00000187956 Sox12Q04890 314 aa15,01□□□□□ -0,01
Gm28209-201ENSMUST00000187956 Kcnn1Q9EQR3 537 aa14,99□□□□□ -0,01
Gm28209-201ENSMUST00000187956 Bach1P97302 739 aa14,9□□□□□ -0,02
Gm28209-201ENSMUST00000187956 Atf5O70191 283 aa14,87□□□□□ -0,03
Gm28209-201ENSMUST00000187956 Egfem1Q8C088 590 aa14,83□□□□□ -0,04
Gm28209-201ENSMUST00000187956 Grwd1Q810D6 446 aaKnown RBP14,81□□□□□ -0,04
Gm28209-201ENSMUST00000187956 Zbtb7aO88939 569 aaKnown RBP14,72□□□□□ -0,05
Gm28209-201ENSMUST00000187956 Dmrt2Q8BG36 561 aa14,66□□□□□ -0,06
Gm28209-201ENSMUST00000187956 Evx2P49749 475 aa14,61□□□□□ -0,07
Gm28209-201ENSMUST00000187956 Pip4p2Q9CZX7 257 aa14,6□□□□□ -0,07
Gm28209-201ENSMUST00000187956 Hs6st3Q9QYK4 470 aa14,49□□□□□ -0,09
Gm28209-201ENSMUST00000187956 Abcb7Q61102 752 aaKnown RBP14,46□□□□□ -0,09
Gm28209-201ENSMUST00000187956 Ppp4r2Q0VGB7 417 aa14,32□□□□□ -0,12
Gm28209-201ENSMUST00000187956 Krtap4-1Q3UUY3 169 aa14,25□□□□□ -0,13
Gm28209-201ENSMUST00000187956 Kank3Q9Z1P7 791 aa14,23□□□□□ -0,13
Gm28209-201ENSMUST00000187956 Clcn6O35454 870 aa14,22□□□□□ -0,13
Gm28209-201ENSMUST00000187956 Gm35339A0A140LHH9 1649 aa14,08□□□□□ -0,15
Gm28209-201ENSMUST00000187956 Ppargc1bQ8VHJ7 1014 aa14,05□□□□□ -0,16
Gm28209-201ENSMUST00000187956 Foxp4Q9DBY0 795 aaKnown RBP14,05□□□□□ -0,16
Gm28209-201ENSMUST00000187956 Rnf216P58283 853 aa14,04□□□□□ -0,16
Gm28209-201ENSMUST00000187956 WdpcpQ8C456 722 aa14,03□□□□□ -0,16
Gm28209-201ENSMUST00000187956 ArntlQ9WTL8 632 aa14,01□□□□□ -0,17
Gm28209-201ENSMUST00000187956 Nkx1-1G3UXB3 402 aa14□□□□□ -0,17
Gm28209-201ENSMUST00000187956 Ifnlr1Q8CGK5 535 aa13,97□□□□□ -0,17
Gm28209-201ENSMUST00000187956 G430095P16RikE9Q913 147 aa13,88□□□□□ -0,19
Gm28209-201ENSMUST00000187956 Abcc9P70170 1546 aa13,86□□□□□ -0,19
Gm28209-201ENSMUST00000187956 NischQ80TM9 1593 aa13,81□□□□□ -0,2
Gm28209-201ENSMUST00000187956 Pitpnm1O35954 1243 aa13,8□□□□□ -0,2
Gm28209-201ENSMUST00000187956 Lhx8O35652 367 aa13,77□□□□□ -0,21
Gm28209-201ENSMUST00000187956 Trim35Q8C006 501 aa13,73□□□□□ -0,21
Gm28209-201ENSMUST00000187956 Gtpbp6Q3U6U5 514 aa13,69□□□□□ -0,22
Gm28209-201ENSMUST00000187956 Zbtb12Q9Z150 459 aa13,55□□□□□ -0,24
Gm28209-201ENSMUST00000187956 Cdca7Q9D0M2 382 aa13,5□□□□□ -0,25
Gm28209-201ENSMUST00000187956 Abcc8B2RUS7 1588 aa13,49□□□□□ -0,25
Gm28209-201ENSMUST00000187956 Fxr2Q9WVR4 673 aaKnown RBP13,45□□□□□ -0,26
Gm28209-201ENSMUST00000187956 Gm11555B1AQ89 175 aa13,31□□□□□ -0,28
Gm28209-201ENSMUST00000187956 ScribQ80U72 1612 aa13,21□□□□□ -0,29
Gm28209-201ENSMUST00000187956 Gm11563B1AQ90 168 aa13,19□□□□□ -0,3
Gm28209-201ENSMUST00000187956 Krtap4-7Q9D732 168 aa13,19□□□□□ -0,3
Gm28209-201ENSMUST00000187956 1700123L14RikQ3V2K7 440 aa13,15□□□□□ -0,3
Gm28209-201ENSMUST00000187956 Kiaa1522A2A7S8 1013 aa13,1□□□□□ -0,31
Gm28209-201ENSMUST00000187956 Ehmt2Q9Z148 1263 aaKnown RBP13,05□□□□□ -0,32
Gm28209-201ENSMUST00000187956 Rnf225Q9D7D1 332 aa12,96□□□□□ -0,33
Gm28209-201ENSMUST00000187956 NacadQ5SWP3 1504 aa12,92□□□□□ -0,34
Gm28209-201ENSMUST00000187956 Ms4a5Q810P8 197 aa12,89□□□□□ -0,35
Gm28209-201ENSMUST00000187956 Dok7Q18PE0 504 aa12,87□□□□□ -0,35
Gm28209-201ENSMUST00000187956 Dcbld2Q91ZV3 769 aa12,86□□□□□ -0,35
Gm28209-201ENSMUST00000187956 C1qtnf12Q8R2Z0 308 aa12,82□□□□□ -0,36
Gm28209-201ENSMUST00000187956 Slc4a1apE9PX68 744 aa12,77□□□□□ -0,37
Gm28209-201ENSMUST00000187956 Kdm5dQ62240 1548 aa12,75□□□□□ -0,37
Gm28209-201ENSMUST00000187956 Pelp1Q9DBD5 1123 aaKnown RBP12,7□□□□□ -0,38
Gm28209-201ENSMUST00000187956 Map3k10Q66L42 940 aa12,69□□□□□ -0,38
Gm28209-201ENSMUST00000187956 Gjc2Q8BQU6 440 aa12,68□□□□□ -0,38
Gm28209-201ENSMUST00000187956 Sycp2Q9CUU3 1500 aa12,65□□□□□ -0,38
Gm28209-201ENSMUST00000187956 Pcdh10E9PXQ7 1057 aa12,58□□□□□ -0,4
Gm28209-201ENSMUST00000187956 Nyap1Q6PFX7 833 aa12,56□□□□□ -0,4
Gm28209-201ENSMUST00000187956 Cadps2Q8BYR5 1297 aa12,52□□□□□ -0,41
Gm28209-201ENSMUST00000187956 Dnajc5P60904 198 aa12,46□□□□□ -0,41
Gm28209-201ENSMUST00000187956 BicraF8VPZ9 1578 aa12,46□□□□□ -0,42
Gm28209-201ENSMUST00000187956 SnphQ80U23 495 aa12,45□□□□□ -0,42
Gm28209-201ENSMUST00000187956 Pds5bQ4VA53 1446 aaKnown RBP12,45□□□□□ -0,42
Gm28209-201ENSMUST00000187956 A0A1Y7VJH8 109 aa12,43□□□□□ -0,42
Gm28209-201ENSMUST00000187956 Fbln2P37889 1221 aa12,4□□□□□ -0,42
Gm28209-201ENSMUST00000187956 Zranb1Q7M760 708 aa12,4□□□□□ -0,42
Gm28209-201ENSMUST00000187956 Thoc2B1AZI6 1594 aaKnown RBP12,36□□□□□ -0,43
Gm28209-201ENSMUST00000187956 St18Q80TY4 1045 aa12,31□□□□□ -0,44
Gm28209-201ENSMUST00000187956 Dcaf1Q80TR8 1506 aa12,31□□□□□ -0,44
Gm28209-201ENSMUST00000187956 Lce6aD3YV94 81 aa12,27□□□□□ -0,45
Gm28209-201ENSMUST00000187956 Hmx1O70218 332 aa12,26□□□□□ -0,45
Gm28209-201ENSMUST00000187956 TMEM121BQ99MX7 572 aa12,25□□□□□ -0,45
Gm28209-201ENSMUST00000187956 Npm3Q9CPP0 175 aaKnown RBP12,2□□□□□ -0,46
Gm28209-201ENSMUST00000187956 Atad2bE9Q166 1460 aaKnown RBP12,17□□□□□ -0,46
Gm28209-201ENSMUST00000187956 Cc2d2aQ8CFW7 1633 aa12,16□□□□□ -0,46
Gm28209-201ENSMUST00000187956 Znf710Q3U288 666 aa12,16□□□□□ -0,46
Gm28209-201ENSMUST00000187956 Ercc6F8VPZ5 1481 aa12,15□□□□□ -0,46
Retrieved 100 of 22,080 RNA–protein pairs in 20,8 ms