RNA–Protein interactions for RNA: ENSMUST00000146682.7

Pcdh15-221, Transcript of Protocadherin-15, mousemouse

TSL 1 (best) BASIC

Gene Pcdh15, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15-221ENSMUST00000146682 Gm35339A0A140LHH9 1649 aa21.56■■□□□ 1.04
Pcdh15-221ENSMUST00000146682 NischQ80TM9 1593 aa21.36■■□□□ 1.01
Pcdh15-221ENSMUST00000146682 Abcc8B2RUS7 1588 aa20.63■□□□□ 0.89
Pcdh15-221ENSMUST00000146682 Abcc9P70170 1546 aa20.63■□□□□ 0.89
Pcdh15-221ENSMUST00000146682 ScribQ80U72 1612 aa19.96■□□□□ 0.79
Pcdh15-221ENSMUST00000146682 Kdm5dQ62240 1548 aa19.29■□□□□ 0.68
Pcdh15-221ENSMUST00000146682 NacadQ5SWP3 1504 aa19.27■□□□□ 0.67
Pcdh15-221ENSMUST00000146682 Sycp2Q9CUU3 1500 aa18.9■□□□□ 0.62
Pcdh15-221ENSMUST00000146682 Dcaf1Q80TR8 1506 aa18.88■□□□□ 0.61
Pcdh15-221ENSMUST00000146682 Rhox8Q6VSS7 320 aa18.73■□□□□ 0.59
Pcdh15-221ENSMUST00000146682 BicraF8VPZ9 1578 aa18.68■□□□□ 0.58
Pcdh15-221ENSMUST00000146682 Rb1cc1Q9ESK9 1588 aa18.63■□□□□ 0.57
Pcdh15-221ENSMUST00000146682 Rtl1Q7M732 1744 aa18.62■□□□□ 0.57
Pcdh15-221ENSMUST00000146682 Dnajc5bQ9CQ94 199 aa18.35■□□□□ 0.53
Pcdh15-221ENSMUST00000146682 Baz1aO88379 1555 aa18.32■□□□□ 0.52
Pcdh15-221ENSMUST00000146682 Ccdc180J3QNE4 1664 aa18.19■□□□□ 0.5
Pcdh15-221ENSMUST00000146682 Zcchc6Q5BLK4 1491 aaKnown RBP18.17■□□□□ 0.5
Pcdh15-221ENSMUST00000146682 Crybg2B7ZCC2 1516 aa18.15■□□□□ 0.5
Pcdh15-221ENSMUST00000146682 Pds5bQ4VA53 1446 aaKnown RBP18.12■□□□□ 0.49
Pcdh15-221ENSMUST00000146682 Thoc2B1AZI6 1594 aaKnown RBP18■□□□□ 0.47
Pcdh15-221ENSMUST00000146682 Ube2uB1AUC4 352 aa17.99■□□□□ 0.47
Pcdh15-221ENSMUST00000146682 Atad2bE9Q166 1460 aaKnown RBP17.95■□□□□ 0.46
Pcdh15-221ENSMUST00000146682 Cecr2E9Q2Z1 1453 aa17.82■□□□□ 0.44
Pcdh15-221ENSMUST00000146682 Smarca4Q3TKT4 1613 aaKnown RBP17.81■□□□□ 0.44
Pcdh15-221ENSMUST00000146682 Ercc6F8VPZ5 1481 aa17.79■□□□□ 0.44
Pcdh15-221ENSMUST00000146682 Smarca2Q6DIC0 1577 aa17.78■□□□□ 0.44
Pcdh15-221ENSMUST00000146682 Cc2d2aQ8CFW7 1633 aa17.77■□□□□ 0.44
Pcdh15-221ENSMUST00000146682 Iqgap2Q3UQ44 1575 aa17.74■□□□□ 0.43
Pcdh15-221ENSMUST00000146682 Wdr62Q3U3T8 1523 aa17.57■□□□□ 0.4
Pcdh15-221ENSMUST00000146682 Frmpd1A2AKB4 1549 aa17.57■□□□□ 0.4
Pcdh15-221ENSMUST00000146682 Fam135aQ6NS59 1506 aa17.56■□□□□ 0.4
Pcdh15-221ENSMUST00000146682 Phldb1Q6PDH0 1371 aaKnown RBP17.45■□□□□ 0.38
Pcdh15-221ENSMUST00000146682 Ccdc136Q3TVA9 1136 aa17.41■□□□□ 0.38
Pcdh15-221ENSMUST00000146682 Ubl4bQ9CQ84 188 aa17.39■□□□□ 0.37
Pcdh15-221ENSMUST00000146682 Unc13aQ4KUS2 1712 aa17.37■□□□□ 0.37
Pcdh15-221ENSMUST00000146682 CftrP26361 1476 aa17.35■□□□□ 0.37
Pcdh15-221ENSMUST00000146682 Synj1Q8CHC4 1574 aa17.35■□□□□ 0.37
Pcdh15-221ENSMUST00000146682 Cttnbp2B9EJA2 1648 aa17.32■□□□□ 0.36
Pcdh15-221ENSMUST00000146682 Brd4Q9ESU6 1400 aaKnown RBP17.28■□□□□ 0.36
Pcdh15-221ENSMUST00000146682 Baz1bQ9Z277 1479 aa17.2■□□□□ 0.34
Pcdh15-221ENSMUST00000146682 Mrc2Q64449 1479 aa17.2■□□□□ 0.34
Pcdh15-221ENSMUST00000146682 HrcG5E8J6 738 aa17.18■□□□□ 0.34
Pcdh15-221ENSMUST00000146682 Esf1Q3V1V3 845 aaKnown RBP17.17■□□□□ 0.34
Pcdh15-221ENSMUST00000146682 Trim41Q5NCC3 630 aa17.15■□□□□ 0.34
Pcdh15-221ENSMUST00000146682 Kif15Q6P9L6 1387 aa16.97■□□□□ 0.31
Pcdh15-221ENSMUST00000146682 Cux2P70298 1426 aa16.96■□□□□ 0.31
Pcdh15-221ENSMUST00000146682 Rsf1E9PWW9 1441 aaKnown RBP16.96■□□□□ 0.31
Pcdh15-221ENSMUST00000146682 Lrriq1Q0P5X1 1673 aa16.86■□□□□ 0.29
Pcdh15-221ENSMUST00000146682 Kif21aQ9QXL2 1672 aa16.85■□□□□ 0.29
Pcdh15-221ENSMUST00000146682 Cep164Q5DU05 1446 aa16.85■□□□□ 0.29
Pcdh15-221ENSMUST00000146682 Golga3P55937 1487 aa16.85■□□□□ 0.29
Pcdh15-221ENSMUST00000146682 Lamc3Q9R0B6 1581 aa16.82■□□□□ 0.28
Pcdh15-221ENSMUST00000146682 Npm1Q61937 292 aaKnown RBP16.8■□□□□ 0.28
Pcdh15-221ENSMUST00000146682 Cngb1E1AZ71 1325 aa16.76■□□□□ 0.27
Pcdh15-221ENSMUST00000146682 Top2bQ64511 1612 aa16.76■□□□□ 0.27
Pcdh15-221ENSMUST00000146682 Il27Q8K3I6 234 aa16.75■□□□□ 0.27
Pcdh15-221ENSMUST00000146682 DiexfQ8BTT6 772 aaKnown RBP16.69■□□□□ 0.26
Pcdh15-221ENSMUST00000146682 Ccdc88bQ4QRL3 1481 aa16.62■□□□□ 0.25
Pcdh15-221ENSMUST00000146682 Ccdc18Q640L5 1455 aa16.62■□□□□ 0.25
Pcdh15-221ENSMUST00000146682 TnnQ80Z71 1560 aa16.61■□□□□ 0.25
Pcdh15-221ENSMUST00000146682 Dhx29Q6PGC1 1365 aaKnown RBP16.6■□□□□ 0.25
Pcdh15-221ENSMUST00000146682 Eif4g3Q80XI3 1579 aaKnown RBP16.57■□□□□ 0.24
Pcdh15-221ENSMUST00000146682 Urb2E9Q7L1 1524 aaKnown RBP16.57■□□□□ 0.24
Pcdh15-221ENSMUST00000146682 Camsap1A2AHC3 1581 aa16.56■□□□□ 0.24
Pcdh15-221ENSMUST00000146682 Plb1Q3TTY0 1478 aa16.55■□□□□ 0.24
Pcdh15-221ENSMUST00000146682 Dnajc5P60904 198 aa16.54■□□□□ 0.24
Pcdh15-221ENSMUST00000146682 Chic1Q8CBW7 227 aa16.54■□□□□ 0.24
Pcdh15-221ENSMUST00000146682 LrpprcQ6PB66 1392 aaKnown RBP16.54■□□□□ 0.24
Pcdh15-221ENSMUST00000146682 Crocc2F6XLV1 1638 aa16.51■□□□□ 0.23
Pcdh15-221ENSMUST00000146682 Fmn1Q05860 1466 aa16.49■□□□□ 0.23
Pcdh15-221ENSMUST00000146682 PogzQ8BZH4 1409 aaKnown RBP16.42■□□□□ 0.22
Pcdh15-221ENSMUST00000146682 Rpgrip1Q9EPQ2 1331 aa16.41■□□□□ 0.22
Pcdh15-221ENSMUST00000146682 Top2aQ01320 1528 aaKnown RBP16.38■□□□□ 0.21
Pcdh15-221ENSMUST00000146682 Duox2A2AQ99 1517 aa16.37■□□□□ 0.21
Pcdh15-221ENSMUST00000146682 Shroom2A2ALU4 1481 aa16.35■□□□□ 0.21
Pcdh15-221ENSMUST00000146682 Ift140E9PY46 1464 aa16.34■□□□□ 0.21
Pcdh15-221ENSMUST00000146682 Grin2bQ01097 1482 aa16.32■□□□□ 0.2
Pcdh15-221ENSMUST00000146682 Rusc2Q80U22 1514 aa16.31■□□□□ 0.2
Pcdh15-221ENSMUST00000146682 Acin1Q9JIX8 1338 aaKnown RBP16.29■□□□□ 0.2
Pcdh15-221ENSMUST00000146682 Pelp1Q9DBD5 1123 aaKnown RBP16.29■□□□□ 0.2
Pcdh15-221ENSMUST00000146682 Pabpn1Q8CCS6 302 aaKnown RBP16.27■□□□□ 0.2
Pcdh15-221ENSMUST00000146682 Samd9lQ69Z37 1561 aa16.27■□□□□ 0.19
Pcdh15-221ENSMUST00000146682 Gab3Q8BSM5 595 aa16.27■□□□□ 0.19
Pcdh15-221ENSMUST00000146682 Disp1Q3TDN0 1521 aa16.25■□□□□ 0.19
Pcdh15-221ENSMUST00000146682 CatipB9EKE5 520 aa16.25■□□□□ 0.19
Pcdh15-221ENSMUST00000146682 Ehmt2Q9Z148 1263 aaKnown RBP16.25■□□□□ 0.19
Pcdh15-221ENSMUST00000146682 Rapgef2Q8CHG7 1496 aa16.24■□□□□ 0.19
Pcdh15-221ENSMUST00000146682 Setd1bQ8CFT2 1985 aa16.23■□□□□ 0.19
Pcdh15-221ENSMUST00000146682 Rad54l2Q99NG0 1466 aa16.19■□□□□ 0.18
Pcdh15-221ENSMUST00000146682 Efcab5A0JP43 1406 aa16.18■□□□□ 0.18
Pcdh15-221ENSMUST00000146682 Col17a1Q07563 1470 aa16.18■□□□□ 0.18
Pcdh15-221ENSMUST00000146682 Nup160Q9Z0W3 1402 aaKnown RBP16.15■□□□□ 0.18
Pcdh15-221ENSMUST00000146682 Pbrm1Q8BSQ9 1634 aaKnown RBP16.13■□□□□ 0.17
Pcdh15-221ENSMUST00000146682 Cc2d2bA0A286YDU8 1405 aa16.12■□□□□ 0.17
Pcdh15-221ENSMUST00000146682 PtprkP35822 1457 aa16.11■□□□□ 0.17
Pcdh15-221ENSMUST00000146682 Grin2aP35436 1464 aa16.1■□□□□ 0.17
Pcdh15-221ENSMUST00000146682 Eif4g1Q6NZJ6 1600 aaKnown RBP16.09■□□□□ 0.17
Pcdh15-221ENSMUST00000146682 Magi3Q9EQJ9 1476 aa16.09■□□□□ 0.17
Pcdh15-221ENSMUST00000146682 NrkQ9R0G8 1455 aa16.09■□□□□ 0.17
Pcdh15-221ENSMUST00000146682 Ttbk1Q6PCN3 1308 aa16.08■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms