RNA–Protein interactions for RNA: ENSMUST00000125517.8

Pcdh15-210, Transcript of Protocadherin-15, mousemouse

TSL 1 (best) BASIC

Gene Pcdh15, Length 3,074 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15-210ENSMUST00000125517 NischQ80TM9 1593 aa18.16■□□□□ 0.5
Pcdh15-210ENSMUST00000125517 Gm35339A0A140LHH9 1649 aa17.56■□□□□ 0.4
Pcdh15-210ENSMUST00000125517 Abcc9P70170 1546 aa17.46■□□□□ 0.39
Pcdh15-210ENSMUST00000125517 Abcc8B2RUS7 1588 aa17.24■□□□□ 0.35
Pcdh15-210ENSMUST00000125517 Rhox8Q6VSS7 320 aa17.18■□□□□ 0.34
Pcdh15-210ENSMUST00000125517 ScribQ80U72 1612 aa16.2■□□□□ 0.18
Pcdh15-210ENSMUST00000125517 Ccdc136Q3TVA9 1136 aa15.96■□□□□ 0.15
Pcdh15-210ENSMUST00000125517 Kdm5dQ62240 1548 aa15.94■□□□□ 0.14
Pcdh15-210ENSMUST00000125517 Rb1cc1Q9ESK9 1588 aa15.88■□□□□ 0.13
Pcdh15-210ENSMUST00000125517 NacadQ5SWP3 1504 aa15.84■□□□□ 0.13
Pcdh15-210ENSMUST00000125517 Dcaf1Q80TR8 1506 aa15.8■□□□□ 0.12
Pcdh15-210ENSMUST00000125517 Zcchc6Q5BLK4 1491 aaKnown RBP15.72■□□□□ 0.11
Pcdh15-210ENSMUST00000125517 Baz1aO88379 1555 aa15.6■□□□□ 0.09
Pcdh15-210ENSMUST00000125517 Rtl1Q7M732 1744 aa15.6■□□□□ 0.09
Pcdh15-210ENSMUST00000125517 Sycp2Q9CUU3 1500 aa15.48■□□□□ 0.07
Pcdh15-210ENSMUST00000125517 Ccdc180J3QNE4 1664 aa15.44■□□□□ 0.06
Pcdh15-210ENSMUST00000125517 Trim41Q5NCC3 630 aa15.37■□□□□ 0.05
Pcdh15-210ENSMUST00000125517 Cngb1E1AZ71 1325 aa15.29■□□□□ 0.04
Pcdh15-210ENSMUST00000125517 Esf1Q3V1V3 845 aaKnown RBP15.25■□□□□ 0.03
Pcdh15-210ENSMUST00000125517 Crybg2B7ZCC2 1516 aa15.21■□□□□ 0.03
Pcdh15-210ENSMUST00000125517 Smarca2Q6DIC0 1577 aa15.17■□□□□ 0.02
Pcdh15-210ENSMUST00000125517 Cecr2E9Q2Z1 1453 aa15.16■□□□□ 0.02
Pcdh15-210ENSMUST00000125517 BicraF8VPZ9 1578 aa15.15■□□□□ 0.02
Pcdh15-210ENSMUST00000125517 Ehmt2Q9Z148 1263 aaKnown RBP15.03■□□□□ -0
Pcdh15-210ENSMUST00000125517 HrcG5E8J6 738 aa15.01□□□□□ -0.01
Pcdh15-210ENSMUST00000125517 Brd4Q9ESU6 1400 aaKnown RBP15.01□□□□□ -0.01
Pcdh15-210ENSMUST00000125517 Gab3Q8BSM5 595 aa15.01□□□□□ -0.01
Pcdh15-210ENSMUST00000125517 Chic1Q8CBW7 227 aa14.91□□□□□ -0.02
Pcdh15-210ENSMUST00000125517 Synj1Q8CHC4 1574 aa14.86□□□□□ -0.03
Pcdh15-210ENSMUST00000125517 CftrP26361 1476 aa14.82□□□□□ -0.04
Pcdh15-210ENSMUST00000125517 Smarca4Q3TKT4 1613 aaKnown RBP14.75□□□□□ -0.05
Pcdh15-210ENSMUST00000125517 Golga3P55937 1487 aa14.73□□□□□ -0.05
Pcdh15-210ENSMUST00000125517 Rsf1E9PWW9 1441 aaKnown RBP14.71□□□□□ -0.05
Pcdh15-210ENSMUST00000125517 Il27Q8K3I6 234 aa14.69□□□□□ -0.06
Pcdh15-210ENSMUST00000125517 Pds5bQ4VA53 1446 aaKnown RBP14.69□□□□□ -0.06
Pcdh15-210ENSMUST00000125517 Ccdc88bQ4QRL3 1481 aa14.68□□□□□ -0.06
Pcdh15-210ENSMUST00000125517 Atad2bE9Q166 1460 aaKnown RBP14.66□□□□□ -0.06
Pcdh15-210ENSMUST00000125517 Cep164Q5DU05 1446 aa14.64□□□□□ -0.07
Pcdh15-210ENSMUST00000125517 Iqgap2Q3UQ44 1575 aa14.63□□□□□ -0.07
Pcdh15-210ENSMUST00000125517 Cttnbp2B9EJA2 1648 aa14.6□□□□□ -0.07
Pcdh15-210ENSMUST00000125517 Myt1lP97500 1187 aa14.57□□□□□ -0.08
Pcdh15-210ENSMUST00000125517 Npm2Q80W85 207 aa14.56□□□□□ -0.08
Pcdh15-210ENSMUST00000125517 Ercc6F8VPZ5 1481 aa14.49□□□□□ -0.09
Pcdh15-210ENSMUST00000125517 Ubl4bQ9CQ84 188 aa14.46□□□□□ -0.09
Pcdh15-210ENSMUST00000125517 Frmpd1A2AKB4 1549 aa14.43□□□□□ -0.1
Pcdh15-210ENSMUST00000125517 Kif15Q6P9L6 1387 aa14.43□□□□□ -0.1
Pcdh15-210ENSMUST00000125517 Zeb1Q64318 1117 aa14.41□□□□□ -0.1
Pcdh15-210ENSMUST00000125517 Cc2d2aQ8CFW7 1633 aa14.4□□□□□ -0.1
Pcdh15-210ENSMUST00000125517 Dnajc5bQ9CQ94 199 aa14.35□□□□□ -0.11
Pcdh15-210ENSMUST00000125517 Top2bQ64511 1612 aa14.35□□□□□ -0.11
Pcdh15-210ENSMUST00000125517 Fmn1Q05860 1466 aa14.35□□□□□ -0.11
Pcdh15-210ENSMUST00000125517 Wdr62Q3U3T8 1523 aa14.33□□□□□ -0.11
Pcdh15-210ENSMUST00000125517 Npm1Q61937 292 aaKnown RBP14.32□□□□□ -0.12
Pcdh15-210ENSMUST00000125517 Phldb1Q6PDH0 1371 aaKnown RBP14.26□□□□□ -0.13
Pcdh15-210ENSMUST00000125517 Acin1Q9JIX8 1338 aaKnown RBP14.22□□□□□ -0.13
Pcdh15-210ENSMUST00000125517 Ap3b1Q9Z1T1 1105 aa14.21□□□□□ -0.13
Pcdh15-210ENSMUST00000125517 UbtfP25976 765 aaKnown RBP14.2□□□□□ -0.14
Pcdh15-210ENSMUST00000125517 Cux2P70298 1426 aa14.19□□□□□ -0.14
Pcdh15-210ENSMUST00000125517 Rapgef2Q8CHG7 1496 aa14.16□□□□□ -0.14
Pcdh15-210ENSMUST00000125517 Top2aQ01320 1528 aaKnown RBP14.14□□□□□ -0.15
Pcdh15-210ENSMUST00000125517 Ccdc18Q640L5 1455 aa14.12□□□□□ -0.15
Pcdh15-210ENSMUST00000125517 Cep162Q6ZQ06 1403 aa14.11□□□□□ -0.15
Pcdh15-210ENSMUST00000125517 Thoc2B1AZI6 1594 aaKnown RBP14.1□□□□□ -0.15
Pcdh15-210ENSMUST00000125517 Plekhg3Q4VAC9 1341 aa14.1□□□□□ -0.15
Pcdh15-210ENSMUST00000125517 PtprkP35822 1457 aa14.07□□□□□ -0.16
Pcdh15-210ENSMUST00000125517 Rpgrip1Q9EPQ2 1331 aa14.07□□□□□ -0.16
Pcdh15-210ENSMUST00000125517 Lamc3Q9R0B6 1581 aa14.05□□□□□ -0.16
Pcdh15-210ENSMUST00000125517 Clip1Q922J3 1391 aa14.02□□□□□ -0.17
Pcdh15-210ENSMUST00000125517 Unc13aQ4KUS2 1712 aa14.01□□□□□ -0.17
Pcdh15-210ENSMUST00000125517 TnnQ80Z71 1560 aa13.99□□□□□ -0.17
Pcdh15-210ENSMUST00000125517 Mier1Q5UAK0 511 aa13.99□□□□□ -0.17
Pcdh15-210ENSMUST00000125517 Camsap1A2AHC3 1581 aa13.98□□□□□ -0.17
Pcdh15-210ENSMUST00000125517 LrpprcQ6PB66 1392 aaKnown RBP13.97□□□□□ -0.17
Pcdh15-210ENSMUST00000125517 Lmod2Q3UHZ5 550 aa13.94□□□□□ -0.18
Pcdh15-210ENSMUST00000125517 Fam135aQ6NS59 1506 aa13.93□□□□□ -0.18
Pcdh15-210ENSMUST00000125517 Dhx29Q6PGC1 1365 aaKnown RBP13.93□□□□□ -0.18
Pcdh15-210ENSMUST00000125517 Grin2bQ01097 1482 aa13.92□□□□□ -0.18
Pcdh15-210ENSMUST00000125517 Baz1bQ9Z277 1479 aa13.92□□□□□ -0.18
Pcdh15-210ENSMUST00000125517 Arhgap35Q91YM2 1499 aa13.9□□□□□ -0.18
Pcdh15-210ENSMUST00000125517 Shroom4Q1W617 1475 aa13.9□□□□□ -0.18
Pcdh15-210ENSMUST00000125517 Setd5Q5XJV7 1441 aa13.89□□□□□ -0.19
Pcdh15-210ENSMUST00000125517 Duox2A2AQ99 1517 aa13.86□□□□□ -0.19
Pcdh15-210ENSMUST00000125517 Mrc2Q64449 1479 aa13.85□□□□□ -0.19
Pcdh15-210ENSMUST00000125517 NrkQ9R0G8 1455 aa13.85□□□□□ -0.19
Pcdh15-210ENSMUST00000125517 PogzQ8BZH4 1409 aaKnown RBP13.84□□□□□ -0.19
Pcdh15-210ENSMUST00000125517 Rad54l2Q99NG0 1466 aa13.82□□□□□ -0.2
Pcdh15-210ENSMUST00000125517 Eea1Q8BL66 1411 aa13.82□□□□□ -0.2
Pcdh15-210ENSMUST00000125517 Efcab5A0JP43 1406 aa13.79□□□□□ -0.2
Pcdh15-210ENSMUST00000125517 Mroh2bQ7M6Y6 1581 aa13.76□□□□□ -0.21
Pcdh15-210ENSMUST00000125517 BlmO88700 1416 aa13.75□□□□□ -0.21
Pcdh15-210ENSMUST00000125517 Fam50aQ9WV03 339 aaKnown RBP13.73□□□□□ -0.21
Pcdh15-210ENSMUST00000125517 Plb1Q3TTY0 1478 aa13.73□□□□□ -0.21
Pcdh15-210ENSMUST00000125517 Carmil1Q6EDY6 1374 aa13.7□□□□□ -0.22
Pcdh15-210ENSMUST00000125517 Arap1Q4LDD4 1452 aa13.69□□□□□ -0.22
Pcdh15-210ENSMUST00000125517 Urb2E9Q7L1 1524 aaKnown RBP13.69□□□□□ -0.22
Pcdh15-210ENSMUST00000125517 Kif21aQ9QXL2 1672 aa13.69□□□□□ -0.22
Pcdh15-210ENSMUST00000125517 NefmP08553 848 aa13.68□□□□□ -0.22
Pcdh15-210ENSMUST00000125517 Samd9lQ69Z37 1561 aa13.67□□□□□ -0.22
Pcdh15-210ENSMUST00000125517 Fkbp15Q6P9Q6 1216 aaKnown RBP13.67□□□□□ -0.22
Pcdh15-210ENSMUST00000125517 Arhgap27A2AB59 869 aa13.66□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms