RNA–Protein interactions for RNA: ENSMUST00000117363.8

Lsg1-201, Transcript of Large subunit GTPase 1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lsg1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsg1-201ENSMUST00000117363 NischQ80TM9 1593 aa23.18■■□□□ 1.3
Lsg1-201ENSMUST00000117363 Gm35339A0A140LHH9 1649 aa22.81■■□□□ 1.24
Lsg1-201ENSMUST00000117363 Abcc9P70170 1546 aa22.51■■□□□ 1.19
Lsg1-201ENSMUST00000117363 Abcc8B2RUS7 1588 aa22.01■■□□□ 1.11
Lsg1-201ENSMUST00000117363 Rhox8Q6VSS7 320 aa21.46■■□□□ 1.03
Lsg1-201ENSMUST00000117363 Rtl1Q7M732 1744 aa21.19■□□□□ 0.98
Lsg1-201ENSMUST00000117363 Ccdc180J3QNE4 1664 aa20.77■□□□□ 0.92
Lsg1-201ENSMUST00000117363 ScribQ80U72 1612 aa20.55■□□□□ 0.88
Lsg1-201ENSMUST00000117363 Dcaf1Q80TR8 1506 aa20.51■□□□□ 0.87
Lsg1-201ENSMUST00000117363 Zcchc6Q5BLK4 1491 aaKnown RBP20.4■□□□□ 0.86
Lsg1-201ENSMUST00000117363 Rb1cc1Q9ESK9 1588 aa20.33■□□□□ 0.85
Lsg1-201ENSMUST00000117363 Kdm5dQ62240 1548 aa20.16■□□□□ 0.82
Lsg1-201ENSMUST00000117363 Baz1aO88379 1555 aa20.08■□□□□ 0.8
Lsg1-201ENSMUST00000117363 NacadQ5SWP3 1504 aa19.98■□□□□ 0.79
Lsg1-201ENSMUST00000117363 Ccdc136Q3TVA9 1136 aa19.88■□□□□ 0.77
Lsg1-201ENSMUST00000117363 HrcG5E8J6 738 aa19.72■□□□□ 0.75
Lsg1-201ENSMUST00000117363 Crybg2B7ZCC2 1516 aa19.65■□□□□ 0.74
Lsg1-201ENSMUST00000117363 Smarca2Q6DIC0 1577 aa19.62■□□□□ 0.73
Lsg1-201ENSMUST00000117363 Sycp2Q9CUU3 1500 aa19.54■□□□□ 0.72
Lsg1-201ENSMUST00000117363 Rpgrip1Q9EPQ2 1331 aa19.47■□□□□ 0.71
Lsg1-201ENSMUST00000117363 Trim41Q5NCC3 630 aa19.45■□□□□ 0.7
Lsg1-201ENSMUST00000117363 Ehmt2Q9Z148 1263 aaKnown RBP19.28■□□□□ 0.68
Lsg1-201ENSMUST00000117363 Acin1Q9JIX8 1338 aaKnown RBP19.26■□□□□ 0.67
Lsg1-201ENSMUST00000117363 Cep164Q5DU05 1446 aa19.2■□□□□ 0.66
Lsg1-201ENSMUST00000117363 Cecr2E9Q2Z1 1453 aa19.14■□□□□ 0.65
Lsg1-201ENSMUST00000117363 Brd4Q9ESU6 1400 aaKnown RBP19.13■□□□□ 0.65
Lsg1-201ENSMUST00000117363 BicraF8VPZ9 1578 aa19.12■□□□□ 0.65
Lsg1-201ENSMUST00000117363 Cngb1E1AZ71 1325 aa19.04■□□□□ 0.64
Lsg1-201ENSMUST00000117363 Synj1Q8CHC4 1574 aa19.01■□□□□ 0.63
Lsg1-201ENSMUST00000117363 Rsf1E9PWW9 1441 aaKnown RBP18.97■□□□□ 0.63
Lsg1-201ENSMUST00000117363 Golga3P55937 1487 aa18.94■□□□□ 0.62
Lsg1-201ENSMUST00000117363 Chic1Q8CBW7 227 aa18.93■□□□□ 0.62
Lsg1-201ENSMUST00000117363 CftrP26361 1476 aa18.86■□□□□ 0.61
Lsg1-201ENSMUST00000117363 Ccdc88bQ4QRL3 1481 aa18.86■□□□□ 0.61
Lsg1-201ENSMUST00000117363 Cttnbp2B9EJA2 1648 aa18.8■□□□□ 0.6
Lsg1-201ENSMUST00000117363 Gab3Q8BSM5 595 aa18.8■□□□□ 0.6
Lsg1-201ENSMUST00000117363 Esf1Q3V1V3 845 aaKnown RBP18.76■□□□□ 0.59
Lsg1-201ENSMUST00000117363 Top2bQ64511 1612 aa18.75■□□□□ 0.59
Lsg1-201ENSMUST00000117363 Smarca4Q3TKT4 1613 aaKnown RBP18.72■□□□□ 0.59
Lsg1-201ENSMUST00000117363 Cc2d2aQ8CFW7 1633 aa18.61■□□□□ 0.57
Lsg1-201ENSMUST00000117363 Iqgap2Q3UQ44 1575 aa18.47■□□□□ 0.55
Lsg1-201ENSMUST00000117363 Fmn1Q05860 1466 aa18.45■□□□□ 0.54
Lsg1-201ENSMUST00000117363 Pcgf6Q99NA9 353 aa18.39■□□□□ 0.53
Lsg1-201ENSMUST00000117363 Top2aQ01320 1528 aaKnown RBP18.37■□□□□ 0.53
Lsg1-201ENSMUST00000117363 Rapgef2Q8CHG7 1496 aa18.35■□□□□ 0.53
Lsg1-201ENSMUST00000117363 Atad2bE9Q166 1460 aaKnown RBP18.35■□□□□ 0.53
Lsg1-201ENSMUST00000117363 Mier1Q5UAK0 511 aa18.26■□□□□ 0.51
Lsg1-201ENSMUST00000117363 Pds5bQ4VA53 1446 aaKnown RBP18.25■□□□□ 0.51
Lsg1-201ENSMUST00000117363 Cep162Q6ZQ06 1403 aa18.2■□□□□ 0.5
Lsg1-201ENSMUST00000117363 NefmP08553 848 aa18.18■□□□□ 0.5
Lsg1-201ENSMUST00000117363 Supt5hO55201 1082 aaKnown RBP18.17■□□□□ 0.5
Lsg1-201ENSMUST00000117363 TnnQ80Z71 1560 aa18.15■□□□□ 0.5
Lsg1-201ENSMUST00000117363 Myt1lP97500 1187 aa18.13■□□□□ 0.49
Lsg1-201ENSMUST00000117363 Npm2Q80W85 207 aa18.1■□□□□ 0.49
Lsg1-201ENSMUST00000117363 Frmpd1A2AKB4 1549 aa18.09■□□□□ 0.49
Lsg1-201ENSMUST00000117363 Wdr62Q3U3T8 1523 aa18.09■□□□□ 0.49
Lsg1-201ENSMUST00000117363 Eif4g1Q6NZJ6 1600 aaKnown RBP18.07■□□□□ 0.48
Lsg1-201ENSMUST00000117363 UbtfP25976 765 aaKnown RBP18.06■□□□□ 0.48
Lsg1-201ENSMUST00000117363 Zeb1Q64318 1117 aa18.06■□□□□ 0.48
Lsg1-201ENSMUST00000117363 Lamc3Q9R0B6 1581 aa17.99■□□□□ 0.47
Lsg1-201ENSMUST00000117363 Ercc6F8VPZ5 1481 aa17.97■□□□□ 0.47
Lsg1-201ENSMUST00000117363 Unc13aQ4KUS2 1712 aa17.96■□□□□ 0.47
Lsg1-201ENSMUST00000117363 Clip1Q922J3 1391 aa17.93■□□□□ 0.46
Lsg1-201ENSMUST00000117363 Kif15Q6P9L6 1387 aa17.91■□□□□ 0.46
Lsg1-201ENSMUST00000117363 Arhgap35Q91YM2 1499 aa17.9■□□□□ 0.46
Lsg1-201ENSMUST00000117363 PtprkP35822 1457 aa17.9■□□□□ 0.46
Lsg1-201ENSMUST00000117363 NrkQ9R0G8 1455 aa17.88■□□□□ 0.45
Lsg1-201ENSMUST00000117363 Il27Q8K3I6 234 aa17.87■□□□□ 0.45
Lsg1-201ENSMUST00000117363 Camsap1A2AHC3 1581 aa17.86■□□□□ 0.45
Lsg1-201ENSMUST00000117363 Plekhg3Q4VAC9 1341 aa17.84■□□□□ 0.45
Lsg1-201ENSMUST00000117363 Shroom4Q1W617 1475 aa17.82■□□□□ 0.44
Lsg1-201ENSMUST00000117363 Sall2Q9QX96 1004 aa17.77■□□□□ 0.43
Lsg1-201ENSMUST00000117363 Eea1Q8BL66 1411 aa17.74■□□□□ 0.43
Lsg1-201ENSMUST00000117363 Arap1Q4LDD4 1452 aa17.74■□□□□ 0.43
Lsg1-201ENSMUST00000117363 Ccdc18Q640L5 1455 aa17.74■□□□□ 0.43
Lsg1-201ENSMUST00000117363 Map3k1P53349 1493 aa17.74■□□□□ 0.43
Lsg1-201ENSMUST00000117363 Las1lA2BE28 776 aaKnown RBP17.73■□□□□ 0.43
Lsg1-201ENSMUST00000117363 Grin2bQ01097 1482 aa17.72■□□□□ 0.43
Lsg1-201ENSMUST00000117363 Ncapd3Q6ZQK0 1506 aa17.71■□□□□ 0.43
Lsg1-201ENSMUST00000117363 Arhgef5E9Q7D5 1581 aa17.67■□□□□ 0.42
Lsg1-201ENSMUST00000117363 Setd5Q5XJV7 1441 aa17.67■□□□□ 0.42
Lsg1-201ENSMUST00000117363 Ap3b1Q9Z1T1 1105 aa17.66■□□□□ 0.42
Lsg1-201ENSMUST00000117363 Thoc2B1AZI6 1594 aaKnown RBP17.66■□□□□ 0.42
Lsg1-201ENSMUST00000117363 Phldb1Q6PDH0 1371 aaKnown RBP17.65■□□□□ 0.42
Lsg1-201ENSMUST00000117363 Mroh2bQ7M6Y6 1581 aa17.64■□□□□ 0.41
Lsg1-201ENSMUST00000117363 Wdr66E9Q743 1299 aa17.63■□□□□ 0.41
Lsg1-201ENSMUST00000117363 Baz1bQ9Z277 1479 aa17.61■□□□□ 0.41
Lsg1-201ENSMUST00000117363 Aebp2Q9Z248 504 aaKnown RBP17.6■□□□□ 0.41
Lsg1-201ENSMUST00000117363 Cux2P70298 1426 aa17.6■□□□□ 0.41
Lsg1-201ENSMUST00000117363 Neurod1Q60867 357 aa17.59■□□□□ 0.41
Lsg1-201ENSMUST00000117363 Erich3F6QRE9 1637 aa17.59■□□□□ 0.41
Lsg1-201ENSMUST00000117363 TonslQ6NZL6 1363 aa17.58■□□□□ 0.41
Lsg1-201ENSMUST00000117363 Tiam1Q60610 1591 aa17.57■□□□□ 0.4
Lsg1-201ENSMUST00000117363 Ankrd26Q811D2 1581 aa17.57■□□□□ 0.4
Lsg1-201ENSMUST00000117363 AqrQ8CFQ3 1481 aaKnown RBP17.56■□□□□ 0.4
Lsg1-201ENSMUST00000117363 Ubl4bQ9CQ84 188 aa17.54■□□□□ 0.4
Lsg1-201ENSMUST00000117363 Npm1Q61937 292 aaKnown RBP17.52■□□□□ 0.4
Lsg1-201ENSMUST00000117363 Pcf11G3X9Z4 1553 aa17.5■□□□□ 0.39
Lsg1-201ENSMUST00000117363 ClspnQ80YR7 1315 aa17.5■□□□□ 0.39
Lsg1-201ENSMUST00000117363 Fam135aQ6NS59 1506 aa17.49■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms