RNA–Protein interactions for RNA: ENSMUST00000113870.2

Tsc1-204, Transcript of Hamartin, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Tsc1, Length 7,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tsc1-204ENSMUST00000113870 Rhox8Q6VSS7 320 aa17.15■□□□□ 0.34
Tsc1-204ENSMUST00000113870 Rpgrip1Q9EPQ2 1331 aa15.99■□□□□ 0.15
Tsc1-204ENSMUST00000113870 Cngb1E1AZ71 1325 aa15.94■□□□□ 0.14
Tsc1-204ENSMUST00000113870 Pelp1Q9DBD5 1123 aaKnown RBP15.77■□□□□ 0.12
Tsc1-204ENSMUST00000113870 Las1lA2BE28 776 aaKnown RBP15.74■□□□□ 0.11
Tsc1-204ENSMUST00000113870 Ehmt2Q9Z148 1263 aaKnown RBP15.52■□□□□ 0.08
Tsc1-204ENSMUST00000113870 Wdr66E9Q743 1299 aa15.47■□□□□ 0.07
Tsc1-204ENSMUST00000113870 Ube2uB1AUC4 352 aa15.41■□□□□ 0.06
Tsc1-204ENSMUST00000113870 Esf1Q3V1V3 845 aaKnown RBP15.27■□□□□ 0.03
Tsc1-204ENSMUST00000113870 Ccdc136Q3TVA9 1136 aa15.24■□□□□ 0.03
Tsc1-204ENSMUST00000113870 Amer1Q7TS75 1132 aa15.19■□□□□ 0.02
Tsc1-204ENSMUST00000113870 Zeb1Q64318 1117 aa15.15■□□□□ 0.02
Tsc1-204ENSMUST00000113870 Npm2Q80W85 207 aa14.99□□□□□ -0.01
Tsc1-204ENSMUST00000113870 NischQ80TM9 1593 aa14.99□□□□□ -0.01
Tsc1-204ENSMUST00000113870 Gab3Q8BSM5 595 aa14.9□□□□□ -0.02
Tsc1-204ENSMUST00000113870 CenpbP27790 599 aa14.87□□□□□ -0.03
Tsc1-204ENSMUST00000113870 4930567H17RikQ3V0K5 233 aa14.83□□□□□ -0.04
Tsc1-204ENSMUST00000113870 Stra8P70278 393 aa14.81□□□□□ -0.04
Tsc1-204ENSMUST00000113870 Myt1lP97500 1187 aa14.81□□□□□ -0.04
Tsc1-204ENSMUST00000113870 Trim41Q5NCC3 630 aa14.76□□□□□ -0.05
Tsc1-204ENSMUST00000113870 Slc24a1Q91WD8 1130 aa14.64□□□□□ -0.07
Tsc1-204ENSMUST00000113870 NefmP08553 848 aa14.54□□□□□ -0.08
Tsc1-204ENSMUST00000113870 Ttbk1Q6PCN3 1308 aa14.5□□□□□ -0.09
Tsc1-204ENSMUST00000113870 UbtfP25976 765 aaKnown RBP14.49□□□□□ -0.09
Tsc1-204ENSMUST00000113870 4933416C03RikQ3V063 378 aa14.47□□□□□ -0.09
Tsc1-204ENSMUST00000113870 Il27Q8K3I6 234 aa14.41□□□□□ -0.1
Tsc1-204ENSMUST00000113870 Abcc9P70170 1546 aa14.41□□□□□ -0.1
Tsc1-204ENSMUST00000113870 Acin1Q9JIX8 1338 aaKnown RBP14.39□□□□□ -0.11
Tsc1-204ENSMUST00000113870 Anp32bQ9EST5 272 aaKnown RBP14.38□□□□□ -0.11
Tsc1-204ENSMUST00000113870 NeflP08551 543 aa14.37□□□□□ -0.11
Tsc1-204ENSMUST00000113870 Gm35339A0A140LHH9 1649 aa14.34□□□□□ -0.11
Tsc1-204ENSMUST00000113870 NrdcQ8BHG1 1161 aa14.32□□□□□ -0.12
Tsc1-204ENSMUST00000113870 Cdk11bP24788 784 aaKnown RBP14.28□□□□□ -0.12
Tsc1-204ENSMUST00000113870 Myt1Q8CFC2 1127 aa14.28□□□□□ -0.12
Tsc1-204ENSMUST00000113870 Rtl1Q7M732 1744 aa14.24□□□□□ -0.13
Tsc1-204ENSMUST00000113870 Tnnt3Q9QZ47 272 aa14.23□□□□□ -0.13
Tsc1-204ENSMUST00000113870 Ccdc180J3QNE4 1664 aa14.23□□□□□ -0.13
Tsc1-204ENSMUST00000113870 Os9Q8K2C7 672 aa14.2□□□□□ -0.14
Tsc1-204ENSMUST00000113870 Eif5bQ05D44 1216 aaKnown RBP14.16□□□□□ -0.14
Tsc1-204ENSMUST00000113870 Zcchc6Q5BLK4 1491 aaKnown RBP14.16□□□□□ -0.14
Tsc1-204ENSMUST00000113870 Neurod1Q60867 357 aa14.14□□□□□ -0.15
Tsc1-204ENSMUST00000113870 NclP09405 707 aaKnown RBP14.13□□□□□ -0.15
Tsc1-204ENSMUST00000113870 HrcG5E8J6 738 aa14.13□□□□□ -0.15
Tsc1-204ENSMUST00000113870 Ap3b1Q9Z1T1 1105 aa14.11□□□□□ -0.15
Tsc1-204ENSMUST00000113870 Fam50aQ9WV03 339 aaKnown RBP14.09□□□□□ -0.15
Tsc1-204ENSMUST00000113870 Nop58Q6DFW4 536 aaKnown RBP14.04□□□□□ -0.16
Tsc1-204ENSMUST00000113870 Rtl5Q5DTT4 599 aa14.02□□□□□ -0.16
Tsc1-204ENSMUST00000113870 Pcgf6Q99NA9 353 aa13.89□□□□□ -0.19
Tsc1-204ENSMUST00000113870 TonslQ6NZL6 1363 aa13.85□□□□□ -0.19
Tsc1-204ENSMUST00000113870 Ppargc1bQ8VHJ7 1014 aa13.8□□□□□ -0.2
Tsc1-204ENSMUST00000113870 Ifnlr1Q8CGK5 535 aa13.79□□□□□ -0.2
Tsc1-204ENSMUST00000113870 DaxxO35613 739 aa13.77□□□□□ -0.21
Tsc1-204ENSMUST00000113870 Npm1Q61937 292 aaKnown RBP13.75□□□□□ -0.21
Tsc1-204ENSMUST00000113870 Zbtb7cQ8VCZ7 619 aa13.73□□□□□ -0.21
Tsc1-204ENSMUST00000113870 Gm13697A2AK42 830 aa13.72□□□□□ -0.21
Tsc1-204ENSMUST00000113870 Chic1Q8CBW7 227 aa13.69□□□□□ -0.22
Tsc1-204ENSMUST00000113870 Nlrp6Q91WS2 869 aa13.67□□□□□ -0.22
Tsc1-204ENSMUST00000113870 Hnrnpul2Q00PI9 745 aaKnown RBP13.65□□□□□ -0.22
Tsc1-204ENSMUST00000113870 Anp32aO35381 247 aa13.64□□□□□ -0.23
Tsc1-204ENSMUST00000113870 CatipB9EKE5 520 aa13.62□□□□□ -0.23
Tsc1-204ENSMUST00000113870 Supt5hO55201 1082 aaKnown RBP13.62□□□□□ -0.23
Tsc1-204ENSMUST00000113870 Lmod2Q3UHZ5 550 aa13.61□□□□□ -0.23
Tsc1-204ENSMUST00000113870 DiexfQ8BTT6 772 aaKnown RBP13.61□□□□□ -0.23
Tsc1-204ENSMUST00000113870 Polr3glQ8R0C0 218 aa13.6□□□□□ -0.23
Tsc1-204ENSMUST00000113870 Atp1b4Q99ME6 356 aa13.6□□□□□ -0.23
Tsc1-204ENSMUST00000113870 Abcc8B2RUS7 1588 aa13.58□□□□□ -0.24
Tsc1-204ENSMUST00000113870 Plppr3Q7TPB0 716 aa13.56□□□□□ -0.24
Tsc1-204ENSMUST00000113870 Erich6D3Z6S9 713 aa13.52□□□□□ -0.24
Tsc1-204ENSMUST00000113870 Hdac5Q9Z2V6 1113 aa13.52□□□□□ -0.24
Tsc1-204ENSMUST00000113870 ArxO35085 564 aa13.51□□□□□ -0.25
Tsc1-204ENSMUST00000113870 Fkbp15Q6P9Q6 1216 aaKnown RBP13.51□□□□□ -0.25
Tsc1-204ENSMUST00000113870 Zbtb4Q5F293 982 aa13.5□□□□□ -0.25
Tsc1-204ENSMUST00000113870 Mier1Q5UAK0 511 aa13.5□□□□□ -0.25
Tsc1-204ENSMUST00000113870 Gm13695A2AK44 830 aa13.49□□□□□ -0.25
Tsc1-204ENSMUST00000113870 Upf2A2AT37 1269 aaKnown RBP13.49□□□□□ -0.25
Tsc1-204ENSMUST00000113870 ClspnQ80YR7 1315 aa13.48□□□□□ -0.25
Tsc1-204ENSMUST00000113870 Hsp90aa1P07901 733 aaKnown RBP13.46□□□□□ -0.26
Tsc1-204ENSMUST00000113870 Prdm10Q3UTQ7 1184 aa13.45□□□□□ -0.26
Tsc1-204ENSMUST00000113870 Plekhg3Q4VAC9 1341 aa13.45□□□□□ -0.26
Tsc1-204ENSMUST00000113870 Ubl4bQ9CQ84 188 aa13.41□□□□□ -0.26
Tsc1-204ENSMUST00000113870 Lmod3E9QA62 571 aa13.33□□□□□ -0.27
Tsc1-204ENSMUST00000113870 Ythdc1E9Q5K9 736 aaKnown RBP13.33□□□□□ -0.28
Tsc1-204ENSMUST00000113870 Csrnp3P59055 597 aa13.31□□□□□ -0.28
Tsc1-204ENSMUST00000113870 Rangap1P46061 589 aaKnown RBP13.29□□□□□ -0.28
Tsc1-204ENSMUST00000113870 Brd4Q9ESU6 1400 aaKnown RBP13.28□□□□□ -0.28
Tsc1-204ENSMUST00000113870 Rb1cc1Q9ESK9 1588 aa13.28□□□□□ -0.28
Tsc1-204ENSMUST00000113870 Mapk8ip2Q9ERE9 830 aa13.27□□□□□ -0.29
Tsc1-204ENSMUST00000113870 DekQ7TNV0 380 aaKnown RBP13.25□□□□□ -0.29
Tsc1-204ENSMUST00000113870 Ppp4r2Q0VGB7 417 aa13.21□□□□□ -0.3
Tsc1-204ENSMUST00000113870 Trim44Q9QXA7 346 aa13.2□□□□□ -0.3
Tsc1-204ENSMUST00000113870 Calr4Q3TQS0 420 aa13.19□□□□□ -0.3
Tsc1-204ENSMUST00000113870 Fgd1P52734 960 aa13.18□□□□□ -0.3
Tsc1-204ENSMUST00000113870 Vsig10D3YX43 558 aa13.16□□□□□ -0.3
Tsc1-204ENSMUST00000113870 Znf326O88291 580 aa13.15□□□□□ -0.3
Tsc1-204ENSMUST00000113870 Gm38655A0A286YDK6 273 aa13.15□□□□□ -0.3
Tsc1-204ENSMUST00000113870 Rad21Q61550 635 aaKnown RBP13.14□□□□□ -0.31
Tsc1-204ENSMUST00000113870 Safb2Q80YR5 991 aaKnown RBP13.14□□□□□ -0.31
Tsc1-204ENSMUST00000113870 Eid3Q3V124 375 aa13.13□□□□□ -0.31
Tsc1-204ENSMUST00000113870 Ccer2J3QPU5 274 aa13.13□□□□□ -0.31
Tsc1-204ENSMUST00000113870 Clip1Q922J3 1391 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms