RNA–Protein interactions for RNA: ENSMUST00000111190.8

Cd44-204, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 1,412 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-204ENSMUST00000111190 Chic1Q8CBW7 227 aa16.45■□□□□ 0.22
Cd44-204ENSMUST00000111190 Mapk8ip2Q9ERE9 830 aa15.68■□□□□ 0.1
Cd44-204ENSMUST00000111190 Gm35339A0A140LHH9 1649 aa15.67■□□□□ 0.1
Cd44-204ENSMUST00000111190 NischQ80TM9 1593 aa15.63■□□□□ 0.09
Cd44-204ENSMUST00000111190 Abcc9P70170 1546 aa15.22■□□□□ 0.03
Cd44-204ENSMUST00000111190 Abcc8B2RUS7 1588 aa15.01□□□□□ -0.01
Cd44-204ENSMUST00000111190 Phf23Q8BSN5 401 aa14.89□□□□□ -0.03
Cd44-204ENSMUST00000111190 Plppr3Q7TPB0 716 aa14.6□□□□□ -0.07
Cd44-204ENSMUST00000111190 ScribQ80U72 1612 aa14.53□□□□□ -0.08
Cd44-204ENSMUST00000111190 Gab3Q8BSM5 595 aa14.31□□□□□ -0.12
Cd44-204ENSMUST00000111190 NacadQ5SWP3 1504 aa14.15□□□□□ -0.14
Cd44-204ENSMUST00000111190 Kdm5dQ62240 1548 aa14.05□□□□□ -0.16
Cd44-204ENSMUST00000111190 Rhox8Q6VSS7 320 aa13.99□□□□□ -0.17
Cd44-204ENSMUST00000111190 Dcaf1Q80TR8 1506 aa13.96□□□□□ -0.17
Cd44-204ENSMUST00000111190 Rtl1Q7M732 1744 aa13.95□□□□□ -0.18
Cd44-204ENSMUST00000111190 Sycp2Q9CUU3 1500 aa13.87□□□□□ -0.19
Cd44-204ENSMUST00000111190 Dnajc5bQ9CQ94 199 aa13.77□□□□□ -0.21
Cd44-204ENSMUST00000111190 Senp3Q9EP97 568 aaKnown RBP13.76□□□□□ -0.21
Cd44-204ENSMUST00000111190 Ccdc180J3QNE4 1664 aa13.74□□□□□ -0.21
Cd44-204ENSMUST00000111190 Rb1cc1Q9ESK9 1588 aa13.71□□□□□ -0.21
Cd44-204ENSMUST00000111190 BicraF8VPZ9 1578 aa13.68□□□□□ -0.22
Cd44-204ENSMUST00000111190 Kcna4Q61423 654 aa13.64□□□□□ -0.23
Cd44-204ENSMUST00000111190 Baz1aO88379 1555 aa13.55□□□□□ -0.24
Cd44-204ENSMUST00000111190 Pds5bQ4VA53 1446 aaKnown RBP13.44□□□□□ -0.26
Cd44-204ENSMUST00000111190 Crybg2B7ZCC2 1516 aa13.37□□□□□ -0.27
Cd44-204ENSMUST00000111190 Zcchc6Q5BLK4 1491 aaKnown RBP13.33□□□□□ -0.28
Cd44-204ENSMUST00000111190 Thoc2B1AZI6 1594 aaKnown RBP13.29□□□□□ -0.28
Cd44-204ENSMUST00000111190 Atad2bE9Q166 1460 aaKnown RBP13.24□□□□□ -0.29
Cd44-204ENSMUST00000111190 Smarca2Q6DIC0 1577 aa13.22□□□□□ -0.29
Cd44-204ENSMUST00000111190 Cc2d2aQ8CFW7 1633 aa13.11□□□□□ -0.31
Cd44-204ENSMUST00000111190 Ercc6F8VPZ5 1481 aa13.11□□□□□ -0.31
Cd44-204ENSMUST00000111190 Smarca4Q3TKT4 1613 aaKnown RBP12.99□□□□□ -0.33
Cd44-204ENSMUST00000111190 Fam135aQ6NS59 1506 aa12.96□□□□□ -0.34
Cd44-204ENSMUST00000111190 Ccdc136Q3TVA9 1136 aa12.96□□□□□ -0.34
Cd44-204ENSMUST00000111190 Iqgap2Q3UQ44 1575 aa12.95□□□□□ -0.34
Cd44-204ENSMUST00000111190 Phldb1Q6PDH0 1371 aaKnown RBP12.94□□□□□ -0.34
Cd44-204ENSMUST00000111190 Cecr2E9Q2Z1 1453 aa12.92□□□□□ -0.34
Cd44-204ENSMUST00000111190 Ubl4bQ9CQ84 188 aa12.92□□□□□ -0.34
Cd44-204ENSMUST00000111190 Frmpd1A2AKB4 1549 aa12.89□□□□□ -0.35
Cd44-204ENSMUST00000111190 Wdr62Q3U3T8 1523 aa12.87□□□□□ -0.35
Cd44-204ENSMUST00000111190 Baz1bQ9Z277 1479 aa12.85□□□□□ -0.35
Cd44-204ENSMUST00000111190 Brd4Q9ESU6 1400 aaKnown RBP12.83□□□□□ -0.36
Cd44-204ENSMUST00000111190 Trim41Q5NCC3 630 aa12.83□□□□□ -0.36
Cd44-204ENSMUST00000111190 Synj1Q8CHC4 1574 aa12.77□□□□□ -0.37
Cd44-204ENSMUST00000111190 Cttnbp2B9EJA2 1648 aa12.76□□□□□ -0.37
Cd44-204ENSMUST00000111190 HrcG5E8J6 738 aa12.73□□□□□ -0.37
Cd44-204ENSMUST00000111190 Dnajc5P60904 198 aa12.73□□□□□ -0.37
Cd44-204ENSMUST00000111190 Mrc2Q64449 1479 aa12.72□□□□□ -0.37
Cd44-204ENSMUST00000111190 CftrP26361 1476 aa12.68□□□□□ -0.38
Cd44-204ENSMUST00000111190 Golga3P55937 1487 aa12.6□□□□□ -0.39
Cd44-204ENSMUST00000111190 Unc13aQ4KUS2 1712 aa12.59□□□□□ -0.39
Cd44-204ENSMUST00000111190 Top2bQ64511 1612 aa12.58□□□□□ -0.4
Cd44-204ENSMUST00000111190 Cep164Q5DU05 1446 aa12.53□□□□□ -0.4
Cd44-204ENSMUST00000111190 Esf1Q3V1V3 845 aaKnown RBP12.51□□□□□ -0.41
Cd44-204ENSMUST00000111190 Cngb1E1AZ71 1325 aa12.48□□□□□ -0.41
Cd44-204ENSMUST00000111190 Cux2P70298 1426 aa12.45□□□□□ -0.42
Cd44-204ENSMUST00000111190 Rsf1E9PWW9 1441 aaKnown RBP12.42□□□□□ -0.42
Cd44-204ENSMUST00000111190 Kif15Q6P9L6 1387 aa12.42□□□□□ -0.42
Cd44-204ENSMUST00000111190 Npm1Q61937 292 aaKnown RBP12.41□□□□□ -0.42
Cd44-204ENSMUST00000111190 Lrriq1Q0P5X1 1673 aa12.39□□□□□ -0.43
Cd44-204ENSMUST00000111190 Ccdc88bQ4QRL3 1481 aa12.37□□□□□ -0.43
Cd44-204ENSMUST00000111190 Fmn1Q05860 1466 aa12.36□□□□□ -0.43
Cd44-204ENSMUST00000111190 TnnQ80Z71 1560 aa12.3□□□□□ -0.44
Cd44-204ENSMUST00000111190 Ppargc1bQ8VHJ7 1014 aa12.29□□□□□ -0.44
Cd44-204ENSMUST00000111190 Kif21aQ9QXL2 1672 aa12.29□□□□□ -0.44
Cd44-204ENSMUST00000111190 Top2aQ01320 1528 aaKnown RBP12.26□□□□□ -0.45
Cd44-204ENSMUST00000111190 Shroom2A2ALU4 1481 aa12.25□□□□□ -0.45
Cd44-204ENSMUST00000111190 Lamc3Q9R0B6 1581 aa12.23□□□□□ -0.45
Cd44-204ENSMUST00000111190 Pabpn1Q8CCS6 302 aaKnown RBP12.22□□□□□ -0.45
Cd44-204ENSMUST00000111190 Il27Q8K3I6 234 aa12.21□□□□□ -0.45
Cd44-204ENSMUST00000111190 Eif4g3Q80XI3 1579 aaKnown RBP12.21□□□□□ -0.45
Cd44-204ENSMUST00000111190 Dmrt2Q8BG36 561 aa12.2□□□□□ -0.46
Cd44-204ENSMUST00000111190 Urb2E9Q7L1 1524 aaKnown RBP12.18□□□□□ -0.46
Cd44-204ENSMUST00000111190 Dhx29Q6PGC1 1365 aaKnown RBP12.17□□□□□ -0.46
Cd44-204ENSMUST00000111190 Plb1Q3TTY0 1478 aa12.16□□□□□ -0.46
Cd44-204ENSMUST00000111190 Col17a1Q07563 1470 aa12.15□□□□□ -0.46
Cd44-204ENSMUST00000111190 Ccdc18Q640L5 1455 aa12.13□□□□□ -0.47
Cd44-204ENSMUST00000111190 LrpprcQ6PB66 1392 aaKnown RBP12.13□□□□□ -0.47
Cd44-204ENSMUST00000111190 Pelp1Q9DBD5 1123 aaKnown RBP12.12□□□□□ -0.47
Cd44-204ENSMUST00000111190 Trap1aP19473 224 aa12.11□□□□□ -0.47
Cd44-204ENSMUST00000111190 Rapgef2Q8CHG7 1496 aa12.11□□□□□ -0.47
Cd44-204ENSMUST00000111190 Camsap1A2AHC3 1581 aa12.09□□□□□ -0.47
Cd44-204ENSMUST00000111190 Ift140E9PY46 1464 aa12.03□□□□□ -0.48
Cd44-204ENSMUST00000111190 Crocc2F6XLV1 1638 aa12.03□□□□□ -0.48
Cd44-204ENSMUST00000111190 Rpgrip1Q9EPQ2 1331 aa12.02□□□□□ -0.49
Cd44-204ENSMUST00000111190 Eif4g1Q6NZJ6 1600 aaKnown RBP12.02□□□□□ -0.49
Cd44-204ENSMUST00000111190 PogzQ8BZH4 1409 aaKnown RBP12□□□□□ -0.49
Cd44-204ENSMUST00000111190 Hoxd11P23813 323 aa11.99□□□□□ -0.49
Cd44-204ENSMUST00000111190 Cep162Q6ZQ06 1403 aa11.98□□□□□ -0.49
Cd44-204ENSMUST00000111190 Rusc2Q80U22 1514 aa11.97□□□□□ -0.49
Cd44-204ENSMUST00000111190 NrkQ9R0G8 1455 aa11.96□□□□□ -0.49
Cd44-204ENSMUST00000111190 Shroom4Q1W617 1475 aa11.95□□□□□ -0.5
Cd44-204ENSMUST00000111190 Ehmt2Q9Z148 1263 aaKnown RBP11.94□□□□□ -0.5
Cd44-204ENSMUST00000111190 Grin2bQ01097 1482 aa11.94□□□□□ -0.5
Cd44-204ENSMUST00000111190 Duox2A2AQ99 1517 aa11.94□□□□□ -0.5
Cd44-204ENSMUST00000111190 Zcchc11B2RX14 1644 aaKnown RBP11.93□□□□□ -0.5
Cd44-204ENSMUST00000111190 Acin1Q9JIX8 1338 aaKnown RBP11.93□□□□□ -0.5
Cd44-204ENSMUST00000111190 Disp1Q3TDN0 1521 aa11.91□□□□□ -0.5
Cd44-204ENSMUST00000111190 Npm2Q80W85 207 aa11.89□□□□□ -0.51
Cd44-204ENSMUST00000111190 Cc2d2bA0A286YDU8 1405 aa11.88□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms