RNA–Protein interactions for RNA: ENSMUST00000099673.8

Cd44-203, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 2,848 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-203ENSMUST00000099673 Gm35339A0A140LHH9 1649 aa11.25□□□□□ -0.61
Cd44-203ENSMUST00000099673 NischQ80TM9 1593 aa11.11□□□□□ -0.63
Cd44-203ENSMUST00000099673 Abcc9P70170 1546 aa10.91□□□□□ -0.66
Cd44-203ENSMUST00000099673 Abcc8B2RUS7 1588 aa10.62□□□□□ -0.71
Cd44-203ENSMUST00000099673 Rtl1Q7M732 1744 aa10.35□□□□□ -0.75
Cd44-203ENSMUST00000099673 Rhox8Q6VSS7 320 aa10.23□□□□□ -0.77
Cd44-203ENSMUST00000099673 Dcaf1Q80TR8 1506 aa10.12□□□□□ -0.79
Cd44-203ENSMUST00000099673 Ccdc180J3QNE4 1664 aa10.02□□□□□ -0.81
Cd44-203ENSMUST00000099673 ScribQ80U72 1612 aa9.91□□□□□ -0.82
Cd44-203ENSMUST00000099673 Zcchc6Q5BLK4 1491 aaKnown RBP9.81□□□□□ -0.84
Cd44-203ENSMUST00000099673 Rb1cc1Q9ESK9 1588 aa9.73□□□□□ -0.85
Cd44-203ENSMUST00000099673 Baz1aO88379 1555 aa9.69□□□□□ -0.86
Cd44-203ENSMUST00000099673 Crybg2B7ZCC2 1516 aa9.68□□□□□ -0.86
Cd44-203ENSMUST00000099673 Kdm5dQ62240 1548 aa9.67□□□□□ -0.86
Cd44-203ENSMUST00000099673 NacadQ5SWP3 1504 aa9.66□□□□□ -0.86
Cd44-203ENSMUST00000099673 Ccdc136Q3TVA9 1136 aa9.51□□□□□ -0.89
Cd44-203ENSMUST00000099673 Smarca2Q6DIC0 1577 aa9.5□□□□□ -0.89
Cd44-203ENSMUST00000099673 Sycp2Q9CUU3 1500 aa9.44□□□□□ -0.9
Cd44-203ENSMUST00000099673 Rpgrip1Q9EPQ2 1331 aa9.42□□□□□ -0.9
Cd44-203ENSMUST00000099673 HrcG5E8J6 738 aa9.41□□□□□ -0.9
Cd44-203ENSMUST00000099673 Chic1Q8CBW7 227 aa9.31□□□□□ -0.92
Cd44-203ENSMUST00000099673 Trim41Q5NCC3 630 aa9.26□□□□□ -0.93
Cd44-203ENSMUST00000099673 Ehmt2Q9Z148 1263 aaKnown RBP9.23□□□□□ -0.93
Cd44-203ENSMUST00000099673 BicraF8VPZ9 1578 aa9.21□□□□□ -0.93
Cd44-203ENSMUST00000099673 Acin1Q9JIX8 1338 aaKnown RBP9.17□□□□□ -0.94
Cd44-203ENSMUST00000099673 Brd4Q9ESU6 1400 aaKnown RBP9.16□□□□□ -0.94
Cd44-203ENSMUST00000099673 Cecr2E9Q2Z1 1453 aa9.16□□□□□ -0.94
Cd44-203ENSMUST00000099673 Cep164Q5DU05 1446 aa9.15□□□□□ -0.94
Cd44-203ENSMUST00000099673 Cttnbp2B9EJA2 1648 aa9.09□□□□□ -0.95
Cd44-203ENSMUST00000099673 Top2bQ64511 1612 aa9.09□□□□□ -0.95
Cd44-203ENSMUST00000099673 Cngb1E1AZ71 1325 aa9.09□□□□□ -0.96
Cd44-203ENSMUST00000099673 Synj1Q8CHC4 1574 aa9.08□□□□□ -0.96
Cd44-203ENSMUST00000099673 Rsf1E9PWW9 1441 aaKnown RBP9.07□□□□□ -0.96
Cd44-203ENSMUST00000099673 Golga3P55937 1487 aa9.04□□□□□ -0.96
Cd44-203ENSMUST00000099673 CftrP26361 1476 aa9.03□□□□□ -0.96
Cd44-203ENSMUST00000099673 Smarca4Q3TKT4 1613 aaKnown RBP9.03□□□□□ -0.96
Cd44-203ENSMUST00000099673 Ccdc88bQ4QRL3 1481 aa9.02□□□□□ -0.97
Cd44-203ENSMUST00000099673 Gab3Q8BSM5 595 aa8.99□□□□□ -0.97
Cd44-203ENSMUST00000099673 Esf1Q3V1V3 845 aaKnown RBP8.94□□□□□ -0.98
Cd44-203ENSMUST00000099673 Cypt1Q8CH20 168 aa8.94□□□□□ -0.98
Cd44-203ENSMUST00000099673 Cc2d2aQ8CFW7 1633 aa8.89□□□□□ -0.99
Cd44-203ENSMUST00000099673 Iqgap2Q3UQ44 1575 aa8.87□□□□□ -0.99
Cd44-203ENSMUST00000099673 Fmn1Q05860 1466 aa8.86□□□□□ -0.99
Cd44-203ENSMUST00000099673 TnnQ80Z71 1560 aa8.85□□□□□ -0.99
Cd44-203ENSMUST00000099673 Top2aQ01320 1528 aaKnown RBP8.84□□□□□ -0.99
Cd44-203ENSMUST00000099673 Atad2bE9Q166 1460 aaKnown RBP8.84□□□□□ -0.99
Cd44-203ENSMUST00000099673 Rapgef2Q8CHG7 1496 aa8.79□□□□□ -1
Cd44-203ENSMUST00000099673 Pds5bQ4VA53 1446 aaKnown RBP8.79□□□□□ -1
Cd44-203ENSMUST00000099673 Eif4g1Q6NZJ6 1600 aaKnown RBP8.79□□□□□ -1
Cd44-203ENSMUST00000099673 Pcgf6Q99NA9 353 aa8.78□□□□□ -1
Cd44-203ENSMUST00000099673 Dnajc5P60904 198 aa8.78□□□□□ -1
Cd44-203ENSMUST00000099673 Wdr62Q3U3T8 1523 aa8.73□□□□□ -1.01
Cd44-203ENSMUST00000099673 Mier1Q5UAK0 511 aa8.72□□□□□ -1.01
Cd44-203ENSMUST00000099673 Lamc3Q9R0B6 1581 aa8.71□□□□□ -1.01
Cd44-203ENSMUST00000099673 Unc13aQ4KUS2 1712 aa8.69□□□□□ -1.02
Cd44-203ENSMUST00000099673 Cep162Q6ZQ06 1403 aa8.69□□□□□ -1.02
Cd44-203ENSMUST00000099673 Supt5hO55201 1082 aaKnown RBP8.68□□□□□ -1.02
Cd44-203ENSMUST00000099673 Frmpd1A2AKB4 1549 aa8.66□□□□□ -1.02
Cd44-203ENSMUST00000099673 Myt1lP97500 1187 aa8.66□□□□□ -1.02
Cd44-203ENSMUST00000099673 NefmP08553 848 aa8.64□□□□□ -1.03
Cd44-203ENSMUST00000099673 NrkQ9R0G8 1455 aa8.63□□□□□ -1.03
Cd44-203ENSMUST00000099673 Mapk8ip2Q9ERE9 830 aa8.63□□□□□ -1.03
Cd44-203ENSMUST00000099673 UbtfP25976 765 aaKnown RBP8.62□□□□□ -1.03
Cd44-203ENSMUST00000099673 Zeb1Q64318 1117 aa8.62□□□□□ -1.03
Cd44-203ENSMUST00000099673 Plppr3Q7TPB0 716 aa8.62□□□□□ -1.03
Cd44-203ENSMUST00000099673 Npm2Q80W85 207 aa8.62□□□□□ -1.03
Cd44-203ENSMUST00000099673 Map3k1P53349 1493 aa8.6□□□□□ -1.03
Cd44-203ENSMUST00000099673 Phf23Q8BSN5 401 aa8.59□□□□□ -1.03
Cd44-203ENSMUST00000099673 Thoc2B1AZI6 1594 aaKnown RBP8.59□□□□□ -1.03
Cd44-203ENSMUST00000099673 Camsap1A2AHC3 1581 aa8.58□□□□□ -1.04
Cd44-203ENSMUST00000099673 Baz1bQ9Z277 1479 aa8.58□□□□□ -1.04
Cd44-203ENSMUST00000099673 Ercc6F8VPZ5 1481 aa8.58□□□□□ -1.04
Cd44-203ENSMUST00000099673 PtprkP35822 1457 aa8.57□□□□□ -1.04
Cd44-203ENSMUST00000099673 Ccdc18Q640L5 1455 aa8.57□□□□□ -1.04
Cd44-203ENSMUST00000099673 Arhgap35Q91YM2 1499 aa8.55□□□□□ -1.04
Cd44-203ENSMUST00000099673 Clip1Q922J3 1391 aa8.55□□□□□ -1.04
Cd44-203ENSMUST00000099673 Kif15Q6P9L6 1387 aa8.54□□□□□ -1.04
Cd44-203ENSMUST00000099673 Il27Q8K3I6 234 aa8.54□□□□□ -1.04
Cd44-203ENSMUST00000099673 Erich3F6QRE9 1637 aa8.54□□□□□ -1.04
Cd44-203ENSMUST00000099673 Shroom4Q1W617 1475 aa8.54□□□□□ -1.04
Cd44-203ENSMUST00000099673 AqrQ8CFQ3 1481 aaKnown RBP8.53□□□□□ -1.04
Cd44-203ENSMUST00000099673 Plekhg3Q4VAC9 1341 aa8.53□□□□□ -1.04
Cd44-203ENSMUST00000099673 Fam135aQ6NS59 1506 aa8.51□□□□□ -1.05
Cd44-203ENSMUST00000099673 Sall2Q9QX96 1004 aa8.49□□□□□ -1.05
Cd44-203ENSMUST00000099673 Grin2bQ01097 1482 aa8.49□□□□□ -1.05
Cd44-203ENSMUST00000099673 Arap1Q4LDD4 1452 aa8.47□□□□□ -1.05
Cd44-203ENSMUST00000099673 TchhA0A0B4J1F9 1599 aa8.47□□□□□ -1.05
Cd44-203ENSMUST00000099673 Arhgef5E9Q7D5 1581 aa8.45□□□□□ -1.06
Cd44-203ENSMUST00000099673 Ncapd3Q6ZQK0 1506 aa8.45□□□□□ -1.06
Cd44-203ENSMUST00000099673 Phldb1Q6PDH0 1371 aaKnown RBP8.45□□□□□ -1.06
Cd44-203ENSMUST00000099673 Eea1Q8BL66 1411 aa8.45□□□□□ -1.06
Cd44-203ENSMUST00000099673 Peg3Q3URU2 1571 aa8.45□□□□□ -1.06
Cd44-203ENSMUST00000099673 Mroh2bQ7M6Y6 1581 aa8.45□□□□□ -1.06
Cd44-203ENSMUST00000099673 Gpatch8A2A6A1 1505 aa8.44□□□□□ -1.06
Cd44-203ENSMUST00000099673 Ap3b1Q9Z1T1 1105 aa8.44□□□□□ -1.06
Cd44-203ENSMUST00000099673 Aebp2Q9Z248 504 aaKnown RBP8.43□□□□□ -1.06
Cd44-203ENSMUST00000099673 Lmo7E9PYF4 1699 aaKnown RBP8.42□□□□□ -1.06
Cd44-203ENSMUST00000099673 Setd5Q5XJV7 1441 aa8.42□□□□□ -1.06
Cd44-203ENSMUST00000099673 Neurod1Q60867 357 aa8.42□□□□□ -1.06
Cd44-203ENSMUST00000099673 Tiam1Q60610 1591 aa8.41□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 169.4 ms