RNA–Protein interactions for RNA: ENSMUST00000092849.11

Lig3-203, Transcript of DNA ligase 3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Lig3, Length 4,560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-203ENSMUST00000092849 NischQ80TM9 1593 aa17.25■□□□□ 0.35
Lig3-203ENSMUST00000092849 Gm35339A0A140LHH9 1649 aa16.71■□□□□ 0.27
Lig3-203ENSMUST00000092849 Abcc9P70170 1546 aa16.52■□□□□ 0.24
Lig3-203ENSMUST00000092849 Rhox8Q6VSS7 320 aa16.38■□□□□ 0.21
Lig3-203ENSMUST00000092849 Abcc8B2RUS7 1588 aa16.35■□□□□ 0.21
Lig3-203ENSMUST00000092849 NacadQ5SWP3 1504 aa15.42■□□□□ 0.06
Lig3-203ENSMUST00000092849 Dcaf1Q80TR8 1506 aa15.25■□□□□ 0.03
Lig3-203ENSMUST00000092849 ScribQ80U72 1612 aa15.22■□□□□ 0.03
Lig3-203ENSMUST00000092849 Kdm5dQ62240 1548 aa15.18■□□□□ 0.02
Lig3-203ENSMUST00000092849 Rb1cc1Q9ESK9 1588 aa15.08■□□□□ 0.01
Lig3-203ENSMUST00000092849 Rtl1Q7M732 1744 aa15.07■□□□□ 0
Lig3-203ENSMUST00000092849 Zcchc6Q5BLK4 1491 aaKnown RBP15.06■□□□□ 0
Lig3-203ENSMUST00000092849 Rpgrip1Q9EPQ2 1331 aa14.95□□□□□ -0.02
Lig3-203ENSMUST00000092849 Trim41Q5NCC3 630 aa14.94□□□□□ -0.02
Lig3-203ENSMUST00000092849 Ccdc136Q3TVA9 1136 aa14.93□□□□□ -0.02
Lig3-203ENSMUST00000092849 Sycp2Q9CUU3 1500 aa14.92□□□□□ -0.02
Lig3-203ENSMUST00000092849 Esf1Q3V1V3 845 aaKnown RBP14.89□□□□□ -0.03
Lig3-203ENSMUST00000092849 Baz1aO88379 1555 aa14.88□□□□□ -0.03
Lig3-203ENSMUST00000092849 Ccdc180J3QNE4 1664 aa14.79□□□□□ -0.04
Lig3-203ENSMUST00000092849 Crybg2B7ZCC2 1516 aa14.72□□□□□ -0.05
Lig3-203ENSMUST00000092849 Pds5bQ4VA53 1446 aaKnown RBP14.62□□□□□ -0.07
Lig3-203ENSMUST00000092849 Cngb1E1AZ71 1325 aa14.61□□□□□ -0.07
Lig3-203ENSMUST00000092849 Brd4Q9ESU6 1400 aaKnown RBP14.55□□□□□ -0.08
Lig3-203ENSMUST00000092849 Ercc6F8VPZ5 1481 aa14.5□□□□□ -0.09
Lig3-203ENSMUST00000092849 Atad2bE9Q166 1460 aaKnown RBP14.38□□□□□ -0.11
Lig3-203ENSMUST00000092849 HrcG5E8J6 738 aa14.32□□□□□ -0.12
Lig3-203ENSMUST00000092849 BicraF8VPZ9 1578 aa14.3□□□□□ -0.12
Lig3-203ENSMUST00000092849 Smarca2Q6DIC0 1577 aa14.29□□□□□ -0.12
Lig3-203ENSMUST00000092849 Ubl4bQ9CQ84 188 aa14.27□□□□□ -0.13
Lig3-203ENSMUST00000092849 Smarca4Q3TKT4 1613 aaKnown RBP14.25□□□□□ -0.13
Lig3-203ENSMUST00000092849 Npm1Q61937 292 aaKnown RBP14.2□□□□□ -0.14
Lig3-203ENSMUST00000092849 Las1lA2BE28 776 aaKnown RBP14.17□□□□□ -0.14
Lig3-203ENSMUST00000092849 Il27Q8K3I6 234 aa14.17□□□□□ -0.14
Lig3-203ENSMUST00000092849 Zeb1Q64318 1117 aa14.16□□□□□ -0.14
Lig3-203ENSMUST00000092849 Npm2Q80W85 207 aa14.14□□□□□ -0.15
Lig3-203ENSMUST00000092849 Cecr2E9Q2Z1 1453 aa14.12□□□□□ -0.15
Lig3-203ENSMUST00000092849 Ehmt2Q9Z148 1263 aaKnown RBP14.11□□□□□ -0.15
Lig3-203ENSMUST00000092849 Rsf1E9PWW9 1441 aaKnown RBP14.11□□□□□ -0.15
Lig3-203ENSMUST00000092849 Phldb1Q6PDH0 1371 aaKnown RBP14.1□□□□□ -0.15
Lig3-203ENSMUST00000092849 Iqgap2Q3UQ44 1575 aa14.09□□□□□ -0.15
Lig3-203ENSMUST00000092849 CftrP26361 1476 aa14.06□□□□□ -0.16
Lig3-203ENSMUST00000092849 Cttnbp2B9EJA2 1648 aa14□□□□□ -0.17
Lig3-203ENSMUST00000092849 Kif15Q6P9L6 1387 aa14□□□□□ -0.17
Lig3-203ENSMUST00000092849 Golga3P55937 1487 aa13.98□□□□□ -0.17
Lig3-203ENSMUST00000092849 Gab3Q8BSM5 595 aa13.98□□□□□ -0.17
Lig3-203ENSMUST00000092849 Dnajc5bQ9CQ94 199 aa13.98□□□□□ -0.17
Lig3-203ENSMUST00000092849 Synj1Q8CHC4 1574 aa13.93□□□□□ -0.18
Lig3-203ENSMUST00000092849 Wdr66E9Q743 1299 aa13.93□□□□□ -0.18
Lig3-203ENSMUST00000092849 Ccdc18Q640L5 1455 aa13.9□□□□□ -0.18
Lig3-203ENSMUST00000092849 Cep164Q5DU05 1446 aa13.89□□□□□ -0.19
Lig3-203ENSMUST00000092849 Pelp1Q9DBD5 1123 aaKnown RBP13.88□□□□□ -0.19
Lig3-203ENSMUST00000092849 Baz1bQ9Z277 1479 aa13.86□□□□□ -0.19
Lig3-203ENSMUST00000092849 Frmpd1A2AKB4 1549 aa13.83□□□□□ -0.2
Lig3-203ENSMUST00000092849 Wdr62Q3U3T8 1523 aa13.83□□□□□ -0.2
Lig3-203ENSMUST00000092849 Myt1lP97500 1187 aa13.82□□□□□ -0.2
Lig3-203ENSMUST00000092849 Ube2uB1AUC4 352 aa13.82□□□□□ -0.2
Lig3-203ENSMUST00000092849 Cux2P70298 1426 aa13.77□□□□□ -0.2
Lig3-203ENSMUST00000092849 Cc2d2aQ8CFW7 1633 aa13.76□□□□□ -0.21
Lig3-203ENSMUST00000092849 Fmn1Q05860 1466 aa13.75□□□□□ -0.21
Lig3-203ENSMUST00000092849 NefmP08553 848 aa13.72□□□□□ -0.21
Lig3-203ENSMUST00000092849 Thoc2B1AZI6 1594 aaKnown RBP13.72□□□□□ -0.21
Lig3-203ENSMUST00000092849 Mrc2Q64449 1479 aa13.69□□□□□ -0.22
Lig3-203ENSMUST00000092849 Acin1Q9JIX8 1338 aaKnown RBP13.68□□□□□ -0.22
Lig3-203ENSMUST00000092849 Fam135aQ6NS59 1506 aa13.67□□□□□ -0.22
Lig3-203ENSMUST00000092849 Chic1Q8CBW7 227 aa13.62□□□□□ -0.23
Lig3-203ENSMUST00000092849 LrpprcQ6PB66 1392 aaKnown RBP13.55□□□□□ -0.24
Lig3-203ENSMUST00000092849 Stra8P70278 393 aa13.54□□□□□ -0.24
Lig3-203ENSMUST00000092849 Dhx29Q6PGC1 1365 aaKnown RBP13.5□□□□□ -0.25
Lig3-203ENSMUST00000092849 Lamc3Q9R0B6 1581 aa13.47□□□□□ -0.25
Lig3-203ENSMUST00000092849 CenpbP27790 599 aa13.46□□□□□ -0.26
Lig3-203ENSMUST00000092849 Ccdc88bQ4QRL3 1481 aa13.44□□□□□ -0.26
Lig3-203ENSMUST00000092849 UbtfP25976 765 aaKnown RBP13.42□□□□□ -0.26
Lig3-203ENSMUST00000092849 Top2bQ64511 1612 aa13.39□□□□□ -0.27
Lig3-203ENSMUST00000092849 Efcab5A0JP43 1406 aa13.36□□□□□ -0.27
Lig3-203ENSMUST00000092849 Urb2E9Q7L1 1524 aaKnown RBP13.33□□□□□ -0.27
Lig3-203ENSMUST00000092849 PogzQ8BZH4 1409 aaKnown RBP13.33□□□□□ -0.28
Lig3-203ENSMUST00000092849 Ap3b1Q9Z1T1 1105 aa13.32□□□□□ -0.28
Lig3-203ENSMUST00000092849 Clip1Q922J3 1391 aa13.32□□□□□ -0.28
Lig3-203ENSMUST00000092849 Camsap1A2AHC3 1581 aa13.31□□□□□ -0.28
Lig3-203ENSMUST00000092849 Ift140E9PY46 1464 aa13.3□□□□□ -0.28
Lig3-203ENSMUST00000092849 Duox2A2AQ99 1517 aa13.28□□□□□ -0.28
Lig3-203ENSMUST00000092849 NrkQ9R0G8 1455 aa13.28□□□□□ -0.28
Lig3-203ENSMUST00000092849 Ttbk1Q6PCN3 1308 aa13.27□□□□□ -0.28
Lig3-203ENSMUST00000092849 Grin2bQ01097 1482 aa13.27□□□□□ -0.28
Lig3-203ENSMUST00000092849 Top2aQ01320 1528 aaKnown RBP13.27□□□□□ -0.29
Lig3-203ENSMUST00000092849 Arhgap27A2AB59 869 aa13.26□□□□□ -0.29
Lig3-203ENSMUST00000092849 Crocc2F6XLV1 1638 aa13.25□□□□□ -0.29
Lig3-203ENSMUST00000092849 Shroom4Q1W617 1475 aa13.24□□□□□ -0.29
Lig3-203ENSMUST00000092849 Carmil1Q6EDY6 1374 aa13.23□□□□□ -0.29
Lig3-203ENSMUST00000092849 Pabpn1Q8CCS6 302 aaKnown RBP13.23□□□□□ -0.29
Lig3-203ENSMUST00000092849 Plb1Q3TTY0 1478 aa13.22□□□□□ -0.29
Lig3-203ENSMUST00000092849 TnnQ80Z71 1560 aa13.22□□□□□ -0.29
Lig3-203ENSMUST00000092849 Cdk11bP24788 784 aaKnown RBP13.2□□□□□ -0.3
Lig3-203ENSMUST00000092849 Cc2d2bA0A286YDU8 1405 aa13.2□□□□□ -0.3
Lig3-203ENSMUST00000092849 Setd5Q5XJV7 1441 aa13.2□□□□□ -0.3
Lig3-203ENSMUST00000092849 Cep162Q6ZQ06 1403 aa13.2□□□□□ -0.3
Lig3-203ENSMUST00000092849 Fkbp15Q6P9Q6 1216 aaKnown RBP13.18□□□□□ -0.3
Lig3-203ENSMUST00000092849 AknaQ80VW7 1404 aa13.18□□□□□ -0.3
Lig3-203ENSMUST00000092849 Rpap1Q80TE0 1409 aa13.17□□□□□ -0.3
Lig3-203ENSMUST00000092849 Eea1Q8BL66 1411 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms