RNA–Protein interactions for RNA: ENSMUST00000092420.12

Pcdh15-202, Transcript of Protocadherin-15, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdh15, Length 6,917 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15-202ENSMUST00000092420 NischQ80TM9 1593 aa10.55□□□□□ -0.72
Pcdh15-202ENSMUST00000092420 Pelp1Q9DBD5 1123 aaKnown RBP10.52□□□□□ -0.73
Pcdh15-202ENSMUST00000092420 Cngb1E1AZ71 1325 aa10.5□□□□□ -0.73
Pcdh15-202ENSMUST00000092420 Amer1Q7TS75 1132 aa10.36□□□□□ -0.75
Pcdh15-202ENSMUST00000092420 Rpgrip1Q9EPQ2 1331 aa10.34□□□□□ -0.75
Pcdh15-202ENSMUST00000092420 Las1lA2BE28 776 aaKnown RBP10.3□□□□□ -0.76
Pcdh15-202ENSMUST00000092420 4930567H17RikQ3V0K5 233 aa10.27□□□□□ -0.77
Pcdh15-202ENSMUST00000092420 Rhox8Q6VSS7 320 aa10.17□□□□□ -0.78
Pcdh15-202ENSMUST00000092420 Abcc9P70170 1546 aa10.15□□□□□ -0.79
Pcdh15-202ENSMUST00000092420 Gm35339A0A140LHH9 1649 aa10.11□□□□□ -0.79
Pcdh15-202ENSMUST00000092420 Wdr66E9Q743 1299 aa10□□□□□ -0.81
Pcdh15-202ENSMUST00000092420 Abcc8B2RUS7 1588 aa9.97□□□□□ -0.81
Pcdh15-202ENSMUST00000092420 CenpbP27790 599 aa9.67□□□□□ -0.86
Pcdh15-202ENSMUST00000092420 4933416C03RikQ3V063 378 aa9.54□□□□□ -0.88
Pcdh15-202ENSMUST00000092420 Ttbk1Q6PCN3 1308 aa9.54□□□□□ -0.88
Pcdh15-202ENSMUST00000092420 Dcaf1Q80TR8 1506 aa9.46□□□□□ -0.89
Pcdh15-202ENSMUST00000092420 Ube2uB1AUC4 352 aa9.45□□□□□ -0.9
Pcdh15-202ENSMUST00000092420 Myt1Q8CFC2 1127 aa9.42□□□□□ -0.9
Pcdh15-202ENSMUST00000092420 Rtl1Q7M732 1744 aa9.41□□□□□ -0.9
Pcdh15-202ENSMUST00000092420 Trim41Q5NCC3 630 aa9.36□□□□□ -0.91
Pcdh15-202ENSMUST00000092420 NacadQ5SWP3 1504 aa9.34□□□□□ -0.91
Pcdh15-202ENSMUST00000092420 Ehmt2Q9Z148 1263 aaKnown RBP9.32□□□□□ -0.92
Pcdh15-202ENSMUST00000092420 Ythdc1E9Q5K9 736 aaKnown RBP9.3□□□□□ -0.92
Pcdh15-202ENSMUST00000092420 Zeb1Q64318 1117 aa9.3□□□□□ -0.92
Pcdh15-202ENSMUST00000092420 Ccdc180J3QNE4 1664 aa9.27□□□□□ -0.93
Pcdh15-202ENSMUST00000092420 Stra8P70278 393 aa9.26□□□□□ -0.93
Pcdh15-202ENSMUST00000092420 Ccdc136Q3TVA9 1136 aa9.21□□□□□ -0.94
Pcdh15-202ENSMUST00000092420 Rb1cc1Q9ESK9 1588 aa9.19□□□□□ -0.94
Pcdh15-202ENSMUST00000092420 Zcchc6Q5BLK4 1491 aaKnown RBP9.17□□□□□ -0.94
Pcdh15-202ENSMUST00000092420 CatipB9EKE5 520 aa9.16□□□□□ -0.94
Pcdh15-202ENSMUST00000092420 HrcG5E8J6 738 aa9.15□□□□□ -0.94
Pcdh15-202ENSMUST00000092420 Rtl5Q5DTT4 599 aa9.15□□□□□ -0.94
Pcdh15-202ENSMUST00000092420 Baz1aO88379 1555 aa9.15□□□□□ -0.94
Pcdh15-202ENSMUST00000092420 Kdm5dQ62240 1548 aa9.14□□□□□ -0.95
Pcdh15-202ENSMUST00000092420 Crybg2B7ZCC2 1516 aa9.14□□□□□ -0.95
Pcdh15-202ENSMUST00000092420 DiexfQ8BTT6 772 aaKnown RBP9.14□□□□□ -0.95
Pcdh15-202ENSMUST00000092420 Slc24a1Q91WD8 1130 aa9.11□□□□□ -0.95
Pcdh15-202ENSMUST00000092420 ScribQ80U72 1612 aa9.1□□□□□ -0.95
Pcdh15-202ENSMUST00000092420 Esf1Q3V1V3 845 aaKnown RBP9.09□□□□□ -0.95
Pcdh15-202ENSMUST00000092420 NeflP08551 543 aa9.04□□□□□ -0.96
Pcdh15-202ENSMUST00000092420 Brd4Q9ESU6 1400 aaKnown RBP9.02□□□□□ -0.97
Pcdh15-202ENSMUST00000092420 Sycp2Q9CUU3 1500 aa9.01□□□□□ -0.97
Pcdh15-202ENSMUST00000092420 Myt1lP97500 1187 aa8.97□□□□□ -0.97
Pcdh15-202ENSMUST00000092420 Tnnt3Q9QZ47 272 aa8.91□□□□□ -0.98
Pcdh15-202ENSMUST00000092420 Cdk11bP24788 784 aaKnown RBP8.88□□□□□ -0.99
Pcdh15-202ENSMUST00000092420 Anp32bQ9EST5 272 aaKnown RBP8.88□□□□□ -0.99
Pcdh15-202ENSMUST00000092420 DaxxO35613 739 aa8.87□□□□□ -0.99
Pcdh15-202ENSMUST00000092420 Lmod3E9QA62 571 aa8.86□□□□□ -0.99
Pcdh15-202ENSMUST00000092420 NrdcQ8BHG1 1161 aa8.86□□□□□ -0.99
Pcdh15-202ENSMUST00000092420 NefmP08553 848 aa8.81□□□□□ -1
Pcdh15-202ENSMUST00000092420 Smarca2Q6DIC0 1577 aa8.8□□□□□ -1
Pcdh15-202ENSMUST00000092420 Pds5bQ4VA53 1446 aaKnown RBP8.8□□□□□ -1
Pcdh15-202ENSMUST00000092420 Eif5bQ05D44 1216 aaKnown RBP8.8□□□□□ -1
Pcdh15-202ENSMUST00000092420 Upf2A2AT37 1269 aaKnown RBP8.77□□□□□ -1.01
Pcdh15-202ENSMUST00000092420 Npm2Q80W85 207 aa8.77□□□□□ -1.01
Pcdh15-202ENSMUST00000092420 Cep164Q5DU05 1446 aa8.74□□□□□ -1.01
Pcdh15-202ENSMUST00000092420 Golga3P55937 1487 aa8.73□□□□□ -1.01
Pcdh15-202ENSMUST00000092420 Atad2bE9Q166 1460 aaKnown RBP8.7□□□□□ -1.02
Pcdh15-202ENSMUST00000092420 Gab3Q8BSM5 595 aa8.69□□□□□ -1.02
Pcdh15-202ENSMUST00000092420 Hsp90aa1P07901 733 aaKnown RBP8.68□□□□□ -1.02
Pcdh15-202ENSMUST00000092420 Ercc6F8VPZ5 1481 aa8.66□□□□□ -1.02
Pcdh15-202ENSMUST00000092420 CftrP26361 1476 aa8.65□□□□□ -1.02
Pcdh15-202ENSMUST00000092420 Smarca4Q3TKT4 1613 aaKnown RBP8.62□□□□□ -1.03
Pcdh15-202ENSMUST00000092420 Rsf1E9PWW9 1441 aaKnown RBP8.61□□□□□ -1.03
Pcdh15-202ENSMUST00000092420 Os9Q8K2C7 672 aa8.61□□□□□ -1.03
Pcdh15-202ENSMUST00000092420 Npm1Q61937 292 aaKnown RBP8.6□□□□□ -1.03
Pcdh15-202ENSMUST00000092420 Nop58Q6DFW4 536 aaKnown RBP8.59□□□□□ -1.03
Pcdh15-202ENSMUST00000092420 Cecr2E9Q2Z1 1453 aa8.58□□□□□ -1.04
Pcdh15-202ENSMUST00000092420 BccipQ9CWI3 316 aa8.58□□□□□ -1.04
Pcdh15-202ENSMUST00000092420 Anp32aO35381 247 aa8.57□□□□□ -1.04
Pcdh15-202ENSMUST00000092420 Podxl2Q8CAE9 603 aa8.55□□□□□ -1.04
Pcdh15-202ENSMUST00000092420 BicraF8VPZ9 1578 aa8.54□□□□□ -1.04
Pcdh15-202ENSMUST00000092420 Fmn1Q05860 1466 aa8.54□□□□□ -1.04
Pcdh15-202ENSMUST00000092420 Il27Q8K3I6 234 aa8.54□□□□□ -1.04
Pcdh15-202ENSMUST00000092420 Polr3glQ8R0C0 218 aa8.54□□□□□ -1.04
Pcdh15-202ENSMUST00000092420 Cttnbp2B9EJA2 1648 aa8.54□□□□□ -1.04
Pcdh15-202ENSMUST00000092420 Acin1Q9JIX8 1338 aaKnown RBP8.53□□□□□ -1.04
Pcdh15-202ENSMUST00000092420 UbtfP25976 765 aaKnown RBP8.53□□□□□ -1.04
Pcdh15-202ENSMUST00000092420 Ubl4bQ9CQ84 188 aa8.52□□□□□ -1.05
Pcdh15-202ENSMUST00000092420 ArxO35085 564 aa8.51□□□□□ -1.05
Pcdh15-202ENSMUST00000092420 Chic1Q8CBW7 227 aa8.5□□□□□ -1.05
Pcdh15-202ENSMUST00000092420 Trim44Q9QXA7 346 aa8.5□□□□□ -1.05
Pcdh15-202ENSMUST00000092420 Phldb1Q6PDH0 1371 aaKnown RBP8.5□□□□□ -1.05
Pcdh15-202ENSMUST00000092420 Neurod1Q60867 357 aa8.5□□□□□ -1.05
Pcdh15-202ENSMUST00000092420 Synj1Q8CHC4 1574 aa8.49□□□□□ -1.05
Pcdh15-202ENSMUST00000092420 Ccdc18Q640L5 1455 aa8.49□□□□□ -1.05
Pcdh15-202ENSMUST00000092420 Kif15Q6P9L6 1387 aa8.49□□□□□ -1.05
Pcdh15-202ENSMUST00000092420 Znf316Q6PGE4 1016 aa8.48□□□□□ -1.05
Pcdh15-202ENSMUST00000092420 Iqgap2Q3UQ44 1575 aa8.47□□□□□ -1.05
Pcdh15-202ENSMUST00000092420 Rangap1P46061 589 aaKnown RBP8.47□□□□□ -1.05
Pcdh15-202ENSMUST00000092420 NclP09405 707 aaKnown RBP8.46□□□□□ -1.05
Pcdh15-202ENSMUST00000092420 Ccdc9Q8VC31 543 aaKnown RBP8.45□□□□□ -1.06
Pcdh15-202ENSMUST00000092420 Tnnt2P50752 301 aa8.45□□□□□ -1.06
Pcdh15-202ENSMUST00000092420 Slc4a1apE9PX68 744 aa8.45□□□□□ -1.06
Pcdh15-202ENSMUST00000092420 Baz1bQ9Z277 1479 aa8.44□□□□□ -1.06
Pcdh15-202ENSMUST00000092420 DekQ7TNV0 380 aaKnown RBP8.41□□□□□ -1.06
Pcdh15-202ENSMUST00000092420 Znf326O88291 580 aa8.39□□□□□ -1.07
Pcdh15-202ENSMUST00000092420 Ccdc88bQ4QRL3 1481 aa8.38□□□□□ -1.07
Pcdh15-202ENSMUST00000092420 Mak16Q8BGS0 296 aaKnown RBP8.38□□□□□ -1.07
Pcdh15-202ENSMUST00000092420 Pcgf6Q99NA9 353 aa8.37□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms