RNA–Protein interactions for RNA: ENSMUST00000081265.11

Ebf1-201, Transcript of Transcription factor COE1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf1, Length 5,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1-201ENSMUST00000081265 NischQ80TM9 1593 aa18.13■□□□□ 0.49
Ebf1-201ENSMUST00000081265 Rhox8Q6VSS7 320 aa18■□□□□ 0.47
Ebf1-201ENSMUST00000081265 Abcc9P70170 1546 aa17.27■□□□□ 0.36
Ebf1-201ENSMUST00000081265 Gm35339A0A140LHH9 1649 aa17.1■□□□□ 0.33
Ebf1-201ENSMUST00000081265 Abcc8B2RUS7 1588 aa17.07■□□□□ 0.32
Ebf1-201ENSMUST00000081265 Ccdc136Q3TVA9 1136 aa16.31■□□□□ 0.2
Ebf1-201ENSMUST00000081265 Trim41Q5NCC3 630 aa16.28■□□□□ 0.2
Ebf1-201ENSMUST00000081265 Esf1Q3V1V3 845 aaKnown RBP16.21■□□□□ 0.19
Ebf1-201ENSMUST00000081265 NacadQ5SWP3 1504 aa16.12■□□□□ 0.17
Ebf1-201ENSMUST00000081265 Zcchc6Q5BLK4 1491 aaKnown RBP16.08■□□□□ 0.16
Ebf1-201ENSMUST00000081265 Cngb1E1AZ71 1325 aa15.93■□□□□ 0.14
Ebf1-201ENSMUST00000081265 Dcaf1Q80TR8 1506 aa15.92■□□□□ 0.14
Ebf1-201ENSMUST00000081265 Rb1cc1Q9ESK9 1588 aa15.84■□□□□ 0.13
Ebf1-201ENSMUST00000081265 Kdm5dQ62240 1548 aa15.79■□□□□ 0.12
Ebf1-201ENSMUST00000081265 Rtl1Q7M732 1744 aa15.7■□□□□ 0.1
Ebf1-201ENSMUST00000081265 ScribQ80U72 1612 aa15.67■□□□□ 0.1
Ebf1-201ENSMUST00000081265 Baz1aO88379 1555 aa15.63■□□□□ 0.09
Ebf1-201ENSMUST00000081265 Ccdc180J3QNE4 1664 aa15.54■□□□□ 0.08
Ebf1-201ENSMUST00000081265 Sycp2Q9CUU3 1500 aa15.53■□□□□ 0.08
Ebf1-201ENSMUST00000081265 Brd4Q9ESU6 1400 aaKnown RBP15.53■□□□□ 0.08
Ebf1-201ENSMUST00000081265 Zeb1Q64318 1117 aa15.5■□□□□ 0.07
Ebf1-201ENSMUST00000081265 Npm2Q80W85 207 aa15.48■□□□□ 0.07
Ebf1-201ENSMUST00000081265 HrcG5E8J6 738 aa15.45■□□□□ 0.06
Ebf1-201ENSMUST00000081265 Crybg2B7ZCC2 1516 aa15.43■□□□□ 0.06
Ebf1-201ENSMUST00000081265 Gab3Q8BSM5 595 aa15.4■□□□□ 0.06
Ebf1-201ENSMUST00000081265 Il27Q8K3I6 234 aa15.37■□□□□ 0.05
Ebf1-201ENSMUST00000081265 Pds5bQ4VA53 1446 aaKnown RBP15.34■□□□□ 0.05
Ebf1-201ENSMUST00000081265 Npm1Q61937 292 aaKnown RBP15.29■□□□□ 0.04
Ebf1-201ENSMUST00000081265 Ercc6F8VPZ5 1481 aa15.22■□□□□ 0.03
Ebf1-201ENSMUST00000081265 Ubl4bQ9CQ84 188 aa15.22■□□□□ 0.03
Ebf1-201ENSMUST00000081265 Myt1lP97500 1187 aa15.2■□□□□ 0.02
Ebf1-201ENSMUST00000081265 Atad2bE9Q166 1460 aaKnown RBP15.08■□□□□ 0
Ebf1-201ENSMUST00000081265 Rsf1E9PWW9 1441 aaKnown RBP15.02□□□□□ -0.01
Ebf1-201ENSMUST00000081265 Smarca2Q6DIC0 1577 aa14.96□□□□□ -0.01
Ebf1-201ENSMUST00000081265 Golga3P55937 1487 aa14.94□□□□□ -0.02
Ebf1-201ENSMUST00000081265 Kif15Q6P9L6 1387 aa14.92□□□□□ -0.02
Ebf1-201ENSMUST00000081265 Smarca4Q3TKT4 1613 aaKnown RBP14.87□□□□□ -0.03
Ebf1-201ENSMUST00000081265 Cecr2E9Q2Z1 1453 aa14.87□□□□□ -0.03
Ebf1-201ENSMUST00000081265 Phldb1Q6PDH0 1371 aaKnown RBP14.86□□□□□ -0.03
Ebf1-201ENSMUST00000081265 CftrP26361 1476 aa14.86□□□□□ -0.03
Ebf1-201ENSMUST00000081265 Ehmt2Q9Z148 1263 aaKnown RBP14.82□□□□□ -0.04
Ebf1-201ENSMUST00000081265 Rpgrip1Q9EPQ2 1331 aa14.81□□□□□ -0.04
Ebf1-201ENSMUST00000081265 Cep164Q5DU05 1446 aa14.79□□□□□ -0.04
Ebf1-201ENSMUST00000081265 Ccdc18Q640L5 1455 aa14.79□□□□□ -0.04
Ebf1-201ENSMUST00000081265 Chic1Q8CBW7 227 aa14.76□□□□□ -0.05
Ebf1-201ENSMUST00000081265 BicraF8VPZ9 1578 aa14.75□□□□□ -0.05
Ebf1-201ENSMUST00000081265 Ube2uB1AUC4 352 aa14.73□□□□□ -0.05
Ebf1-201ENSMUST00000081265 Iqgap2Q3UQ44 1575 aa14.7□□□□□ -0.06
Ebf1-201ENSMUST00000081265 Cttnbp2B9EJA2 1648 aa14.64□□□□□ -0.07
Ebf1-201ENSMUST00000081265 Synj1Q8CHC4 1574 aa14.63□□□□□ -0.07
Ebf1-201ENSMUST00000081265 Fmn1Q05860 1466 aa14.62□□□□□ -0.07
Ebf1-201ENSMUST00000081265 Cux2P70298 1426 aa14.59□□□□□ -0.07
Ebf1-201ENSMUST00000081265 UbtfP25976 765 aaKnown RBP14.59□□□□□ -0.07
Ebf1-201ENSMUST00000081265 Ap3b1Q9Z1T1 1105 aa14.56□□□□□ -0.08
Ebf1-201ENSMUST00000081265 Las1lA2BE28 776 aaKnown RBP14.45□□□□□ -0.1
Ebf1-201ENSMUST00000081265 Frmpd1A2AKB4 1549 aa14.43□□□□□ -0.1
Ebf1-201ENSMUST00000081265 Pelp1Q9DBD5 1123 aaKnown RBP14.43□□□□□ -0.1
Ebf1-201ENSMUST00000081265 Clip1Q922J3 1391 aa14.43□□□□□ -0.1
Ebf1-201ENSMUST00000081265 LrpprcQ6PB66 1392 aaKnown RBP14.4□□□□□ -0.1
Ebf1-201ENSMUST00000081265 Ccdc88bQ4QRL3 1481 aa14.39□□□□□ -0.11
Ebf1-201ENSMUST00000081265 NefmP08553 848 aa14.38□□□□□ -0.11
Ebf1-201ENSMUST00000081265 Lmod2Q3UHZ5 550 aa14.36□□□□□ -0.11
Ebf1-201ENSMUST00000081265 Wdr62Q3U3T8 1523 aa14.36□□□□□ -0.11
Ebf1-201ENSMUST00000081265 Fam50aQ9WV03 339 aaKnown RBP14.35□□□□□ -0.11
Ebf1-201ENSMUST00000081265 Baz1bQ9Z277 1479 aa14.35□□□□□ -0.11
Ebf1-201ENSMUST00000081265 NclP09405 707 aaKnown RBP14.33□□□□□ -0.11
Ebf1-201ENSMUST00000081265 Dhx29Q6PGC1 1365 aaKnown RBP14.33□□□□□ -0.12
Ebf1-201ENSMUST00000081265 Setd5Q5XJV7 1441 aa14.31□□□□□ -0.12
Ebf1-201ENSMUST00000081265 Mrc2Q64449 1479 aa14.31□□□□□ -0.12
Ebf1-201ENSMUST00000081265 Plekhg3Q4VAC9 1341 aa14.3□□□□□ -0.12
Ebf1-201ENSMUST00000081265 Fkbp15Q6P9Q6 1216 aaKnown RBP14.29□□□□□ -0.12
Ebf1-201ENSMUST00000081265 Ifnlr1Q8CGK5 535 aa14.26□□□□□ -0.13
Ebf1-201ENSMUST00000081265 Acin1Q9JIX8 1338 aaKnown RBP14.25□□□□□ -0.13
Ebf1-201ENSMUST00000081265 Eea1Q8BL66 1411 aa14.24□□□□□ -0.13
Ebf1-201ENSMUST00000081265 Cdk11bP24788 784 aaKnown RBP14.24□□□□□ -0.13
Ebf1-201ENSMUST00000081265 Cc2d2aQ8CFW7 1633 aa14.23□□□□□ -0.13
Ebf1-201ENSMUST00000081265 Arhgap27A2AB59 869 aa14.23□□□□□ -0.13
Ebf1-201ENSMUST00000081265 Ttbk1Q6PCN3 1308 aa14.22□□□□□ -0.13
Ebf1-201ENSMUST00000081265 Efcab5A0JP43 1406 aa14.21□□□□□ -0.14
Ebf1-201ENSMUST00000081265 Dnajc5bQ9CQ94 199 aa14.2□□□□□ -0.14
Ebf1-201ENSMUST00000081265 Cep162Q6ZQ06 1403 aa14.19□□□□□ -0.14
Ebf1-201ENSMUST00000081265 BlmO88700 1416 aa14.16□□□□□ -0.14
Ebf1-201ENSMUST00000081265 Carmil1Q6EDY6 1374 aa14.15□□□□□ -0.14
Ebf1-201ENSMUST00000081265 Wdr66E9Q743 1299 aa14.13□□□□□ -0.15
Ebf1-201ENSMUST00000081265 Fam135aQ6NS59 1506 aa14.09□□□□□ -0.15
Ebf1-201ENSMUST00000081265 Rpap1Q80TE0 1409 aa14.08□□□□□ -0.16
Ebf1-201ENSMUST00000081265 PogzQ8BZH4 1409 aaKnown RBP14.08□□□□□ -0.16
Ebf1-201ENSMUST00000081265 Ccer2J3QPU5 274 aa14.07□□□□□ -0.16
Ebf1-201ENSMUST00000081265 AknaQ80VW7 1404 aa14.06□□□□□ -0.16
Ebf1-201ENSMUST00000081265 Urb2E9Q7L1 1524 aaKnown RBP14.06□□□□□ -0.16
Ebf1-201ENSMUST00000081265 Hdac5Q9Z2V6 1113 aa14.06□□□□□ -0.16
Ebf1-201ENSMUST00000081265 NrkQ9R0G8 1455 aa14.05□□□□□ -0.16
Ebf1-201ENSMUST00000081265 Lamc3Q9R0B6 1581 aa14.05□□□□□ -0.16
Ebf1-201ENSMUST00000081265 Duox2A2AQ99 1517 aa14.04□□□□□ -0.16
Ebf1-201ENSMUST00000081265 Pabpn1Q8CCS6 302 aaKnown RBP14.03□□□□□ -0.16
Ebf1-201ENSMUST00000081265 Shroom4Q1W617 1475 aa14.03□□□□□ -0.16
Ebf1-201ENSMUST00000081265 Thoc2B1AZI6 1594 aaKnown RBP14.02□□□□□ -0.16
Ebf1-201ENSMUST00000081265 Kif27Q7M6Z4 1394 aa14.02□□□□□ -0.16
Ebf1-201ENSMUST00000081265 Aebp1Q640N1 1128 aa14□□□□□ -0.17
Ebf1-201ENSMUST00000081265 Top2aQ01320 1528 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms