RNA–Protein interactions for RNA: ENSMUST00000071103.9

Ddx1-201, Transcript of ATP-dependent RNA helicase DDX1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx1, Length 4,842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1-201ENSMUST00000071103 NischQ80TM9 1593 aa17.66■□□□□ 0.42
Ddx1-201ENSMUST00000071103 Gm35339A0A140LHH9 1649 aa17.1■□□□□ 0.33
Ddx1-201ENSMUST00000071103 Abcc9P70170 1546 aa17■□□□□ 0.31
Ddx1-201ENSMUST00000071103 Rhox8Q6VSS7 320 aa16.86■□□□□ 0.29
Ddx1-201ENSMUST00000071103 Abcc8B2RUS7 1588 aa16.68■□□□□ 0.26
Ddx1-201ENSMUST00000071103 Rtl1Q7M732 1744 aa15.91■□□□□ 0.14
Ddx1-201ENSMUST00000071103 Dcaf1Q80TR8 1506 aa15.61■□□□□ 0.09
Ddx1-201ENSMUST00000071103 Ccdc180J3QNE4 1664 aa15.6■□□□□ 0.09
Ddx1-201ENSMUST00000071103 Rb1cc1Q9ESK9 1588 aa15.49■□□□□ 0.07
Ddx1-201ENSMUST00000071103 NacadQ5SWP3 1504 aa15.48■□□□□ 0.07
Ddx1-201ENSMUST00000071103 Ccdc136Q3TVA9 1136 aa15.42■□□□□ 0.06
Ddx1-201ENSMUST00000071103 ScribQ80U72 1612 aa15.42■□□□□ 0.06
Ddx1-201ENSMUST00000071103 Kdm5dQ62240 1548 aa15.36■□□□□ 0.05
Ddx1-201ENSMUST00000071103 Trim41Q5NCC3 630 aa15.32■□□□□ 0.04
Ddx1-201ENSMUST00000071103 Zcchc6Q5BLK4 1491 aaKnown RBP15.31■□□□□ 0.04
Ddx1-201ENSMUST00000071103 Baz1aO88379 1555 aa15.29■□□□□ 0.04
Ddx1-201ENSMUST00000071103 HrcG5E8J6 738 aa15.04■□□□□ -0
Ddx1-201ENSMUST00000071103 Crybg2B7ZCC2 1516 aa15.03■□□□□ -0
Ddx1-201ENSMUST00000071103 Sycp2Q9CUU3 1500 aa15.01□□□□□ -0.01
Ddx1-201ENSMUST00000071103 Esf1Q3V1V3 845 aaKnown RBP15.01□□□□□ -0.01
Ddx1-201ENSMUST00000071103 Cngb1E1AZ71 1325 aa14.99□□□□□ -0.01
Ddx1-201ENSMUST00000071103 Brd4Q9ESU6 1400 aaKnown RBP14.87□□□□□ -0.03
Ddx1-201ENSMUST00000071103 Smarca2Q6DIC0 1577 aa14.77□□□□□ -0.04
Ddx1-201ENSMUST00000071103 Rpgrip1Q9EPQ2 1331 aa14.75□□□□□ -0.05
Ddx1-201ENSMUST00000071103 Ehmt2Q9Z148 1263 aaKnown RBP14.72□□□□□ -0.05
Ddx1-201ENSMUST00000071103 Gab3Q8BSM5 595 aa14.59□□□□□ -0.07
Ddx1-201ENSMUST00000071103 Cep164Q5DU05 1446 aa14.53□□□□□ -0.08
Ddx1-201ENSMUST00000071103 Golga3P55937 1487 aa14.49□□□□□ -0.09
Ddx1-201ENSMUST00000071103 Cecr2E9Q2Z1 1453 aa14.46□□□□□ -0.09
Ddx1-201ENSMUST00000071103 Pds5bQ4VA53 1446 aaKnown RBP14.43□□□□□ -0.1
Ddx1-201ENSMUST00000071103 BicraF8VPZ9 1578 aa14.43□□□□□ -0.1
Ddx1-201ENSMUST00000071103 Npm2Q80W85 207 aa14.43□□□□□ -0.1
Ddx1-201ENSMUST00000071103 Acin1Q9JIX8 1338 aaKnown RBP14.4□□□□□ -0.1
Ddx1-201ENSMUST00000071103 Smarca4Q3TKT4 1613 aaKnown RBP14.4□□□□□ -0.1
Ddx1-201ENSMUST00000071103 CftrP26361 1476 aa14.39□□□□□ -0.11
Ddx1-201ENSMUST00000071103 Synj1Q8CHC4 1574 aa14.37□□□□□ -0.11
Ddx1-201ENSMUST00000071103 Cttnbp2B9EJA2 1648 aa14.34□□□□□ -0.11
Ddx1-201ENSMUST00000071103 Atad2bE9Q166 1460 aaKnown RBP14.31□□□□□ -0.12
Ddx1-201ENSMUST00000071103 Ercc6F8VPZ5 1481 aa14.3□□□□□ -0.12
Ddx1-201ENSMUST00000071103 Chic1Q8CBW7 227 aa14.3□□□□□ -0.12
Ddx1-201ENSMUST00000071103 Myt1lP97500 1187 aa14.25□□□□□ -0.13
Ddx1-201ENSMUST00000071103 Zeb1Q64318 1117 aa14.25□□□□□ -0.13
Ddx1-201ENSMUST00000071103 Rsf1E9PWW9 1441 aaKnown RBP14.22□□□□□ -0.13
Ddx1-201ENSMUST00000071103 Il27Q8K3I6 234 aa14.21□□□□□ -0.14
Ddx1-201ENSMUST00000071103 Iqgap2Q3UQ44 1575 aa14.2□□□□□ -0.14
Ddx1-201ENSMUST00000071103 Fmn1Q05860 1466 aa14.16□□□□□ -0.14
Ddx1-201ENSMUST00000071103 Ccdc88bQ4QRL3 1481 aa14.12□□□□□ -0.15
Ddx1-201ENSMUST00000071103 Pcgf6Q99NA9 353 aa14.11□□□□□ -0.15
Ddx1-201ENSMUST00000071103 Npm1Q61937 292 aaKnown RBP14.08□□□□□ -0.16
Ddx1-201ENSMUST00000071103 Kif15Q6P9L6 1387 aa14.05□□□□□ -0.16
Ddx1-201ENSMUST00000071103 Ubl4bQ9CQ84 188 aa14.04□□□□□ -0.16
Ddx1-201ENSMUST00000071103 Top2bQ64511 1612 aa14□□□□□ -0.17
Ddx1-201ENSMUST00000071103 Ccdc18Q640L5 1455 aa13.98□□□□□ -0.17
Ddx1-201ENSMUST00000071103 NefmP08553 848 aa13.97□□□□□ -0.17
Ddx1-201ENSMUST00000071103 UbtfP25976 765 aaKnown RBP13.94□□□□□ -0.18
Ddx1-201ENSMUST00000071103 Phldb1Q6PDH0 1371 aaKnown RBP13.94□□□□□ -0.18
Ddx1-201ENSMUST00000071103 Cc2d2aQ8CFW7 1633 aa13.93□□□□□ -0.18
Ddx1-201ENSMUST00000071103 Supt5hO55201 1082 aaKnown RBP13.89□□□□□ -0.19
Ddx1-201ENSMUST00000071103 Wdr62Q3U3T8 1523 aa13.89□□□□□ -0.19
Ddx1-201ENSMUST00000071103 Frmpd1A2AKB4 1549 aa13.89□□□□□ -0.19
Ddx1-201ENSMUST00000071103 Las1lA2BE28 776 aaKnown RBP13.85□□□□□ -0.19
Ddx1-201ENSMUST00000071103 Top2aQ01320 1528 aaKnown RBP13.85□□□□□ -0.19
Ddx1-201ENSMUST00000071103 Clip1Q922J3 1391 aa13.83□□□□□ -0.19
Ddx1-201ENSMUST00000071103 Cep162Q6ZQ06 1403 aa13.82□□□□□ -0.2
Ddx1-201ENSMUST00000071103 Rapgef2Q8CHG7 1496 aa13.82□□□□□ -0.2
Ddx1-201ENSMUST00000071103 Ap3b1Q9Z1T1 1105 aa13.77□□□□□ -0.21
Ddx1-201ENSMUST00000071103 Cux2P70298 1426 aa13.77□□□□□ -0.21
Ddx1-201ENSMUST00000071103 Mier1Q5UAK0 511 aa13.74□□□□□ -0.21
Ddx1-201ENSMUST00000071103 Lamc3Q9R0B6 1581 aa13.73□□□□□ -0.21
Ddx1-201ENSMUST00000071103 Eea1Q8BL66 1411 aa13.69□□□□□ -0.22
Ddx1-201ENSMUST00000071103 Plekhg3Q4VAC9 1341 aa13.69□□□□□ -0.22
Ddx1-201ENSMUST00000071103 Setd5Q5XJV7 1441 aa13.67□□□□□ -0.22
Ddx1-201ENSMUST00000071103 TnnQ80Z71 1560 aa13.65□□□□□ -0.22
Ddx1-201ENSMUST00000071103 NrkQ9R0G8 1455 aa13.63□□□□□ -0.23
Ddx1-201ENSMUST00000071103 Shroom4Q1W617 1475 aa13.63□□□□□ -0.23
Ddx1-201ENSMUST00000071103 LrpprcQ6PB66 1392 aaKnown RBP13.62□□□□□ -0.23
Ddx1-201ENSMUST00000071103 Ube2uB1AUC4 352 aa13.62□□□□□ -0.23
Ddx1-201ENSMUST00000071103 Neurod1Q60867 357 aa13.61□□□□□ -0.23
Ddx1-201ENSMUST00000071103 Wdr66E9Q743 1299 aa13.61□□□□□ -0.23
Ddx1-201ENSMUST00000071103 Camsap1A2AHC3 1581 aa13.61□□□□□ -0.23
Ddx1-201ENSMUST00000071103 Baz1bQ9Z277 1479 aa13.59□□□□□ -0.23
Ddx1-201ENSMUST00000071103 Thoc2B1AZI6 1594 aaKnown RBP13.57□□□□□ -0.24
Ddx1-201ENSMUST00000071103 Grin2bQ01097 1482 aa13.57□□□□□ -0.24
Ddx1-201ENSMUST00000071103 Efcab5A0JP43 1406 aa13.55□□□□□ -0.24
Ddx1-201ENSMUST00000071103 Fam135aQ6NS59 1506 aa13.54□□□□□ -0.24
Ddx1-201ENSMUST00000071103 Map3k1P53349 1493 aa13.54□□□□□ -0.24
Ddx1-201ENSMUST00000071103 Carmil1Q6EDY6 1374 aa13.53□□□□□ -0.24
Ddx1-201ENSMUST00000071103 Fam50aQ9WV03 339 aaKnown RBP13.52□□□□□ -0.24
Ddx1-201ENSMUST00000071103 Lmod2Q3UHZ5 550 aa13.52□□□□□ -0.25
Ddx1-201ENSMUST00000071103 Dhx29Q6PGC1 1365 aaKnown RBP13.52□□□□□ -0.25
Ddx1-201ENSMUST00000071103 Arhgap35Q91YM2 1499 aa13.52□□□□□ -0.25
Ddx1-201ENSMUST00000071103 BlmO88700 1416 aa13.51□□□□□ -0.25
Ddx1-201ENSMUST00000071103 Mrc2Q64449 1479 aa13.49□□□□□ -0.25
Ddx1-201ENSMUST00000071103 PogzQ8BZH4 1409 aaKnown RBP13.48□□□□□ -0.25
Ddx1-201ENSMUST00000071103 TonslQ6NZL6 1363 aa13.47□□□□□ -0.25
Ddx1-201ENSMUST00000071103 Duox2A2AQ99 1517 aa13.45□□□□□ -0.26
Ddx1-201ENSMUST00000071103 Sall2Q9QX96 1004 aa13.45□□□□□ -0.26
Ddx1-201ENSMUST00000071103 PtprkP35822 1457 aa13.45□□□□□ -0.26
Ddx1-201ENSMUST00000071103 Rpap1Q80TE0 1409 aa13.44□□□□□ -0.26
Ddx1-201ENSMUST00000071103 Mroh2bQ7M6Y6 1581 aa13.43□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms