RNA–Protein interactions for RNA: ENSMUST00000070132.6

Col8a2-201, Transcript of Collagen alpha-2(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a2, Length 4,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2-201ENSMUST00000070132 Rhox8Q6VSS7 320 aa27.7■■■□□ 2.02
Col8a2-201ENSMUST00000070132 NischQ80TM9 1593 aa26.21■■□□□ 1.79
Col8a2-201ENSMUST00000070132 Ccdc136Q3TVA9 1136 aa25.23■■□□□ 1.63
Col8a2-201ENSMUST00000070132 Abcc9P70170 1546 aa24.88■■□□□ 1.57
Col8a2-201ENSMUST00000070132 Esf1Q3V1V3 845 aaKnown RBP24.56■■□□□ 1.52
Col8a2-201ENSMUST00000070132 Gm35339A0A140LHH9 1649 aa24.5■■□□□ 1.51
Col8a2-201ENSMUST00000070132 Cngb1E1AZ71 1325 aa24.48■■□□□ 1.51
Col8a2-201ENSMUST00000070132 Ehmt2Q9Z148 1263 aaKnown RBP24.4■■□□□ 1.5
Col8a2-201ENSMUST00000070132 Abcc8B2RUS7 1588 aa24.38■■□□□ 1.49
Col8a2-201ENSMUST00000070132 Gab3Q8BSM5 595 aa24.16■■□□□ 1.46
Col8a2-201ENSMUST00000070132 Trim41Q5NCC3 630 aa24.12■■□□□ 1.45
Col8a2-201ENSMUST00000070132 Zcchc6Q5BLK4 1491 aaKnown RBP23.86■■□□□ 1.41
Col8a2-201ENSMUST00000070132 Zeb1Q64318 1117 aa23.7■■□□□ 1.38
Col8a2-201ENSMUST00000070132 Myt1lP97500 1187 aa23.64■■□□□ 1.37
Col8a2-201ENSMUST00000070132 Npm2Q80W85 207 aa23.62■■□□□ 1.37
Col8a2-201ENSMUST00000070132 Il27Q8K3I6 234 aa23.58■■□□□ 1.36
Col8a2-201ENSMUST00000070132 Ube2uB1AUC4 352 aa22.97■■□□□ 1.27
Col8a2-201ENSMUST00000070132 Rb1cc1Q9ESK9 1588 aa22.97■■□□□ 1.27
Col8a2-201ENSMUST00000070132 UbtfP25976 765 aaKnown RBP22.87■■□□□ 1.25
Col8a2-201ENSMUST00000070132 HrcG5E8J6 738 aa22.85■■□□□ 1.25
Col8a2-201ENSMUST00000070132 NacadQ5SWP3 1504 aa22.84■■□□□ 1.25
Col8a2-201ENSMUST00000070132 Ccdc180J3QNE4 1664 aa22.81■■□□□ 1.24
Col8a2-201ENSMUST00000070132 Ap3b1Q9Z1T1 1105 aa22.79■■□□□ 1.24
Col8a2-201ENSMUST00000070132 Kdm5dQ62240 1548 aa22.7■■□□□ 1.22
Col8a2-201ENSMUST00000070132 Npm1Q61937 292 aaKnown RBP22.61■■□□□ 1.21
Col8a2-201ENSMUST00000070132 Chic1Q8CBW7 227 aa22.6■■□□□ 1.21
Col8a2-201ENSMUST00000070132 Rtl1Q7M732 1744 aa22.57■■□□□ 1.2
Col8a2-201ENSMUST00000070132 Wdr66E9Q743 1299 aa22.56■■□□□ 1.2
Col8a2-201ENSMUST00000070132 Rpgrip1Q9EPQ2 1331 aa22.51■■□□□ 1.19
Col8a2-201ENSMUST00000070132 Dcaf1Q80TR8 1506 aa22.47■■□□□ 1.19
Col8a2-201ENSMUST00000070132 Ubl4bQ9CQ84 188 aa22.46■■□□□ 1.19
Col8a2-201ENSMUST00000070132 Brd4Q9ESU6 1400 aaKnown RBP22.44■■□□□ 1.18
Col8a2-201ENSMUST00000070132 Baz1aO88379 1555 aa22.39■■□□□ 1.18
Col8a2-201ENSMUST00000070132 ScribQ80U72 1612 aa22.37■■□□□ 1.17
Col8a2-201ENSMUST00000070132 Las1lA2BE28 776 aaKnown RBP22.34■■□□□ 1.17
Col8a2-201ENSMUST00000070132 Lmod2Q3UHZ5 550 aa22.26■■□□□ 1.15
Col8a2-201ENSMUST00000070132 Fam50aQ9WV03 339 aaKnown RBP22.25■■□□□ 1.15
Col8a2-201ENSMUST00000070132 Plekhg3Q4VAC9 1341 aa22.2■■□□□ 1.14
Col8a2-201ENSMUST00000070132 Ifnlr1Q8CGK5 535 aa22.18■■□□□ 1.14
Col8a2-201ENSMUST00000070132 Acin1Q9JIX8 1338 aaKnown RBP22.15■■□□□ 1.14
Col8a2-201ENSMUST00000070132 Fkbp15Q6P9Q6 1216 aaKnown RBP22.06■■□□□ 1.12
Col8a2-201ENSMUST00000070132 Sycp2Q9CUU3 1500 aa22.04■■□□□ 1.12
Col8a2-201ENSMUST00000070132 Ppargc1bQ8VHJ7 1014 aa22■■□□□ 1.11
Col8a2-201ENSMUST00000070132 Zbtb7cQ8VCZ7 619 aa21.98■■□□□ 1.11
Col8a2-201ENSMUST00000070132 Kif15Q6P9L6 1387 aa21.94■■□□□ 1.1
Col8a2-201ENSMUST00000070132 Neurod1Q60867 357 aa21.91■■□□□ 1.1
Col8a2-201ENSMUST00000070132 Cecr2E9Q2Z1 1453 aa21.88■■□□□ 1.09
Col8a2-201ENSMUST00000070132 Mier1Q5UAK0 511 aa21.83■■□□□ 1.09
Col8a2-201ENSMUST00000070132 Cep164Q5DU05 1446 aa21.83■■□□□ 1.08
Col8a2-201ENSMUST00000070132 NefmP08553 848 aa21.82■■□□□ 1.08
Col8a2-201ENSMUST00000070132 Golga3P55937 1487 aa21.79■■□□□ 1.08
Col8a2-201ENSMUST00000070132 Ercc6F8VPZ5 1481 aa21.76■■□□□ 1.07
Col8a2-201ENSMUST00000070132 Pelp1Q9DBD5 1123 aaKnown RBP21.76■■□□□ 1.07
Col8a2-201ENSMUST00000070132 Rsf1E9PWW9 1441 aaKnown RBP21.73■■□□□ 1.07
Col8a2-201ENSMUST00000070132 Clip1Q922J3 1391 aa21.71■■□□□ 1.07
Col8a2-201ENSMUST00000070132 Slc24a1Q91WD8 1130 aa21.71■■□□□ 1.07
Col8a2-201ENSMUST00000070132 Pds5bQ4VA53 1446 aaKnown RBP21.68■■□□□ 1.06
Col8a2-201ENSMUST00000070132 Eid3Q3V124 375 aa21.65■■□□□ 1.06
Col8a2-201ENSMUST00000070132 Plppr3Q7TPB0 716 aa21.63■■□□□ 1.05
Col8a2-201ENSMUST00000070132 Hnrnpul2Q00PI9 745 aaKnown RBP21.59■■□□□ 1.05
Col8a2-201ENSMUST00000070132 Ccdc88bQ4QRL3 1481 aa21.58■■□□□ 1.05
Col8a2-201ENSMUST00000070132 NclP09405 707 aaKnown RBP21.54■■□□□ 1.04
Col8a2-201ENSMUST00000070132 CftrP26361 1476 aa21.49■■□□□ 1.03
Col8a2-201ENSMUST00000070132 Chic2Q9D9G3 165 aa21.45■■□□□ 1.02
Col8a2-201ENSMUST00000070132 Zbtb4Q5F293 982 aa21.42■■□□□ 1.02
Col8a2-201ENSMUST00000070132 Smarca2Q6DIC0 1577 aa21.42■■□□□ 1.02
Col8a2-201ENSMUST00000070132 Os9Q8K2C7 672 aa21.41■■□□□ 1.02
Col8a2-201ENSMUST00000070132 Crybg2B7ZCC2 1516 aa21.41■■□□□ 1.02
Col8a2-201ENSMUST00000070132 Ccdc18Q640L5 1455 aa21.38■■□□□ 1.01
Col8a2-201ENSMUST00000070132 Setd5Q5XJV7 1441 aa21.38■■□□□ 1.01
Col8a2-201ENSMUST00000070132 Synj1Q8CHC4 1574 aa21.37■■□□□ 1.01
Col8a2-201ENSMUST00000070132 TonslQ6NZL6 1363 aa21.35■■□□□ 1.01
Col8a2-201ENSMUST00000070132 BlmO88700 1416 aa21.35■■□□□ 1.01
Col8a2-201ENSMUST00000070132 Atad2bE9Q166 1460 aaKnown RBP21.35■■□□□ 1.01
Col8a2-201ENSMUST00000070132 Arhgap27A2AB59 869 aa21.35■■□□□ 1.01
Col8a2-201ENSMUST00000070132 Mapk8ip2Q9ERE9 830 aa21.33■■□□□ 1.01
Col8a2-201ENSMUST00000070132 Ttbk1Q6PCN3 1308 aa21.3■■□□□ 1
Col8a2-201ENSMUST00000070132 Erich6D3Z6S9 713 aa21.29■■□□□ 1
Col8a2-201ENSMUST00000070132 Supt5hO55201 1082 aaKnown RBP21.29■■□□□ 1
Col8a2-201ENSMUST00000070132 Cux2P70298 1426 aa21.28■■□□□ 1
Col8a2-201ENSMUST00000070132 Pcgf6Q99NA9 353 aa21.23■□□□□ 0.99
Col8a2-201ENSMUST00000070132 Smarca4Q3TKT4 1613 aaKnown RBP21.21■□□□□ 0.99
Col8a2-201ENSMUST00000070132 Phldb1Q6PDH0 1371 aaKnown RBP21.19■□□□□ 0.98
Col8a2-201ENSMUST00000070132 Gm13697A2AK42 830 aa21.17■□□□□ 0.98
Col8a2-201ENSMUST00000070132 Fmn1Q05860 1466 aa21.1■□□□□ 0.97
Col8a2-201ENSMUST00000070132 Dnajc5bQ9CQ94 199 aa21.1■□□□□ 0.97
Col8a2-201ENSMUST00000070132 Prdm10Q3UTQ7 1184 aa21.08■□□□□ 0.96
Col8a2-201ENSMUST00000070132 Iqgap2Q3UQ44 1575 aa21.07■□□□□ 0.96
Col8a2-201ENSMUST00000070132 BicraF8VPZ9 1578 aa21.07■□□□□ 0.96
Col8a2-201ENSMUST00000070132 Atp1b4Q99ME6 356 aa21.03■□□□□ 0.96
Col8a2-201ENSMUST00000070132 Eea1Q8BL66 1411 aa21.01■□□□□ 0.95
Col8a2-201ENSMUST00000070132 Cep162Q6ZQ06 1403 aa20.99■□□□□ 0.95
Col8a2-201ENSMUST00000070132 Arid3cA6PWV5 409 aa20.93■□□□□ 0.94
Col8a2-201ENSMUST00000070132 AknaQ80VW7 1404 aa20.9■□□□□ 0.94
Col8a2-201ENSMUST00000070132 Cdk11bP24788 784 aaKnown RBP20.9■□□□□ 0.94
Col8a2-201ENSMUST00000070132 Cttnbp2B9EJA2 1648 aa20.9■□□□□ 0.94
Col8a2-201ENSMUST00000070132 Nop58Q6DFW4 536 aaKnown RBP20.9■□□□□ 0.94
Col8a2-201ENSMUST00000070132 Rapgef2Q8CHG7 1496 aa20.89■□□□□ 0.93
Col8a2-201ENSMUST00000070132 Baz1bQ9Z277 1479 aa20.88■□□□□ 0.93
Col8a2-201ENSMUST00000070132 LrpprcQ6PB66 1392 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms