RNA–Protein interactions for RNA: ENSMUST00000069174.5

Trim23-202, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 4,258 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-202ENSMUST00000069174 NischQ80TM9 1593 aa10.5□□□□□ -0.73
Trim23-202ENSMUST00000069174 Gm35339A0A140LHH9 1649 aa10.34□□□□□ -0.75
Trim23-202ENSMUST00000069174 Abcc9P70170 1546 aa10.09□□□□□ -0.79
Trim23-202ENSMUST00000069174 Abcc8B2RUS7 1588 aa10.02□□□□□ -0.81
Trim23-202ENSMUST00000069174 Rhox8Q6VSS7 320 aa9.64□□□□□ -0.87
Trim23-202ENSMUST00000069174 ScribQ80U72 1612 aa9.51□□□□□ -0.89
Trim23-202ENSMUST00000069174 NacadQ5SWP3 1504 aa9.38□□□□□ -0.91
Trim23-202ENSMUST00000069174 Kdm5dQ62240 1548 aa9.34□□□□□ -0.91
Trim23-202ENSMUST00000069174 Dcaf1Q80TR8 1506 aa9.23□□□□□ -0.93
Trim23-202ENSMUST00000069174 Rb1cc1Q9ESK9 1588 aa9.18□□□□□ -0.94
Trim23-202ENSMUST00000069174 Sycp2Q9CUU3 1500 aa9.14□□□□□ -0.95
Trim23-202ENSMUST00000069174 Zcchc6Q5BLK4 1491 aaKnown RBP9.07□□□□□ -0.96
Trim23-202ENSMUST00000069174 Baz1aO88379 1555 aa9.03□□□□□ -0.96
Trim23-202ENSMUST00000069174 Ccdc136Q3TVA9 1136 aa8.91□□□□□ -0.98
Trim23-202ENSMUST00000069174 BicraF8VPZ9 1578 aa8.9□□□□□ -0.98
Trim23-202ENSMUST00000069174 Ccdc180J3QNE4 1664 aa8.89□□□□□ -0.99
Trim23-202ENSMUST00000069174 Crybg2B7ZCC2 1516 aa8.89□□□□□ -0.99
Trim23-202ENSMUST00000069174 Pds5bQ4VA53 1446 aaKnown RBP8.84□□□□□ -1
Trim23-202ENSMUST00000069174 Esf1Q3V1V3 845 aaKnown RBP8.79□□□□□ -1
Trim23-202ENSMUST00000069174 Rtl1Q7M732 1744 aa8.78□□□□□ -1
Trim23-202ENSMUST00000069174 Trim41Q5NCC3 630 aa8.75□□□□□ -1.01
Trim23-202ENSMUST00000069174 Ercc6F8VPZ5 1481 aa8.73□□□□□ -1.01
Trim23-202ENSMUST00000069174 Atad2bE9Q166 1460 aaKnown RBP8.73□□□□□ -1.01
Trim23-202ENSMUST00000069174 Smarca2Q6DIC0 1577 aa8.72□□□□□ -1.01
Trim23-202ENSMUST00000069174 Smarca4Q3TKT4 1613 aaKnown RBP8.69□□□□□ -1.02
Trim23-202ENSMUST00000069174 Cecr2E9Q2Z1 1453 aa8.68□□□□□ -1.02
Trim23-202ENSMUST00000069174 Brd4Q9ESU6 1400 aaKnown RBP8.68□□□□□ -1.02
Trim23-202ENSMUST00000069174 Cngb1E1AZ71 1325 aa8.64□□□□□ -1.03
Trim23-202ENSMUST00000069174 Iqgap2Q3UQ44 1575 aa8.63□□□□□ -1.03
Trim23-202ENSMUST00000069174 Dnajc5bQ9CQ94 199 aa8.6□□□□□ -1.03
Trim23-202ENSMUST00000069174 Ubl4bQ9CQ84 188 aa8.58□□□□□ -1.04
Trim23-202ENSMUST00000069174 DiexfQ8BTT6 772 aaKnown RBP8.57□□□□□ -1.04
Trim23-202ENSMUST00000069174 CftrP26361 1476 aa8.54□□□□□ -1.04
Trim23-202ENSMUST00000069174 Plppr3Q7TPB0 716 aa8.53□□□□□ -1.04
Trim23-202ENSMUST00000069174 Thoc2B1AZI6 1594 aaKnown RBP8.53□□□□□ -1.04
Trim23-202ENSMUST00000069174 Phldb1Q6PDH0 1371 aaKnown RBP8.52□□□□□ -1.04
Trim23-202ENSMUST00000069174 Synj1Q8CHC4 1574 aa8.52□□□□□ -1.05
Trim23-202ENSMUST00000069174 Cttnbp2B9EJA2 1648 aa8.52□□□□□ -1.05
Trim23-202ENSMUST00000069174 Cc2d2aQ8CFW7 1633 aa8.51□□□□□ -1.05
Trim23-202ENSMUST00000069174 Frmpd1A2AKB4 1549 aa8.49□□□□□ -1.05
Trim23-202ENSMUST00000069174 Wdr62Q3U3T8 1523 aa8.49□□□□□ -1.05
Trim23-202ENSMUST00000069174 Il27Q8K3I6 234 aa8.46□□□□□ -1.05
Trim23-202ENSMUST00000069174 Rsf1E9PWW9 1441 aaKnown RBP8.44□□□□□ -1.06
Trim23-202ENSMUST00000069174 Npm1Q61937 292 aaKnown RBP8.43□□□□□ -1.06
Trim23-202ENSMUST00000069174 Kif15Q6P9L6 1387 aa8.42□□□□□ -1.06
Trim23-202ENSMUST00000069174 Fam135aQ6NS59 1506 aa8.41□□□□□ -1.06
Trim23-202ENSMUST00000069174 Golga3P55937 1487 aa8.38□□□□□ -1.07
Trim23-202ENSMUST00000069174 Cux2P70298 1426 aa8.34□□□□□ -1.07
Trim23-202ENSMUST00000069174 Mrc2Q64449 1479 aa8.33□□□□□ -1.08
Trim23-202ENSMUST00000069174 Baz1bQ9Z277 1479 aa8.33□□□□□ -1.08
Trim23-202ENSMUST00000069174 Zeb1Q64318 1117 aa8.31□□□□□ -1.08
Trim23-202ENSMUST00000069174 Cep164Q5DU05 1446 aa8.3□□□□□ -1.08
Trim23-202ENSMUST00000069174 Ccdc18Q640L5 1455 aa8.3□□□□□ -1.08
Trim23-202ENSMUST00000069174 Npm2Q80W85 207 aa8.29□□□□□ -1.08
Trim23-202ENSMUST00000069174 Gab3Q8BSM5 595 aa8.26□□□□□ -1.09
Trim23-202ENSMUST00000069174 Unc13aQ4KUS2 1712 aa8.25□□□□□ -1.09
Trim23-202ENSMUST00000069174 Fmn1Q05860 1466 aa8.25□□□□□ -1.09
Trim23-202ENSMUST00000069174 PrkcshO08795 521 aa8.23□□□□□ -1.09
Trim23-202ENSMUST00000069174 Ttbk1Q6PCN3 1308 aa8.22□□□□□ -1.09
Trim23-202ENSMUST00000069174 Lamc3Q9R0B6 1581 aa8.21□□□□□ -1.09
Trim23-202ENSMUST00000069174 HrcG5E8J6 738 aa8.21□□□□□ -1.1
Trim23-202ENSMUST00000069174 Bcl11aQ9QYE3 773 aa8.2□□□□□ -1.1
Trim23-202ENSMUST00000069174 Chic1Q8CBW7 227 aa8.2□□□□□ -1.1
Trim23-202ENSMUST00000069174 Top2bQ64511 1612 aa8.19□□□□□ -1.1
Trim23-202ENSMUST00000069174 Pcgf6Q99NA9 353 aa8.18□□□□□ -1.1
Trim23-202ENSMUST00000069174 LrpprcQ6PB66 1392 aaKnown RBP8.16□□□□□ -1.1
Trim23-202ENSMUST00000069174 Dhx29Q6PGC1 1365 aaKnown RBP8.16□□□□□ -1.1
Trim23-202ENSMUST00000069174 Ccdc88bQ4QRL3 1481 aa8.15□□□□□ -1.1
Trim23-202ENSMUST00000069174 Myt1lP97500 1187 aa8.14□□□□□ -1.11
Trim23-202ENSMUST00000069174 Camsap1A2AHC3 1581 aa8.12□□□□□ -1.11
Trim23-202ENSMUST00000069174 Kif21aQ9QXL2 1672 aa8.11□□□□□ -1.11
Trim23-202ENSMUST00000069174 Urb2E9Q7L1 1524 aaKnown RBP8.1□□□□□ -1.11
Trim23-202ENSMUST00000069174 TnnQ80Z71 1560 aa8.1□□□□□ -1.11
Trim23-202ENSMUST00000069174 Amer1Q7TS75 1132 aa8.1□□□□□ -1.11
Trim23-202ENSMUST00000069174 Ube2uB1AUC4 352 aa8.08□□□□□ -1.12
Trim23-202ENSMUST00000069174 Pelp1Q9DBD5 1123 aaKnown RBP8.08□□□□□ -1.12
Trim23-202ENSMUST00000069174 Crocc2F6XLV1 1638 aa8.07□□□□□ -1.12
Trim23-202ENSMUST00000069174 PogzQ8BZH4 1409 aaKnown RBP8.07□□□□□ -1.12
Trim23-202ENSMUST00000069174 Plb1Q3TTY0 1478 aa8.07□□□□□ -1.12
Trim23-202ENSMUST00000069174 Lrriq1Q0P5X1 1673 aa8.06□□□□□ -1.12
Trim23-202ENSMUST00000069174 Duox2A2AQ99 1517 aa8.05□□□□□ -1.12
Trim23-202ENSMUST00000069174 Grin2bQ01097 1482 aa8.05□□□□□ -1.12
Trim23-202ENSMUST00000069174 Top2aQ01320 1528 aaKnown RBP8.04□□□□□ -1.12
Trim23-202ENSMUST00000069174 Efcab5A0JP43 1406 aa8.02□□□□□ -1.13
Trim23-202ENSMUST00000069174 Ift140E9PY46 1464 aa8.02□□□□□ -1.13
Trim23-202ENSMUST00000069174 NrkQ9R0G8 1455 aa7.99□□□□□ -1.13
Trim23-202ENSMUST00000069174 Shroom4Q1W617 1475 aa7.98□□□□□ -1.13
Trim23-202ENSMUST00000069174 Rad54l2Q99NG0 1466 aa7.97□□□□□ -1.13
Trim23-202ENSMUST00000069174 Pabpn1Q8CCS6 302 aaKnown RBP7.96□□□□□ -1.14
Trim23-202ENSMUST00000069174 Eif4g3Q80XI3 1579 aaKnown RBP7.95□□□□□ -1.14
Trim23-202ENSMUST00000069174 Arhgap27A2AB59 869 aa7.94□□□□□ -1.14
Trim23-202ENSMUST00000069174 Cc2d2bA0A286YDU8 1405 aa7.94□□□□□ -1.14
Trim23-202ENSMUST00000069174 PtprkP35822 1457 aa7.94□□□□□ -1.14
Trim23-202ENSMUST00000069174 AknaQ80VW7 1404 aa7.93□□□□□ -1.14
Trim23-202ENSMUST00000069174 Samd9lQ69Z37 1561 aa7.92□□□□□ -1.14
Trim23-202ENSMUST00000069174 Ap3b1Q9Z1T1 1105 aa7.92□□□□□ -1.14
Trim23-202ENSMUST00000069174 Gm38655A0A286YDK6 273 aa7.92□□□□□ -1.14
Trim23-202ENSMUST00000069174 Clip1Q922J3 1391 aa7.91□□□□□ -1.14
Trim23-202ENSMUST00000069174 Rapgef2Q8CHG7 1496 aa7.91□□□□□ -1.14
Trim23-202ENSMUST00000069174 CatipB9EKE5 520 aa7.91□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms