RNA–Protein interactions for RNA: ENSMUST00000065534.9

Def8-202, Transcript of Differentially expressed in FDCP 8, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Def8, Length 3,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Def8-202ENSMUST00000065534 NischQ80TM9 1593 aa18.29■□□□□ 0.52
Def8-202ENSMUST00000065534 Gm35339A0A140LHH9 1649 aa18.11■□□□□ 0.49
Def8-202ENSMUST00000065534 Abcc9P70170 1546 aa17.81■□□□□ 0.44
Def8-202ENSMUST00000065534 Abcc8B2RUS7 1588 aa17.41■□□□□ 0.38
Def8-202ENSMUST00000065534 Rtl1Q7M732 1744 aa16.75■□□□□ 0.27
Def8-202ENSMUST00000065534 Rhox8Q6VSS7 320 aa16.72■□□□□ 0.27
Def8-202ENSMUST00000065534 Ccdc180J3QNE4 1664 aa16.4■□□□□ 0.22
Def8-202ENSMUST00000065534 Dcaf1Q80TR8 1506 aa16.27■□□□□ 0.2
Def8-202ENSMUST00000065534 ScribQ80U72 1612 aa16.25■□□□□ 0.19
Def8-202ENSMUST00000065534 Zcchc6Q5BLK4 1491 aaKnown RBP16.18■□□□□ 0.18
Def8-202ENSMUST00000065534 Rb1cc1Q9ESK9 1588 aa16.02■□□□□ 0.16
Def8-202ENSMUST00000065534 Kdm5dQ62240 1548 aa15.9■□□□□ 0.14
Def8-202ENSMUST00000065534 Baz1aO88379 1555 aa15.85■□□□□ 0.13
Def8-202ENSMUST00000065534 NacadQ5SWP3 1504 aa15.76■□□□□ 0.11
Def8-202ENSMUST00000065534 Crybg2B7ZCC2 1516 aa15.6■□□□□ 0.09
Def8-202ENSMUST00000065534 HrcG5E8J6 738 aa15.59■□□□□ 0.09
Def8-202ENSMUST00000065534 Ccdc136Q3TVA9 1136 aa15.55■□□□□ 0.08
Def8-202ENSMUST00000065534 Smarca2Q6DIC0 1577 aa15.53■□□□□ 0.08
Def8-202ENSMUST00000065534 Sycp2Q9CUU3 1500 aa15.44■□□□□ 0.06
Def8-202ENSMUST00000065534 Rpgrip1Q9EPQ2 1331 aa15.36■□□□□ 0.05
Def8-202ENSMUST00000065534 Trim41Q5NCC3 630 aa15.26■□□□□ 0.03
Def8-202ENSMUST00000065534 Acin1Q9JIX8 1338 aaKnown RBP15.19■□□□□ 0.02
Def8-202ENSMUST00000065534 Cep164Q5DU05 1446 aa15.15■□□□□ 0.02
Def8-202ENSMUST00000065534 BicraF8VPZ9 1578 aa15.13■□□□□ 0.01
Def8-202ENSMUST00000065534 Cecr2E9Q2Z1 1453 aa15.11■□□□□ 0.01
Def8-202ENSMUST00000065534 Brd4Q9ESU6 1400 aaKnown RBP15.06■□□□□ 0
Def8-202ENSMUST00000065534 Ehmt2Q9Z148 1263 aaKnown RBP15.03■□□□□ -0
Def8-202ENSMUST00000065534 Synj1Q8CHC4 1574 aa15□□□□□ -0.01
Def8-202ENSMUST00000065534 Rsf1E9PWW9 1441 aaKnown RBP14.97□□□□□ -0.01
Def8-202ENSMUST00000065534 Golga3P55937 1487 aa14.93□□□□□ -0.02
Def8-202ENSMUST00000065534 Chic1Q8CBW7 227 aa14.9□□□□□ -0.02
Def8-202ENSMUST00000065534 CftrP26361 1476 aa14.89□□□□□ -0.03
Def8-202ENSMUST00000065534 Ccdc88bQ4QRL3 1481 aa14.87□□□□□ -0.03
Def8-202ENSMUST00000065534 Top2bQ64511 1612 aa14.85□□□□□ -0.03
Def8-202ENSMUST00000065534 Cngb1E1AZ71 1325 aa14.84□□□□□ -0.03
Def8-202ENSMUST00000065534 Cttnbp2B9EJA2 1648 aa14.82□□□□□ -0.04
Def8-202ENSMUST00000065534 Smarca4Q3TKT4 1613 aaKnown RBP14.76□□□□□ -0.05
Def8-202ENSMUST00000065534 Cc2d2aQ8CFW7 1633 aa14.66□□□□□ -0.06
Def8-202ENSMUST00000065534 Gab3Q8BSM5 595 aa14.66□□□□□ -0.06
Def8-202ENSMUST00000065534 Esf1Q3V1V3 845 aaKnown RBP14.61□□□□□ -0.07
Def8-202ENSMUST00000065534 Iqgap2Q3UQ44 1575 aa14.56□□□□□ -0.08
Def8-202ENSMUST00000065534 Fmn1Q05860 1466 aa14.54□□□□□ -0.08
Def8-202ENSMUST00000065534 Top2aQ01320 1528 aaKnown RBP14.52□□□□□ -0.08
Def8-202ENSMUST00000065534 Pcgf6Q99NA9 353 aa14.52□□□□□ -0.09
Def8-202ENSMUST00000065534 Rapgef2Q8CHG7 1496 aa14.52□□□□□ -0.09
Def8-202ENSMUST00000065534 Atad2bE9Q166 1460 aaKnown RBP14.45□□□□□ -0.1
Def8-202ENSMUST00000065534 TnnQ80Z71 1560 aa14.38□□□□□ -0.11
Def8-202ENSMUST00000065534 Mier1Q5UAK0 511 aa14.36□□□□□ -0.11
Def8-202ENSMUST00000065534 Cep162Q6ZQ06 1403 aa14.35□□□□□ -0.11
Def8-202ENSMUST00000065534 Eif4g1Q6NZJ6 1600 aaKnown RBP14.35□□□□□ -0.11
Def8-202ENSMUST00000065534 Pds5bQ4VA53 1446 aaKnown RBP14.35□□□□□ -0.11
Def8-202ENSMUST00000065534 Supt5hO55201 1082 aaKnown RBP14.3□□□□□ -0.12
Def8-202ENSMUST00000065534 NefmP08553 848 aa14.3□□□□□ -0.12
Def8-202ENSMUST00000065534 Wdr62Q3U3T8 1523 aa14.27□□□□□ -0.12
Def8-202ENSMUST00000065534 Frmpd1A2AKB4 1549 aa14.27□□□□□ -0.13
Def8-202ENSMUST00000065534 Lamc3Q9R0B6 1581 aa14.22□□□□□ -0.13
Def8-202ENSMUST00000065534 Unc13aQ4KUS2 1712 aa14.2□□□□□ -0.14
Def8-202ENSMUST00000065534 NrkQ9R0G8 1455 aa14.15□□□□□ -0.14
Def8-202ENSMUST00000065534 Arhgap35Q91YM2 1499 aa14.14□□□□□ -0.15
Def8-202ENSMUST00000065534 PtprkP35822 1457 aa14.13□□□□□ -0.15
Def8-202ENSMUST00000065534 UbtfP25976 765 aaKnown RBP14.12□□□□□ -0.15
Def8-202ENSMUST00000065534 Myt1lP97500 1187 aa14.11□□□□□ -0.15
Def8-202ENSMUST00000065534 Zeb1Q64318 1117 aa14.11□□□□□ -0.15
Def8-202ENSMUST00000065534 Npm2Q80W85 207 aa14.09□□□□□ -0.15
Def8-202ENSMUST00000065534 Camsap1A2AHC3 1581 aa14.08□□□□□ -0.15
Def8-202ENSMUST00000065534 Clip1Q922J3 1391 aa14.07□□□□□ -0.16
Def8-202ENSMUST00000065534 Ercc6F8VPZ5 1481 aa14.06□□□□□ -0.16
Def8-202ENSMUST00000065534 Shroom4Q1W617 1475 aa14.05□□□□□ -0.16
Def8-202ENSMUST00000065534 Kif15Q6P9L6 1387 aa14.04□□□□□ -0.16
Def8-202ENSMUST00000065534 Ncapd3Q6ZQK0 1506 aa14.02□□□□□ -0.17
Def8-202ENSMUST00000065534 Map3k1P53349 1493 aa14.02□□□□□ -0.17
Def8-202ENSMUST00000065534 Arap1Q4LDD4 1452 aa14□□□□□ -0.17
Def8-202ENSMUST00000065534 Sall2Q9QX96 1004 aa13.99□□□□□ -0.17
Def8-202ENSMUST00000065534 Grin2bQ01097 1482 aa13.98□□□□□ -0.17
Def8-202ENSMUST00000065534 Arhgef5E9Q7D5 1581 aa13.96□□□□□ -0.17
Def8-202ENSMUST00000065534 Eea1Q8BL66 1411 aa13.96□□□□□ -0.17
Def8-202ENSMUST00000065534 Plekhg3Q4VAC9 1341 aa13.95□□□□□ -0.18
Def8-202ENSMUST00000065534 Thoc2B1AZI6 1594 aaKnown RBP13.94□□□□□ -0.18
Def8-202ENSMUST00000065534 Ccdc18Q640L5 1455 aa13.93□□□□□ -0.18
Def8-202ENSMUST00000065534 Mroh2bQ7M6Y6 1581 aa13.93□□□□□ -0.18
Def8-202ENSMUST00000065534 Erich3F6QRE9 1637 aa13.92□□□□□ -0.18
Def8-202ENSMUST00000065534 Neurod1Q60867 357 aa13.9□□□□□ -0.18
Def8-202ENSMUST00000065534 Il27Q8K3I6 234 aa13.9□□□□□ -0.18
Def8-202ENSMUST00000065534 Kdm5bQ80Y84 1544 aa13.89□□□□□ -0.19
Def8-202ENSMUST00000065534 Aebp2Q9Z248 504 aaKnown RBP13.88□□□□□ -0.19
Def8-202ENSMUST00000065534 AqrQ8CFQ3 1481 aaKnown RBP13.88□□□□□ -0.19
Def8-202ENSMUST00000065534 Phldb1Q6PDH0 1371 aaKnown RBP13.88□□□□□ -0.19
Def8-202ENSMUST00000065534 Ankrd26Q811D2 1581 aa13.88□□□□□ -0.19
Def8-202ENSMUST00000065534 Setd5Q5XJV7 1441 aa13.87□□□□□ -0.19
Def8-202ENSMUST00000065534 Tiam1Q60610 1591 aa13.87□□□□□ -0.19
Def8-202ENSMUST00000065534 Las1lA2BE28 776 aaKnown RBP13.85□□□□□ -0.19
Def8-202ENSMUST00000065534 Baz1bQ9Z277 1479 aa13.84□□□□□ -0.19
Def8-202ENSMUST00000065534 TchhA0A0B4J1F9 1599 aa13.82□□□□□ -0.2
Def8-202ENSMUST00000065534 Cux2P70298 1426 aa13.81□□□□□ -0.2
Def8-202ENSMUST00000065534 Naip1Q9QWK5 1403 aa13.81□□□□□ -0.2
Def8-202ENSMUST00000065534 Lmo7E9PYF4 1699 aaKnown RBP13.8□□□□□ -0.2
Def8-202ENSMUST00000065534 Fam135aQ6NS59 1506 aa13.79□□□□□ -0.2
Def8-202ENSMUST00000065534 TonslQ6NZL6 1363 aa13.79□□□□□ -0.2
Def8-202ENSMUST00000065534 Pcf11G3X9Z4 1553 aa13.79□□□□□ -0.2
Def8-202ENSMUST00000065534 Efcab5A0JP43 1406 aa13.79□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms