RNA–Protein interactions for RNA: ENSMUST00000057178.10

Nkx2-3-201, Transcript of Homeobox protein Nkx-2.3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx2-3, Length 2,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3-201ENSMUST00000057178 NischQ80TM9 1593 aa37.86■■■■□ 3.65
Nkx2-3-201ENSMUST00000057178 Gm35339A0A140LHH9 1649 aa37.83■■■■□ 3.65
Nkx2-3-201ENSMUST00000057178 Abcc9P70170 1546 aa36.75■■■■□ 3.47
Nkx2-3-201ENSMUST00000057178 Abcc8B2RUS7 1588 aa36.29■■■■□ 3.4
Nkx2-3-201ENSMUST00000057178 Rhox8Q6VSS7 320 aa34.52■■■■□ 3.12
Nkx2-3-201ENSMUST00000057178 ScribQ80U72 1612 aa34.38■■■■□ 3.09
Nkx2-3-201ENSMUST00000057178 Rtl1Q7M732 1744 aa33.75■■■□□ 2.99
Nkx2-3-201ENSMUST00000057178 Dcaf1Q80TR8 1506 aa33.68■■■□□ 2.98
Nkx2-3-201ENSMUST00000057178 Kdm5dQ62240 1548 aa33.47■■■□□ 2.95
Nkx2-3-201ENSMUST00000057178 NacadQ5SWP3 1504 aa33.35■■■□□ 2.93
Nkx2-3-201ENSMUST00000057178 Ccdc180J3QNE4 1664 aa33.11■■■□□ 2.89
Nkx2-3-201ENSMUST00000057178 Rb1cc1Q9ESK9 1588 aa33.08■■■□□ 2.89
Nkx2-3-201ENSMUST00000057178 Baz1aO88379 1555 aa32.68■■■□□ 2.82
Nkx2-3-201ENSMUST00000057178 Sycp2Q9CUU3 1500 aa32.68■■■□□ 2.82
Nkx2-3-201ENSMUST00000057178 Zcchc6Q5BLK4 1491 aaKnown RBP32.61■■■□□ 2.81
Nkx2-3-201ENSMUST00000057178 Crybg2B7ZCC2 1516 aa32.35■■■□□ 2.77
Nkx2-3-201ENSMUST00000057178 BicraF8VPZ9 1578 aa32.1■■■□□ 2.73
Nkx2-3-201ENSMUST00000057178 Rpgrip1Q9EPQ2 1331 aa32.07■■■□□ 2.72
Nkx2-3-201ENSMUST00000057178 Ccdc136Q3TVA9 1136 aa32.05■■■□□ 2.72
Nkx2-3-201ENSMUST00000057178 Smarca2Q6DIC0 1577 aa31.9■■■□□ 2.7
Nkx2-3-201ENSMUST00000057178 HrcG5E8J6 738 aa31.52■■■□□ 2.64
Nkx2-3-201ENSMUST00000057178 Trim41Q5NCC3 630 aa31.48■■■□□ 2.63
Nkx2-3-201ENSMUST00000057178 Cecr2E9Q2Z1 1453 aa31.38■■■□□ 2.61
Nkx2-3-201ENSMUST00000057178 Acin1Q9JIX8 1338 aaKnown RBP31.29■■■□□ 2.6
Nkx2-3-201ENSMUST00000057178 Brd4Q9ESU6 1400 aaKnown RBP31.13■■■□□ 2.57
Nkx2-3-201ENSMUST00000057178 Smarca4Q3TKT4 1613 aaKnown RBP31.01■■■□□ 2.56
Nkx2-3-201ENSMUST00000057178 Synj1Q8CHC4 1574 aa30.89■■■□□ 2.54
Nkx2-3-201ENSMUST00000057178 Pds5bQ4VA53 1446 aaKnown RBP30.85■■■□□ 2.53
Nkx2-3-201ENSMUST00000057178 Atad2bE9Q166 1460 aaKnown RBP30.82■■■□□ 2.52
Nkx2-3-201ENSMUST00000057178 CftrP26361 1476 aa30.81■■■□□ 2.52
Nkx2-3-201ENSMUST00000057178 Cep164Q5DU05 1446 aa30.72■■■□□ 2.51
Nkx2-3-201ENSMUST00000057178 Cngb1E1AZ71 1325 aa30.71■■■□□ 2.51
Nkx2-3-201ENSMUST00000057178 Iqgap2Q3UQ44 1575 aa30.71■■■□□ 2.51
Nkx2-3-201ENSMUST00000057178 Cttnbp2B9EJA2 1648 aa30.7■■■□□ 2.5
Nkx2-3-201ENSMUST00000057178 Golga3P55937 1487 aa30.66■■■□□ 2.5
Nkx2-3-201ENSMUST00000057178 Ehmt2Q9Z148 1263 aaKnown RBP30.56■■■□□ 2.48
Nkx2-3-201ENSMUST00000057178 Rsf1E9PWW9 1441 aaKnown RBP30.49■■■□□ 2.47
Nkx2-3-201ENSMUST00000057178 Esf1Q3V1V3 845 aaKnown RBP30.49■■■□□ 2.47
Nkx2-3-201ENSMUST00000057178 Chic1Q8CBW7 227 aa30.43■■■□□ 2.46
Nkx2-3-201ENSMUST00000057178 Top2bQ64511 1612 aa30.37■■■□□ 2.45
Nkx2-3-201ENSMUST00000057178 Ccdc88bQ4QRL3 1481 aa30.36■■■□□ 2.45
Nkx2-3-201ENSMUST00000057178 Wdr62Q3U3T8 1523 aa30.26■■■□□ 2.44
Nkx2-3-201ENSMUST00000057178 Frmpd1A2AKB4 1549 aa30.26■■■□□ 2.43
Nkx2-3-201ENSMUST00000057178 Thoc2B1AZI6 1594 aaKnown RBP30.22■■■□□ 2.43
Nkx2-3-201ENSMUST00000057178 Ercc6F8VPZ5 1481 aa30.22■■■□□ 2.43
Nkx2-3-201ENSMUST00000057178 Pcgf6Q99NA9 353 aa30.13■■■□□ 2.41
Nkx2-3-201ENSMUST00000057178 Gab3Q8BSM5 595 aa30.09■■■□□ 2.41
Nkx2-3-201ENSMUST00000057178 Cc2d2aQ8CFW7 1633 aa30.07■■■□□ 2.4
Nkx2-3-201ENSMUST00000057178 Fmn1Q05860 1466 aa29.94■■■□□ 2.38
Nkx2-3-201ENSMUST00000057178 Unc13aQ4KUS2 1712 aa29.93■■■□□ 2.38
Nkx2-3-201ENSMUST00000057178 Phldb1Q6PDH0 1371 aaKnown RBP29.77■■■□□ 2.36
Nkx2-3-201ENSMUST00000057178 Fam135aQ6NS59 1506 aa29.74■■■□□ 2.35
Nkx2-3-201ENSMUST00000057178 Top2aQ01320 1528 aaKnown RBP29.72■■■□□ 2.35
Nkx2-3-201ENSMUST00000057178 Dnajc5bQ9CQ94 199 aa29.66■■■□□ 2.34
Nkx2-3-201ENSMUST00000057178 TnnQ80Z71 1560 aa29.64■■■□□ 2.34
Nkx2-3-201ENSMUST00000057178 Lamc3Q9R0B6 1581 aa29.63■■■□□ 2.33
Nkx2-3-201ENSMUST00000057178 Rapgef2Q8CHG7 1496 aa29.56■■■□□ 2.32
Nkx2-3-201ENSMUST00000057178 Kif15Q6P9L6 1387 aa29.53■■■□□ 2.32
Nkx2-3-201ENSMUST00000057178 Supt5hO55201 1082 aaKnown RBP29.48■■■□□ 2.31
Nkx2-3-201ENSMUST00000057178 Ubl4bQ9CQ84 188 aa29.48■■■□□ 2.31
Nkx2-3-201ENSMUST00000057178 Cep162Q6ZQ06 1403 aa29.32■■■□□ 2.28
Nkx2-3-201ENSMUST00000057178 Baz1bQ9Z277 1479 aa29.26■■■□□ 2.27
Nkx2-3-201ENSMUST00000057178 Cux2P70298 1426 aa29.26■■■□□ 2.27
Nkx2-3-201ENSMUST00000057178 NefmP08553 848 aa29.24■■■□□ 2.27
Nkx2-3-201ENSMUST00000057178 Camsap1A2AHC3 1581 aa29.24■■■□□ 2.27
Nkx2-3-201ENSMUST00000057178 Npm2Q80W85 207 aa29.23■■■□□ 2.27
Nkx2-3-201ENSMUST00000057178 Myt1lP97500 1187 aa29.14■■■□□ 2.25
Nkx2-3-201ENSMUST00000057178 Ccdc18Q640L5 1455 aa29.13■■■□□ 2.25
Nkx2-3-201ENSMUST00000057178 Eif4g1Q6NZJ6 1600 aaKnown RBP29.13■■■□□ 2.25
Nkx2-3-201ENSMUST00000057178 Il27Q8K3I6 234 aa29.11■■■□□ 2.25
Nkx2-3-201ENSMUST00000057178 Mrc2Q64449 1479 aa29.05■■■□□ 2.24
Nkx2-3-201ENSMUST00000057178 Mier1Q5UAK0 511 aa29.03■■■□□ 2.24
Nkx2-3-201ENSMUST00000057178 PtprkP35822 1457 aa29.02■■■□□ 2.24
Nkx2-3-201ENSMUST00000057178 NrkQ9R0G8 1455 aa29■■■□□ 2.23
Nkx2-3-201ENSMUST00000057178 Npm1Q61937 292 aaKnown RBP28.99■■■□□ 2.23
Nkx2-3-201ENSMUST00000057178 Grin2bQ01097 1482 aa28.95■■■□□ 2.22
Nkx2-3-201ENSMUST00000057178 Shroom4Q1W617 1475 aa28.94■■■□□ 2.22
Nkx2-3-201ENSMUST00000057178 Arhgap35Q91YM2 1499 aa28.94■■■□□ 2.22
Nkx2-3-201ENSMUST00000057178 Zeb1Q64318 1117 aa28.91■■■□□ 2.22
Nkx2-3-201ENSMUST00000057178 Neurod1Q60867 357 aa28.9■■■□□ 2.22
Nkx2-3-201ENSMUST00000057178 LrpprcQ6PB66 1392 aaKnown RBP28.86■■■□□ 2.21
Nkx2-3-201ENSMUST00000057178 Clip1Q922J3 1391 aa28.81■■■□□ 2.2
Nkx2-3-201ENSMUST00000057178 Kif21aQ9QXL2 1672 aa28.8■■■□□ 2.2
Nkx2-3-201ENSMUST00000057178 PogzQ8BZH4 1409 aaKnown RBP28.79■■■□□ 2.2
Nkx2-3-201ENSMUST00000057178 UbtfP25976 765 aaKnown RBP28.75■■■□□ 2.19
Nkx2-3-201ENSMUST00000057178 Map3k1P53349 1493 aa28.74■■■□□ 2.19
Nkx2-3-201ENSMUST00000057178 Dhx29Q6PGC1 1365 aaKnown RBP28.73■■■□□ 2.19
Nkx2-3-201ENSMUST00000057178 Duox2A2AQ99 1517 aa28.69■■■□□ 2.18
Nkx2-3-201ENSMUST00000057178 Sall2Q9QX96 1004 aa28.67■■■□□ 2.18
Nkx2-3-201ENSMUST00000057178 Efcab5A0JP43 1406 aa28.67■■■□□ 2.18
Nkx2-3-201ENSMUST00000057178 Mroh2bQ7M6Y6 1581 aa28.64■■■□□ 2.17
Nkx2-3-201ENSMUST00000057178 Eea1Q8BL66 1411 aa28.61■■■□□ 2.17
Nkx2-3-201ENSMUST00000057178 Crocc2F6XLV1 1638 aa28.58■■■□□ 2.17
Nkx2-3-201ENSMUST00000057178 Plekhg3Q4VAC9 1341 aa28.54■■■□□ 2.16
Nkx2-3-201ENSMUST00000057178 Las1lA2BE28 776 aaKnown RBP28.52■■■□□ 2.16
Nkx2-3-201ENSMUST00000057178 Arap1Q4LDD4 1452 aa28.52■■■□□ 2.16
Nkx2-3-201ENSMUST00000057178 Samd9lQ69Z37 1561 aa28.51■■■□□ 2.15
Nkx2-3-201ENSMUST00000057178 Setd5Q5XJV7 1441 aa28.51■■■□□ 2.15
Nkx2-3-201ENSMUST00000057178 AqrQ8CFQ3 1481 aaKnown RBP28.49■■■□□ 2.15
Nkx2-3-201ENSMUST00000057178 Arhgef5E9Q7D5 1581 aa28.44■■■□□ 2.14
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms