RNA–Protein interactions for RNA: ENSMUST00000054814.13

Shprh-202, Transcript of E3 ubiquitin-protein ligase SHPRH, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Shprh, Length 7,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shprh-202ENSMUST00000054814 Rhox8Q6VSS7 320 aa13.33□□□□□ -0.28
Shprh-202ENSMUST00000054814 NischQ80TM9 1593 aa12.3□□□□□ -0.44
Shprh-202ENSMUST00000054814 Esf1Q3V1V3 845 aaKnown RBP12.23□□□□□ -0.45
Shprh-202ENSMUST00000054814 Abcc9P70170 1546 aa12.19□□□□□ -0.46
Shprh-202ENSMUST00000054814 Gm35339A0A140LHH9 1649 aa11.98□□□□□ -0.49
Shprh-202ENSMUST00000054814 Zeb1Q64318 1117 aa11.93□□□□□ -0.5
Shprh-202ENSMUST00000054814 Cngb1E1AZ71 1325 aa11.92□□□□□ -0.5
Shprh-202ENSMUST00000054814 Ccdc136Q3TVA9 1136 aa11.91□□□□□ -0.5
Shprh-202ENSMUST00000054814 Trim41Q5NCC3 630 aa11.69□□□□□ -0.54
Shprh-202ENSMUST00000054814 Npm2Q80W85 207 aa11.68□□□□□ -0.54
Shprh-202ENSMUST00000054814 Il27Q8K3I6 234 aa11.61□□□□□ -0.55
Shprh-202ENSMUST00000054814 Ube2uB1AUC4 352 aa11.47□□□□□ -0.57
Shprh-202ENSMUST00000054814 Zcchc6Q5BLK4 1491 aaKnown RBP11.46□□□□□ -0.57
Shprh-202ENSMUST00000054814 Myt1lP97500 1187 aa11.42□□□□□ -0.58
Shprh-202ENSMUST00000054814 Gab3Q8BSM5 595 aa11.4□□□□□ -0.59
Shprh-202ENSMUST00000054814 Ttbk1Q6PCN3 1308 aa11.38□□□□□ -0.59
Shprh-202ENSMUST00000054814 Npm1Q61937 292 aaKnown RBP11.35□□□□□ -0.59
Shprh-202ENSMUST00000054814 Abcc8B2RUS7 1588 aa11.3□□□□□ -0.6
Shprh-202ENSMUST00000054814 Pelp1Q9DBD5 1123 aaKnown RBP11.27□□□□□ -0.6
Shprh-202ENSMUST00000054814 Ubl4bQ9CQ84 188 aa11.24□□□□□ -0.61
Shprh-202ENSMUST00000054814 Ifnlr1Q8CGK5 535 aa11.21□□□□□ -0.61
Shprh-202ENSMUST00000054814 Plppr3Q7TPB0 716 aa11.19□□□□□ -0.62
Shprh-202ENSMUST00000054814 NacadQ5SWP3 1504 aa11.03□□□□□ -0.64
Shprh-202ENSMUST00000054814 Gm13697A2AK42 830 aa11.02□□□□□ -0.64
Shprh-202ENSMUST00000054814 Ercc6F8VPZ5 1481 aa11.01□□□□□ -0.65
Shprh-202ENSMUST00000054814 Ap3b1Q9Z1T1 1105 aa10.91□□□□□ -0.66
Shprh-202ENSMUST00000054814 Fkbp15Q6P9Q6 1216 aaKnown RBP10.91□□□□□ -0.66
Shprh-202ENSMUST00000054814 Ehmt2Q9Z148 1263 aaKnown RBP10.88□□□□□ -0.67
Shprh-202ENSMUST00000054814 Rb1cc1Q9ESK9 1588 aa10.87□□□□□ -0.67
Shprh-202ENSMUST00000054814 Safb2Q80YR5 991 aaKnown RBP10.85□□□□□ -0.67
Shprh-202ENSMUST00000054814 Os9Q8K2C7 672 aa10.79□□□□□ -0.68
Shprh-202ENSMUST00000054814 Pds5bQ4VA53 1446 aaKnown RBP10.77□□□□□ -0.68
Shprh-202ENSMUST00000054814 Brd4Q9ESU6 1400 aaKnown RBP10.77□□□□□ -0.69
Shprh-202ENSMUST00000054814 Zbtb7cQ8VCZ7 619 aa10.76□□□□□ -0.69
Shprh-202ENSMUST00000054814 Gm13695A2AK44 830 aa10.74□□□□□ -0.69
Shprh-202ENSMUST00000054814 NclP09405 707 aaKnown RBP10.72□□□□□ -0.69
Shprh-202ENSMUST00000054814 Hnrnpul2Q00PI9 745 aaKnown RBP10.72□□□□□ -0.69
Shprh-202ENSMUST00000054814 Ccdc180J3QNE4 1664 aa10.7□□□□□ -0.7
Shprh-202ENSMUST00000054814 UbtfP25976 765 aaKnown RBP10.7□□□□□ -0.7
Shprh-202ENSMUST00000054814 Kdm5dQ62240 1548 aa10.69□□□□□ -0.7
Shprh-202ENSMUST00000054814 HrcG5E8J6 738 aa10.69□□□□□ -0.7
Shprh-202ENSMUST00000054814 Fam50aQ9WV03 339 aaKnown RBP10.67□□□□□ -0.7
Shprh-202ENSMUST00000054814 Kif15Q6P9L6 1387 aa10.67□□□□□ -0.7
Shprh-202ENSMUST00000054814 Las1lA2BE28 776 aaKnown RBP10.67□□□□□ -0.7
Shprh-202ENSMUST00000054814 Ppp1r18Q8BQ30 594 aa10.67□□□□□ -0.7
Shprh-202ENSMUST00000054814 Atp1b4Q99ME6 356 aa10.65□□□□□ -0.71
Shprh-202ENSMUST00000054814 Rsf1E9PWW9 1441 aaKnown RBP10.65□□□□□ -0.71
Shprh-202ENSMUST00000054814 MyclP10166 368 aa10.64□□□□□ -0.71
Shprh-202ENSMUST00000054814 Lmod2Q3UHZ5 550 aa10.61□□□□□ -0.71
Shprh-202ENSMUST00000054814 Cep164Q5DU05 1446 aa10.6□□□□□ -0.71
Shprh-202ENSMUST00000054814 Erich6D3Z6S9 713 aa10.57□□□□□ -0.72
Shprh-202ENSMUST00000054814 Ccdc18Q640L5 1455 aa10.56□□□□□ -0.72
Shprh-202ENSMUST00000054814 Wdr66E9Q743 1299 aa10.54□□□□□ -0.72
Shprh-202ENSMUST00000054814 Rtl1Q7M732 1744 aa10.54□□□□□ -0.72
Shprh-202ENSMUST00000054814 MlecQ6ZQI3 291 aaKnown RBP10.54□□□□□ -0.72
Shprh-202ENSMUST00000054814 Rpgrip1Q9EPQ2 1331 aa10.53□□□□□ -0.72
Shprh-202ENSMUST00000054814 Chic1Q8CBW7 227 aa10.52□□□□□ -0.72
Shprh-202ENSMUST00000054814 Slc24a1Q91WD8 1130 aa10.52□□□□□ -0.72
Shprh-202ENSMUST00000054814 Arhgap27A2AB59 869 aa10.52□□□□□ -0.73
Shprh-202ENSMUST00000054814 Neurod1Q60867 357 aa10.5□□□□□ -0.73
Shprh-202ENSMUST00000054814 Baz1aO88379 1555 aa10.5□□□□□ -0.73
Shprh-202ENSMUST00000054814 Pabpn1Q8CCS6 302 aaKnown RBP10.49□□□□□ -0.73
Shprh-202ENSMUST00000054814 Sycp2Q9CUU3 1500 aa10.48□□□□□ -0.73
Shprh-202ENSMUST00000054814 Phldb1Q6PDH0 1371 aaKnown RBP10.45□□□□□ -0.74
Shprh-202ENSMUST00000054814 Plekhg3Q4VAC9 1341 aa10.42□□□□□ -0.74
Shprh-202ENSMUST00000054814 AknaQ80VW7 1404 aa10.41□□□□□ -0.74
Shprh-202ENSMUST00000054814 Hdac5Q9Z2V6 1113 aa10.39□□□□□ -0.75
Shprh-202ENSMUST00000054814 P3h3Q8CG70 732 aa10.39□□□□□ -0.75
Shprh-202ENSMUST00000054814 Atad2bE9Q166 1460 aaKnown RBP10.35□□□□□ -0.75
Shprh-202ENSMUST00000054814 Cdk11bP24788 784 aaKnown RBP10.35□□□□□ -0.75
Shprh-202ENSMUST00000054814 Arid3cA6PWV5 409 aa10.34□□□□□ -0.75
Shprh-202ENSMUST00000054814 Cux2P70298 1426 aa10.31□□□□□ -0.76
Shprh-202ENSMUST00000054814 Dcaf1Q80TR8 1506 aa10.3□□□□□ -0.76
Shprh-202ENSMUST00000054814 ScribQ80U72 1612 aa10.3□□□□□ -0.76
Shprh-202ENSMUST00000054814 Anp32bQ9EST5 272 aaKnown RBP10.28□□□□□ -0.76
Shprh-202ENSMUST00000054814 Ggt6Q6PDE7 497 aa10.25□□□□□ -0.77
Shprh-202ENSMUST00000054814 Ecm2Q5FW85 670 aa10.24□□□□□ -0.77
Shprh-202ENSMUST00000054814 Zbtb4Q5F293 982 aa10.21□□□□□ -0.77
Shprh-202ENSMUST00000054814 DiexfQ8BTT6 772 aaKnown RBP10.21□□□□□ -0.77
Shprh-202ENSMUST00000054814 Clstn2Q9ER65 966 aa10.2□□□□□ -0.78
Shprh-202ENSMUST00000054814 Smarca4Q3TKT4 1613 aaKnown RBP10.19□□□□□ -0.78
Shprh-202ENSMUST00000054814 Clip1Q922J3 1391 aa10.18□□□□□ -0.78
Shprh-202ENSMUST00000054814 Prdm10Q3UTQ7 1184 aa10.16□□□□□ -0.78
Shprh-202ENSMUST00000054814 Cecr2E9Q2Z1 1453 aa10.16□□□□□ -0.78
Shprh-202ENSMUST00000054814 Cyb5rlB1AS42 316 aa10.15□□□□□ -0.78
Shprh-202ENSMUST00000054814 Golga3P55937 1487 aa10.14□□□□□ -0.79
Shprh-202ENSMUST00000054814 Chic2Q9D9G3 165 aa10.12□□□□□ -0.79
Shprh-202ENSMUST00000054814 Arid4bA2CG63 1314 aaKnown RBP10.12□□□□□ -0.79
Shprh-202ENSMUST00000054814 Iqgap2Q3UQ44 1575 aa10.12□□□□□ -0.79
Shprh-202ENSMUST00000054814 Dnajc5bQ9CQ94 199 aa10.11□□□□□ -0.79
Shprh-202ENSMUST00000054814 Lemd3Q9WU40 921 aa10.09□□□□□ -0.79
Shprh-202ENSMUST00000054814 BlmO88700 1416 aa10.09□□□□□ -0.79
Shprh-202ENSMUST00000054814 Rpap1Q80TE0 1409 aa10.09□□□□□ -0.79
Shprh-202ENSMUST00000054814 Mrc2Q64449 1479 aa10.09□□□□□ -0.79
Shprh-202ENSMUST00000054814 Rrp7aQ9D1C9 280 aaKnown RBP10.09□□□□□ -0.79
Shprh-202ENSMUST00000054814 Setd5Q5XJV7 1441 aa10.08□□□□□ -0.8
Shprh-202ENSMUST00000054814 Bcl11bQ99PV8 884 aa10.07□□□□□ -0.8
Shprh-202ENSMUST00000054814 Smarca2Q6DIC0 1577 aa10.07□□□□□ -0.8
Shprh-202ENSMUST00000054814 Soga1E1U8D0 1418 aa10.07□□□□□ -0.8
Shprh-202ENSMUST00000054814 NefmP08553 848 aa10.07□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms