RNA–Protein interactions for RNA: ENSMUST00000048680.7

Hoxa9-201, Transcript of Homeobox protein Hox-A9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxa9, Length 3,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9-201ENSMUST00000048680 Gm35339A0A140LHH9 1649 aa23.36■■□□□ 1.33
Hoxa9-201ENSMUST00000048680 NischQ80TM9 1593 aa22.96■■□□□ 1.27
Hoxa9-201ENSMUST00000048680 Abcc9P70170 1546 aa22.59■■□□□ 1.21
Hoxa9-201ENSMUST00000048680 Abcc8B2RUS7 1588 aa22.13■■□□□ 1.13
Hoxa9-201ENSMUST00000048680 Rtl1Q7M732 1744 aa21.86■■□□□ 1.09
Hoxa9-201ENSMUST00000048680 ScribQ80U72 1612 aa21.18■□□□□ 0.98
Hoxa9-201ENSMUST00000048680 Ccdc180J3QNE4 1664 aa21.08■□□□□ 0.96
Hoxa9-201ENSMUST00000048680 Dcaf1Q80TR8 1506 aa21.03■□□□□ 0.96
Hoxa9-201ENSMUST00000048680 Rhox8Q6VSS7 320 aa20.57■□□□□ 0.88
Hoxa9-201ENSMUST00000048680 NacadQ5SWP3 1504 aa20.55■□□□□ 0.88
Hoxa9-201ENSMUST00000048680 Zcchc6Q5BLK4 1491 aaKnown RBP20.54■□□□□ 0.88
Hoxa9-201ENSMUST00000048680 Kdm5dQ62240 1548 aa20.54■□□□□ 0.88
Hoxa9-201ENSMUST00000048680 Sycp2Q9CUU3 1500 aa20.14■□□□□ 0.81
Hoxa9-201ENSMUST00000048680 Rb1cc1Q9ESK9 1588 aa20.11■□□□□ 0.81
Hoxa9-201ENSMUST00000048680 Crybg2B7ZCC2 1516 aa20.11■□□□□ 0.81
Hoxa9-201ENSMUST00000048680 Baz1aO88379 1555 aa20.08■□□□□ 0.8
Hoxa9-201ENSMUST00000048680 BicraF8VPZ9 1578 aa19.82■□□□□ 0.76
Hoxa9-201ENSMUST00000048680 Rpgrip1Q9EPQ2 1331 aa19.73■□□□□ 0.75
Hoxa9-201ENSMUST00000048680 Smarca2Q6DIC0 1577 aa19.7■□□□□ 0.74
Hoxa9-201ENSMUST00000048680 HrcG5E8J6 738 aa19.68■□□□□ 0.74
Hoxa9-201ENSMUST00000048680 Ehmt2Q9Z148 1263 aaKnown RBP19.48■□□□□ 0.71
Hoxa9-201ENSMUST00000048680 Pds5bQ4VA53 1446 aaKnown RBP19.2■□□□□ 0.66
Hoxa9-201ENSMUST00000048680 Cep164Q5DU05 1446 aa19.12■□□□□ 0.65
Hoxa9-201ENSMUST00000048680 Atad2bE9Q166 1460 aaKnown RBP19.08■□□□□ 0.64
Hoxa9-201ENSMUST00000048680 Cecr2E9Q2Z1 1453 aa19.06■□□□□ 0.64
Hoxa9-201ENSMUST00000048680 Ccdc136Q3TVA9 1136 aa19.02■□□□□ 0.64
Hoxa9-201ENSMUST00000048680 Acin1Q9JIX8 1338 aaKnown RBP19.02■□□□□ 0.64
Hoxa9-201ENSMUST00000048680 Smarca4Q3TKT4 1613 aaKnown RBP19.01■□□□□ 0.63
Hoxa9-201ENSMUST00000048680 Thoc2B1AZI6 1594 aaKnown RBP18.94■□□□□ 0.62
Hoxa9-201ENSMUST00000048680 Brd4Q9ESU6 1400 aaKnown RBP18.94■□□□□ 0.62
Hoxa9-201ENSMUST00000048680 Top2bQ64511 1612 aa18.91■□□□□ 0.62
Hoxa9-201ENSMUST00000048680 Dnajc5bQ9CQ94 199 aa18.9■□□□□ 0.62
Hoxa9-201ENSMUST00000048680 Iqgap2Q3UQ44 1575 aa18.87■□□□□ 0.61
Hoxa9-201ENSMUST00000048680 Trim41Q5NCC3 630 aa18.86■□□□□ 0.61
Hoxa9-201ENSMUST00000048680 Cttnbp2B9EJA2 1648 aa18.83■□□□□ 0.6
Hoxa9-201ENSMUST00000048680 Ercc6F8VPZ5 1481 aa18.77■□□□□ 0.6
Hoxa9-201ENSMUST00000048680 Golga3P55937 1487 aa18.74■□□□□ 0.59
Hoxa9-201ENSMUST00000048680 Synj1Q8CHC4 1574 aa18.73■□□□□ 0.59
Hoxa9-201ENSMUST00000048680 Wdr62Q3U3T8 1523 aa18.68■□□□□ 0.58
Hoxa9-201ENSMUST00000048680 CftrP26361 1476 aa18.67■□□□□ 0.58
Hoxa9-201ENSMUST00000048680 Frmpd1A2AKB4 1549 aa18.66■□□□□ 0.58
Hoxa9-201ENSMUST00000048680 Pcgf6Q99NA9 353 aa18.64■□□□□ 0.58
Hoxa9-201ENSMUST00000048680 Cc2d2aQ8CFW7 1633 aa18.64■□□□□ 0.57
Hoxa9-201ENSMUST00000048680 Fam135aQ6NS59 1506 aa18.56■□□□□ 0.56
Hoxa9-201ENSMUST00000048680 Rsf1E9PWW9 1441 aaKnown RBP18.52■□□□□ 0.56
Hoxa9-201ENSMUST00000048680 Phldb1Q6PDH0 1371 aaKnown RBP18.5■□□□□ 0.55
Hoxa9-201ENSMUST00000048680 Unc13aQ4KUS2 1712 aa18.4■□□□□ 0.54
Hoxa9-201ENSMUST00000048680 Top2aQ01320 1528 aaKnown RBP18.38■□□□□ 0.53
Hoxa9-201ENSMUST00000048680 TnnQ80Z71 1560 aa18.37■□□□□ 0.53
Hoxa9-201ENSMUST00000048680 Baz1bQ9Z277 1479 aa18.37■□□□□ 0.53
Hoxa9-201ENSMUST00000048680 Eif4g1Q6NZJ6 1600 aaKnown RBP18.36■□□□□ 0.53
Hoxa9-201ENSMUST00000048680 Fmn1Q05860 1466 aa18.36■□□□□ 0.53
Hoxa9-201ENSMUST00000048680 Ccdc88bQ4QRL3 1481 aa18.35■□□□□ 0.53
Hoxa9-201ENSMUST00000048680 Esf1Q3V1V3 845 aaKnown RBP18.33■□□□□ 0.52
Hoxa9-201ENSMUST00000048680 Supt5hO55201 1082 aaKnown RBP18.32■□□□□ 0.52
Hoxa9-201ENSMUST00000048680 Ubl4bQ9CQ84 188 aa18.31■□□□□ 0.52
Hoxa9-201ENSMUST00000048680 Rapgef2Q8CHG7 1496 aa18.31■□□□□ 0.52
Hoxa9-201ENSMUST00000048680 Gab3Q8BSM5 595 aa18.27■□□□□ 0.51
Hoxa9-201ENSMUST00000048680 Zeb1Q64318 1117 aa18.23■□□□□ 0.51
Hoxa9-201ENSMUST00000048680 Cngb1E1AZ71 1325 aa18.14■□□□□ 0.49
Hoxa9-201ENSMUST00000048680 Mrc2Q64449 1479 aa18.13■□□□□ 0.49
Hoxa9-201ENSMUST00000048680 Lamc3Q9R0B6 1581 aa18.07■□□□□ 0.48
Hoxa9-201ENSMUST00000048680 Kif15Q6P9L6 1387 aa18.06■□□□□ 0.48
Hoxa9-201ENSMUST00000048680 Chic1Q8CBW7 227 aa18.06■□□□□ 0.48
Hoxa9-201ENSMUST00000048680 Cux2P70298 1426 aa18■□□□□ 0.47
Hoxa9-201ENSMUST00000048680 NefmP08553 848 aa17.97■□□□□ 0.47
Hoxa9-201ENSMUST00000048680 Neurod1Q60867 357 aa17.95■□□□□ 0.46
Hoxa9-201ENSMUST00000048680 NrkQ9R0G8 1455 aa17.92■□□□□ 0.46
Hoxa9-201ENSMUST00000048680 Cep162Q6ZQ06 1403 aa17.91■□□□□ 0.46
Hoxa9-201ENSMUST00000048680 Ccdc18Q640L5 1455 aa17.9■□□□□ 0.46
Hoxa9-201ENSMUST00000048680 Map3k1P53349 1493 aa17.89■□□□□ 0.45
Hoxa9-201ENSMUST00000048680 Npm1Q61937 292 aaKnown RBP17.83■□□□□ 0.44
Hoxa9-201ENSMUST00000048680 Erich3F6QRE9 1637 aa17.82■□□□□ 0.44
Hoxa9-201ENSMUST00000048680 Mier1Q5UAK0 511 aa17.82■□□□□ 0.44
Hoxa9-201ENSMUST00000048680 TchhA0A0B4J1F9 1599 aa17.79■□□□□ 0.44
Hoxa9-201ENSMUST00000048680 Kif21aQ9QXL2 1672 aa17.79■□□□□ 0.44
Hoxa9-201ENSMUST00000048680 Camsap1A2AHC3 1581 aa17.77■□□□□ 0.44
Hoxa9-201ENSMUST00000048680 AqrQ8CFQ3 1481 aaKnown RBP17.75■□□□□ 0.43
Hoxa9-201ENSMUST00000048680 Sall2Q9QX96 1004 aa17.72■□□□□ 0.43
Hoxa9-201ENSMUST00000048680 Wdr66E9Q743 1299 aa17.71■□□□□ 0.43
Hoxa9-201ENSMUST00000048680 Il27Q8K3I6 234 aa17.71■□□□□ 0.43
Hoxa9-201ENSMUST00000048680 Lrriq1Q0P5X1 1673 aa17.71■□□□□ 0.43
Hoxa9-201ENSMUST00000048680 Ppargc1bQ8VHJ7 1014 aa17.68■□□□□ 0.42
Hoxa9-201ENSMUST00000048680 Arhgap35Q91YM2 1499 aa17.67■□□□□ 0.42
Hoxa9-201ENSMUST00000048680 LrpprcQ6PB66 1392 aaKnown RBP17.67■□□□□ 0.42
Hoxa9-201ENSMUST00000048680 UbtfP25976 765 aaKnown RBP17.67■□□□□ 0.42
Hoxa9-201ENSMUST00000048680 Shroom4Q1W617 1475 aa17.67■□□□□ 0.42
Hoxa9-201ENSMUST00000048680 Ncapd3Q6ZQK0 1506 aa17.66■□□□□ 0.42
Hoxa9-201ENSMUST00000048680 Peg3Q3URU2 1571 aa17.65■□□□□ 0.42
Hoxa9-201ENSMUST00000048680 Dhx29Q6PGC1 1365 aaKnown RBP17.64■□□□□ 0.41
Hoxa9-201ENSMUST00000048680 Kdm5bQ80Y84 1544 aa17.63■□□□□ 0.41
Hoxa9-201ENSMUST00000048680 Arhgef5E9Q7D5 1581 aa17.61■□□□□ 0.41
Hoxa9-201ENSMUST00000048680 Gpatch8A2A6A1 1505 aa17.59■□□□□ 0.41
Hoxa9-201ENSMUST00000048680 PogzQ8BZH4 1409 aaKnown RBP17.58■□□□□ 0.41
Hoxa9-201ENSMUST00000048680 Grin2bQ01097 1482 aa17.56■□□□□ 0.4
Hoxa9-201ENSMUST00000048680 Las1lA2BE28 776 aaKnown RBP17.55■□□□□ 0.4
Hoxa9-201ENSMUST00000048680 Crocc2F6XLV1 1638 aa17.55■□□□□ 0.4
Hoxa9-201ENSMUST00000048680 Lmo7E9PYF4 1699 aaKnown RBP17.54■□□□□ 0.4
Hoxa9-201ENSMUST00000048680 Urb2E9Q7L1 1524 aaKnown RBP17.54■□□□□ 0.4
Hoxa9-201ENSMUST00000048680 Plb1Q3TTY0 1478 aa17.53■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms