RNA–Protein interactions for RNA: ENSMUST00000038900.14

Pds5b-202, Transcript of Sister chromatid cohesion protein PDS5 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Pds5b, Length 7,315 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5b-202ENSMUST00000038900 NischQ80TM9 1593 aa15.35■□□□□ 0.05
Pds5b-202ENSMUST00000038900 Gm35339A0A140LHH9 1649 aa15.08■□□□□ 0
Pds5b-202ENSMUST00000038900 Abcc9P70170 1546 aa14.89□□□□□ -0.03
Pds5b-202ENSMUST00000038900 Abcc8B2RUS7 1588 aa14.63□□□□□ -0.07
Pds5b-202ENSMUST00000038900 Rhox8Q6VSS7 320 aa14.16□□□□□ -0.14
Pds5b-202ENSMUST00000038900 ScribQ80U72 1612 aa13.79□□□□□ -0.2
Pds5b-202ENSMUST00000038900 Rtl1Q7M732 1744 aa13.55□□□□□ -0.24
Pds5b-202ENSMUST00000038900 Kdm5dQ62240 1548 aa13.45□□□□□ -0.26
Pds5b-202ENSMUST00000038900 Rb1cc1Q9ESK9 1588 aa13.45□□□□□ -0.26
Pds5b-202ENSMUST00000038900 Zcchc6Q5BLK4 1491 aaKnown RBP13.45□□□□□ -0.26
Pds5b-202ENSMUST00000038900 Dcaf1Q80TR8 1506 aa13.42□□□□□ -0.26
Pds5b-202ENSMUST00000038900 Ccdc180J3QNE4 1664 aa13.37□□□□□ -0.27
Pds5b-202ENSMUST00000038900 Ccdc136Q3TVA9 1136 aa13.26□□□□□ -0.29
Pds5b-202ENSMUST00000038900 Baz1aO88379 1555 aa13.23□□□□□ -0.29
Pds5b-202ENSMUST00000038900 NacadQ5SWP3 1504 aa13.22□□□□□ -0.29
Pds5b-202ENSMUST00000038900 Sycp2Q9CUU3 1500 aa13□□□□□ -0.33
Pds5b-202ENSMUST00000038900 Ehmt2Q9Z148 1263 aaKnown RBP12.97□□□□□ -0.33
Pds5b-202ENSMUST00000038900 Smarca2Q6DIC0 1577 aa12.96□□□□□ -0.33
Pds5b-202ENSMUST00000038900 Crybg2B7ZCC2 1516 aa12.87□□□□□ -0.35
Pds5b-202ENSMUST00000038900 BicraF8VPZ9 1578 aa12.85□□□□□ -0.35
Pds5b-202ENSMUST00000038900 Cecr2E9Q2Z1 1453 aa12.84□□□□□ -0.35
Pds5b-202ENSMUST00000038900 HrcG5E8J6 738 aa12.78□□□□□ -0.36
Pds5b-202ENSMUST00000038900 Trim41Q5NCC3 630 aa12.76□□□□□ -0.37
Pds5b-202ENSMUST00000038900 Acin1Q9JIX8 1338 aaKnown RBP12.7□□□□□ -0.38
Pds5b-202ENSMUST00000038900 Chic1Q8CBW7 227 aa12.64□□□□□ -0.39
Pds5b-202ENSMUST00000038900 Synj1Q8CHC4 1574 aa12.64□□□□□ -0.39
Pds5b-202ENSMUST00000038900 Rpgrip1Q9EPQ2 1331 aa12.6□□□□□ -0.39
Pds5b-202ENSMUST00000038900 Cngb1E1AZ71 1325 aa12.6□□□□□ -0.39
Pds5b-202ENSMUST00000038900 Rsf1E9PWW9 1441 aaKnown RBP12.59□□□□□ -0.39
Pds5b-202ENSMUST00000038900 Ccdc88bQ4QRL3 1481 aa12.55□□□□□ -0.4
Pds5b-202ENSMUST00000038900 Brd4Q9ESU6 1400 aaKnown RBP12.53□□□□□ -0.4
Pds5b-202ENSMUST00000038900 Cep164Q5DU05 1446 aa12.51□□□□□ -0.41
Pds5b-202ENSMUST00000038900 CftrP26361 1476 aa12.5□□□□□ -0.41
Pds5b-202ENSMUST00000038900 Gab3Q8BSM5 595 aa12.48□□□□□ -0.41
Pds5b-202ENSMUST00000038900 Golga3P55937 1487 aa12.45□□□□□ -0.42
Pds5b-202ENSMUST00000038900 Pcgf6Q99NA9 353 aa12.4□□□□□ -0.42
Pds5b-202ENSMUST00000038900 Esf1Q3V1V3 845 aaKnown RBP12.39□□□□□ -0.43
Pds5b-202ENSMUST00000038900 Smarca4Q3TKT4 1613 aaKnown RBP12.39□□□□□ -0.43
Pds5b-202ENSMUST00000038900 Top2bQ64511 1612 aa12.37□□□□□ -0.43
Pds5b-202ENSMUST00000038900 Cttnbp2B9EJA2 1648 aa12.37□□□□□ -0.43
Pds5b-202ENSMUST00000038900 Cc2d2aQ8CFW7 1633 aa12.36□□□□□ -0.43
Pds5b-202ENSMUST00000038900 Iqgap2Q3UQ44 1575 aa12.27□□□□□ -0.44
Pds5b-202ENSMUST00000038900 Supt5hO55201 1082 aaKnown RBP12.25□□□□□ -0.45
Pds5b-202ENSMUST00000038900 Atad2bE9Q166 1460 aaKnown RBP12.15□□□□□ -0.46
Pds5b-202ENSMUST00000038900 Top2aQ01320 1528 aaKnown RBP12.1□□□□□ -0.47
Pds5b-202ENSMUST00000038900 Fmn1Q05860 1466 aa12.1□□□□□ -0.47
Pds5b-202ENSMUST00000038900 Frmpd1A2AKB4 1549 aa12.09□□□□□ -0.47
Pds5b-202ENSMUST00000038900 Rapgef2Q8CHG7 1496 aa12.07□□□□□ -0.48
Pds5b-202ENSMUST00000038900 Pds5bQ4VA53 1446 aaKnown RBP12.06□□□□□ -0.48
Pds5b-202ENSMUST00000038900 Wdr62Q3U3T8 1523 aa12.03□□□□□ -0.48
Pds5b-202ENSMUST00000038900 Mier1Q5UAK0 511 aa12.03□□□□□ -0.48
Pds5b-202ENSMUST00000038900 Unc13aQ4KUS2 1712 aa12.02□□□□□ -0.48
Pds5b-202ENSMUST00000038900 Myt1lP97500 1187 aa12□□□□□ -0.49
Pds5b-202ENSMUST00000038900 Zeb1Q64318 1117 aa11.99□□□□□ -0.49
Pds5b-202ENSMUST00000038900 TnnQ80Z71 1560 aa11.99□□□□□ -0.49
Pds5b-202ENSMUST00000038900 Cep162Q6ZQ06 1403 aa11.98□□□□□ -0.49
Pds5b-202ENSMUST00000038900 PtprkP35822 1457 aa11.98□□□□□ -0.49
Pds5b-202ENSMUST00000038900 Neurod1Q60867 357 aa11.97□□□□□ -0.49
Pds5b-202ENSMUST00000038900 Il27Q8K3I6 234 aa11.95□□□□□ -0.5
Pds5b-202ENSMUST00000038900 Eif4g1Q6NZJ6 1600 aaKnown RBP11.93□□□□□ -0.5
Pds5b-202ENSMUST00000038900 Sall2Q9QX96 1004 aa11.91□□□□□ -0.5
Pds5b-202ENSMUST00000038900 UbtfP25976 765 aaKnown RBP11.9□□□□□ -0.5
Pds5b-202ENSMUST00000038900 Npm2Q80W85 207 aa11.9□□□□□ -0.5
Pds5b-202ENSMUST00000038900 Kif15Q6P9L6 1387 aa11.89□□□□□ -0.51
Pds5b-202ENSMUST00000038900 Lamc3Q9R0B6 1581 aa11.89□□□□□ -0.51
Pds5b-202ENSMUST00000038900 Ercc6F8VPZ5 1481 aa11.85□□□□□ -0.51
Pds5b-202ENSMUST00000038900 Arhgap35Q91YM2 1499 aa11.85□□□□□ -0.51
Pds5b-202ENSMUST00000038900 Plekhg3Q4VAC9 1341 aa11.84□□□□□ -0.51
Pds5b-202ENSMUST00000038900 Camsap1A2AHC3 1581 aa11.82□□□□□ -0.52
Pds5b-202ENSMUST00000038900 Aebp2Q9Z248 504 aaKnown RBP11.82□□□□□ -0.52
Pds5b-202ENSMUST00000038900 Thoc2B1AZI6 1594 aaKnown RBP11.81□□□□□ -0.52
Pds5b-202ENSMUST00000038900 Ppargc1bQ8VHJ7 1014 aa11.79□□□□□ -0.52
Pds5b-202ENSMUST00000038900 Ap3b1Q9Z1T1 1105 aa11.78□□□□□ -0.52
Pds5b-202ENSMUST00000038900 NrkQ9R0G8 1455 aa11.77□□□□□ -0.52
Pds5b-202ENSMUST00000038900 Clip1Q922J3 1391 aa11.76□□□□□ -0.53
Pds5b-202ENSMUST00000038900 Shroom4Q1W617 1475 aa11.74□□□□□ -0.53
Pds5b-202ENSMUST00000038900 Arap1Q4LDD4 1452 aa11.74□□□□□ -0.53
Pds5b-202ENSMUST00000038900 Grin2bQ01097 1482 aa11.74□□□□□ -0.53
Pds5b-202ENSMUST00000038900 Dnajc5bQ9CQ94 199 aa11.73□□□□□ -0.53
Pds5b-202ENSMUST00000038900 NefmP08553 848 aa11.72□□□□□ -0.53
Pds5b-202ENSMUST00000038900 Cux2P70298 1426 aa11.71□□□□□ -0.53
Pds5b-202ENSMUST00000038900 Ubl4bQ9CQ84 188 aa11.71□□□□□ -0.53
Pds5b-202ENSMUST00000038900 Phldb1Q6PDH0 1371 aaKnown RBP11.7□□□□□ -0.54
Pds5b-202ENSMUST00000038900 AqrQ8CFQ3 1481 aaKnown RBP11.68□□□□□ -0.54
Pds5b-202ENSMUST00000038900 Baz1bQ9Z277 1479 aa11.66□□□□□ -0.54
Pds5b-202ENSMUST00000038900 Ccdc18Q640L5 1455 aa11.65□□□□□ -0.54
Pds5b-202ENSMUST00000038900 Mroh2bQ7M6Y6 1581 aa11.64□□□□□ -0.55
Pds5b-202ENSMUST00000038900 Ncapd3Q6ZQK0 1506 aa11.62□□□□□ -0.55
Pds5b-202ENSMUST00000038900 Setd5Q5XJV7 1441 aa11.62□□□□□ -0.55
Pds5b-202ENSMUST00000038900 Fam135aQ6NS59 1506 aa11.62□□□□□ -0.55
Pds5b-202ENSMUST00000038900 Arhgef5E9Q7D5 1581 aa11.62□□□□□ -0.55
Pds5b-202ENSMUST00000038900 Ankrd26Q811D2 1581 aa11.61□□□□□ -0.55
Pds5b-202ENSMUST00000038900 Eea1Q8BL66 1411 aa11.6□□□□□ -0.55
Pds5b-202ENSMUST00000038900 Cux1P53564 1515 aa11.59□□□□□ -0.55
Pds5b-202ENSMUST00000038900 Npm1Q61937 292 aaKnown RBP11.59□□□□□ -0.55
Pds5b-202ENSMUST00000038900 Duox2A2AQ99 1517 aa11.58□□□□□ -0.56
Pds5b-202ENSMUST00000038900 Map3k1P53349 1493 aa11.58□□□□□ -0.56
Pds5b-202ENSMUST00000038900 Samd9lQ69Z37 1561 aa11.58□□□□□ -0.56
Pds5b-202ENSMUST00000038900 LrpprcQ6PB66 1392 aaKnown RBP11.58□□□□□ -0.56
Pds5b-202ENSMUST00000038900 Slx4Q6P1D7 1565 aa11.57□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms