RNA–Protein interactions for RNA: ENSMUST00000035158.15

Trf-201, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trf, Length 2,571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trf-201ENSMUST00000035158 NischQ80TM9 1593 aa28.52■■■□□ 2.16
Trf-201ENSMUST00000035158 Gm35339A0A140LHH9 1649 aa27.9■■■□□ 2.06
Trf-201ENSMUST00000035158 Abcc9P70170 1546 aa27.55■■■□□ 2
Trf-201ENSMUST00000035158 Abcc8B2RUS7 1588 aa27.17■■□□□ 1.94
Trf-201ENSMUST00000035158 Rhox8Q6VSS7 320 aa26.43■■□□□ 1.82
Trf-201ENSMUST00000035158 ScribQ80U72 1612 aa25.64■■□□□ 1.7
Trf-201ENSMUST00000035158 Kdm5dQ62240 1548 aa25.08■■□□□ 1.61
Trf-201ENSMUST00000035158 Rb1cc1Q9ESK9 1588 aa24.96■■□□□ 1.59
Trf-201ENSMUST00000035158 Dcaf1Q80TR8 1506 aa24.92■■□□□ 1.58
Trf-201ENSMUST00000035158 NacadQ5SWP3 1504 aa24.8■■□□□ 1.56
Trf-201ENSMUST00000035158 Ccdc136Q3TVA9 1136 aa24.67■■□□□ 1.54
Trf-201ENSMUST00000035158 Rtl1Q7M732 1744 aa24.65■■□□□ 1.54
Trf-201ENSMUST00000035158 Baz1aO88379 1555 aa24.54■■□□□ 1.52
Trf-201ENSMUST00000035158 Zcchc6Q5BLK4 1491 aaKnown RBP24.44■■□□□ 1.5
Trf-201ENSMUST00000035158 Sycp2Q9CUU3 1500 aa24.32■■□□□ 1.48
Trf-201ENSMUST00000035158 Ccdc180J3QNE4 1664 aa24.3■■□□□ 1.48
Trf-201ENSMUST00000035158 Smarca2Q6DIC0 1577 aa23.95■■□□□ 1.42
Trf-201ENSMUST00000035158 Crybg2B7ZCC2 1516 aa23.94■■□□□ 1.42
Trf-201ENSMUST00000035158 BicraF8VPZ9 1578 aa23.93■■□□□ 1.42
Trf-201ENSMUST00000035158 Cecr2E9Q2Z1 1453 aa23.82■■□□□ 1.4
Trf-201ENSMUST00000035158 Trim41Q5NCC3 630 aa23.74■■□□□ 1.39
Trf-201ENSMUST00000035158 Cngb1E1AZ71 1325 aa23.55■■□□□ 1.36
Trf-201ENSMUST00000035158 HrcG5E8J6 738 aa23.4■■□□□ 1.34
Trf-201ENSMUST00000035158 Brd4Q9ESU6 1400 aaKnown RBP23.4■■□□□ 1.34
Trf-201ENSMUST00000035158 Esf1Q3V1V3 845 aaKnown RBP23.39■■□□□ 1.34
Trf-201ENSMUST00000035158 Synj1Q8CHC4 1574 aa23.38■■□□□ 1.33
Trf-201ENSMUST00000035158 Ehmt2Q9Z148 1263 aaKnown RBP23.28■■□□□ 1.32
Trf-201ENSMUST00000035158 Chic1Q8CBW7 227 aa23.26■■□□□ 1.31
Trf-201ENSMUST00000035158 CftrP26361 1476 aa23.25■■□□□ 1.31
Trf-201ENSMUST00000035158 Smarca4Q3TKT4 1613 aaKnown RBP23.15■■□□□ 1.3
Trf-201ENSMUST00000035158 Gab3Q8BSM5 595 aa23.14■■□□□ 1.29
Trf-201ENSMUST00000035158 Rsf1E9PWW9 1441 aaKnown RBP23.09■■□□□ 1.29
Trf-201ENSMUST00000035158 Ccdc88bQ4QRL3 1481 aa23.05■■□□□ 1.28
Trf-201ENSMUST00000035158 Golga3P55937 1487 aa23.05■■□□□ 1.28
Trf-201ENSMUST00000035158 Cttnbp2B9EJA2 1648 aa22.98■■□□□ 1.27
Trf-201ENSMUST00000035158 Iqgap2Q3UQ44 1575 aa22.96■■□□□ 1.27
Trf-201ENSMUST00000035158 Cep164Q5DU05 1446 aa22.93■■□□□ 1.26
Trf-201ENSMUST00000035158 Atad2bE9Q166 1460 aaKnown RBP22.89■■□□□ 1.26
Trf-201ENSMUST00000035158 Pds5bQ4VA53 1446 aaKnown RBP22.86■■□□□ 1.25
Trf-201ENSMUST00000035158 Cc2d2aQ8CFW7 1633 aa22.74■■□□□ 1.23
Trf-201ENSMUST00000035158 Top2bQ64511 1612 aa22.72■■□□□ 1.23
Trf-201ENSMUST00000035158 Frmpd1A2AKB4 1549 aa22.64■■□□□ 1.21
Trf-201ENSMUST00000035158 Il27Q8K3I6 234 aa22.56■■□□□ 1.2
Trf-201ENSMUST00000035158 Wdr62Q3U3T8 1523 aa22.53■■□□□ 1.2
Trf-201ENSMUST00000035158 Ercc6F8VPZ5 1481 aa22.5■■□□□ 1.19
Trf-201ENSMUST00000035158 Fmn1Q05860 1466 aa22.46■■□□□ 1.19
Trf-201ENSMUST00000035158 Myt1lP97500 1187 aa22.4■■□□□ 1.18
Trf-201ENSMUST00000035158 Kif15Q6P9L6 1387 aa22.38■■□□□ 1.17
Trf-201ENSMUST00000035158 Npm2Q80W85 207 aa22.34■■□□□ 1.17
Trf-201ENSMUST00000035158 Dnajc5bQ9CQ94 199 aa22.34■■□□□ 1.17
Trf-201ENSMUST00000035158 Top2aQ01320 1528 aaKnown RBP22.29■■□□□ 1.16
Trf-201ENSMUST00000035158 Ubl4bQ9CQ84 188 aa22.29■■□□□ 1.16
Trf-201ENSMUST00000035158 Unc13aQ4KUS2 1712 aa22.27■■□□□ 1.15
Trf-201ENSMUST00000035158 Acin1Q9JIX8 1338 aaKnown RBP22.24■■□□□ 1.15
Trf-201ENSMUST00000035158 Thoc2B1AZI6 1594 aaKnown RBP22.23■■□□□ 1.15
Trf-201ENSMUST00000035158 Rapgef2Q8CHG7 1496 aa22.21■■□□□ 1.15
Trf-201ENSMUST00000035158 Phldb1Q6PDH0 1371 aaKnown RBP22.16■■□□□ 1.14
Trf-201ENSMUST00000035158 TnnQ80Z71 1560 aa22.14■■□□□ 1.13
Trf-201ENSMUST00000035158 Lamc3Q9R0B6 1581 aa22.12■■□□□ 1.13
Trf-201ENSMUST00000035158 PtprkP35822 1457 aa22.11■■□□□ 1.13
Trf-201ENSMUST00000035158 Cep162Q6ZQ06 1403 aa22.08■■□□□ 1.13
Trf-201ENSMUST00000035158 Cux2P70298 1426 aa22.06■■□□□ 1.12
Trf-201ENSMUST00000035158 Zeb1Q64318 1117 aa22.02■■□□□ 1.12
Trf-201ENSMUST00000035158 Npm1Q61937 292 aaKnown RBP22.01■■□□□ 1.11
Trf-201ENSMUST00000035158 Camsap1A2AHC3 1581 aa21.98■■□□□ 1.11
Trf-201ENSMUST00000035158 Ccdc18Q640L5 1455 aa21.93■■□□□ 1.1
Trf-201ENSMUST00000035158 UbtfP25976 765 aaKnown RBP21.93■■□□□ 1.1
Trf-201ENSMUST00000035158 Ap3b1Q9Z1T1 1105 aa21.92■■□□□ 1.1
Trf-201ENSMUST00000035158 Fam135aQ6NS59 1506 aa21.89■■□□□ 1.09
Trf-201ENSMUST00000035158 Rpgrip1Q9EPQ2 1331 aa21.87■■□□□ 1.09
Trf-201ENSMUST00000035158 Plekhg3Q4VAC9 1341 aa21.86■■□□□ 1.09
Trf-201ENSMUST00000035158 Arhgap35Q91YM2 1499 aa21.84■■□□□ 1.09
Trf-201ENSMUST00000035158 Grin2bQ01097 1482 aa21.83■■□□□ 1.09
Trf-201ENSMUST00000035158 Shroom4Q1W617 1475 aa21.78■■□□□ 1.08
Trf-201ENSMUST00000035158 Mier1Q5UAK0 511 aa21.78■■□□□ 1.08
Trf-201ENSMUST00000035158 Clip1Q922J3 1391 aa21.76■■□□□ 1.07
Trf-201ENSMUST00000035158 LrpprcQ6PB66 1392 aaKnown RBP21.74■■□□□ 1.07
Trf-201ENSMUST00000035158 NrkQ9R0G8 1455 aa21.73■■□□□ 1.07
Trf-201ENSMUST00000035158 Eif4g1Q6NZJ6 1600 aaKnown RBP21.73■■□□□ 1.07
Trf-201ENSMUST00000035158 Baz1bQ9Z277 1479 aa21.72■■□□□ 1.07
Trf-201ENSMUST00000035158 Dhx29Q6PGC1 1365 aaKnown RBP21.66■■□□□ 1.06
Trf-201ENSMUST00000035158 Duox2A2AQ99 1517 aa21.65■■□□□ 1.06
Trf-201ENSMUST00000035158 PogzQ8BZH4 1409 aaKnown RBP21.63■■□□□ 1.05
Trf-201ENSMUST00000035158 Mrc2Q64449 1479 aa21.58■■□□□ 1.05
Trf-201ENSMUST00000035158 Setd5Q5XJV7 1441 aa21.58■■□□□ 1.05
Trf-201ENSMUST00000035158 Mroh2bQ7M6Y6 1581 aa21.58■■□□□ 1.04
Trf-201ENSMUST00000035158 Rad54l2Q99NG0 1466 aa21.56■■□□□ 1.04
Trf-201ENSMUST00000035158 Arap1Q4LDD4 1452 aa21.53■■□□□ 1.04
Trf-201ENSMUST00000035158 Kif21aQ9QXL2 1672 aa21.53■■□□□ 1.04
Trf-201ENSMUST00000035158 Efcab5A0JP43 1406 aa21.52■■□□□ 1.04
Trf-201ENSMUST00000035158 Eea1Q8BL66 1411 aa21.51■■□□□ 1.03
Trf-201ENSMUST00000035158 Samd9lQ69Z37 1561 aa21.51■■□□□ 1.03
Trf-201ENSMUST00000035158 Lmod2Q3UHZ5 550 aa21.48■■□□□ 1.03
Trf-201ENSMUST00000035158 Map3k1P53349 1493 aa21.44■■□□□ 1.02
Trf-201ENSMUST00000035158 Plb1Q3TTY0 1478 aa21.41■■□□□ 1.02
Trf-201ENSMUST00000035158 AqrQ8CFQ3 1481 aaKnown RBP21.4■■□□□ 1.02
Trf-201ENSMUST00000035158 Crocc2F6XLV1 1638 aa21.39■■□□□ 1.01
Trf-201ENSMUST00000035158 Cux1P53564 1515 aa21.39■■□□□ 1.01
Trf-201ENSMUST00000035158 Carmil1Q6EDY6 1374 aa21.35■■□□□ 1.01
Trf-201ENSMUST00000035158 Ankrd26Q811D2 1581 aa21.35■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms