RNA–Protein interactions for RNA: ENSMUST00000034699.7

Scg3-201, Transcript of Secretogranin-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scg3, Length 2,384 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scg3-201ENSMUST00000034699 NischQ80TM9 1593 aa26.1■■□□□ 1.77
Scg3-201ENSMUST00000034699 Gm35339A0A140LHH9 1649 aa25.65■■□□□ 1.7
Scg3-201ENSMUST00000034699 Abcc9P70170 1546 aa25.33■■□□□ 1.65
Scg3-201ENSMUST00000034699 Abcc8B2RUS7 1588 aa24.77■■□□□ 1.56
Scg3-201ENSMUST00000034699 Rhox8Q6VSS7 320 aa24.19■■□□□ 1.46
Scg3-201ENSMUST00000034699 Rtl1Q7M732 1744 aa23.86■■□□□ 1.41
Scg3-201ENSMUST00000034699 Ccdc180J3QNE4 1664 aa23.41■■□□□ 1.34
Scg3-201ENSMUST00000034699 ScribQ80U72 1612 aa23.1■■□□□ 1.29
Scg3-201ENSMUST00000034699 Dcaf1Q80TR8 1506 aa23.1■■□□□ 1.29
Scg3-201ENSMUST00000034699 Zcchc6Q5BLK4 1491 aaKnown RBP22.98■■□□□ 1.27
Scg3-201ENSMUST00000034699 Rb1cc1Q9ESK9 1588 aa22.88■■□□□ 1.25
Scg3-201ENSMUST00000034699 Kdm5dQ62240 1548 aa22.68■■□□□ 1.22
Scg3-201ENSMUST00000034699 Baz1aO88379 1555 aa22.6■■□□□ 1.21
Scg3-201ENSMUST00000034699 NacadQ5SWP3 1504 aa22.49■■□□□ 1.19
Scg3-201ENSMUST00000034699 Ccdc136Q3TVA9 1136 aa22.43■■□□□ 1.18
Scg3-201ENSMUST00000034699 HrcG5E8J6 738 aa22.29■■□□□ 1.16
Scg3-201ENSMUST00000034699 Crybg2B7ZCC2 1516 aa22.17■■□□□ 1.14
Scg3-201ENSMUST00000034699 Smarca2Q6DIC0 1577 aa22.09■■□□□ 1.13
Scg3-201ENSMUST00000034699 Rpgrip1Q9EPQ2 1331 aa22.03■■□□□ 1.12
Scg3-201ENSMUST00000034699 Sycp2Q9CUU3 1500 aa22■■□□□ 1.11
Scg3-201ENSMUST00000034699 Trim41Q5NCC3 630 aa21.96■■□□□ 1.11
Scg3-201ENSMUST00000034699 Acin1Q9JIX8 1338 aaKnown RBP21.75■■□□□ 1.07
Scg3-201ENSMUST00000034699 Ehmt2Q9Z148 1263 aaKnown RBP21.74■■□□□ 1.07
Scg3-201ENSMUST00000034699 Cep164Q5DU05 1446 aa21.65■■□□□ 1.06
Scg3-201ENSMUST00000034699 Brd4Q9ESU6 1400 aaKnown RBP21.56■■□□□ 1.04
Scg3-201ENSMUST00000034699 Cecr2E9Q2Z1 1453 aa21.55■■□□□ 1.04
Scg3-201ENSMUST00000034699 BicraF8VPZ9 1578 aa21.52■■□□□ 1.03
Scg3-201ENSMUST00000034699 Cngb1E1AZ71 1325 aa21.46■■□□□ 1.03
Scg3-201ENSMUST00000034699 Synj1Q8CHC4 1574 aa21.39■■□□□ 1.01
Scg3-201ENSMUST00000034699 Rsf1E9PWW9 1441 aaKnown RBP21.38■■□□□ 1.01
Scg3-201ENSMUST00000034699 Chic1Q8CBW7 227 aa21.36■■□□□ 1.01
Scg3-201ENSMUST00000034699 Golga3P55937 1487 aa21.34■■□□□ 1.01
Scg3-201ENSMUST00000034699 CftrP26361 1476 aa21.25■□□□□ 0.99
Scg3-201ENSMUST00000034699 Ccdc88bQ4QRL3 1481 aa21.24■□□□□ 0.99
Scg3-201ENSMUST00000034699 Gab3Q8BSM5 595 aa21.19■□□□□ 0.98
Scg3-201ENSMUST00000034699 Esf1Q3V1V3 845 aaKnown RBP21.16■□□□□ 0.98
Scg3-201ENSMUST00000034699 Cttnbp2B9EJA2 1648 aa21.15■□□□□ 0.98
Scg3-201ENSMUST00000034699 Top2bQ64511 1612 aa21.11■□□□□ 0.97
Scg3-201ENSMUST00000034699 Smarca4Q3TKT4 1613 aaKnown RBP21.06■□□□□ 0.96
Scg3-201ENSMUST00000034699 Cc2d2aQ8CFW7 1633 aa20.92■□□□□ 0.94
Scg3-201ENSMUST00000034699 Pcgf6Q99NA9 353 aa20.8■□□□□ 0.92
Scg3-201ENSMUST00000034699 Iqgap2Q3UQ44 1575 aa20.78■□□□□ 0.92
Scg3-201ENSMUST00000034699 Fmn1Q05860 1466 aa20.78■□□□□ 0.92
Scg3-201ENSMUST00000034699 Top2aQ01320 1528 aaKnown RBP20.69■□□□□ 0.9
Scg3-201ENSMUST00000034699 Rapgef2Q8CHG7 1496 aa20.68■□□□□ 0.9
Scg3-201ENSMUST00000034699 Atad2bE9Q166 1460 aaKnown RBP20.65■□□□□ 0.9
Scg3-201ENSMUST00000034699 Mier1Q5UAK0 511 aa20.61■□□□□ 0.89
Scg3-201ENSMUST00000034699 NefmP08553 848 aa20.55■□□□□ 0.88
Scg3-201ENSMUST00000034699 Pds5bQ4VA53 1446 aaKnown RBP20.54■□□□□ 0.88
Scg3-201ENSMUST00000034699 Supt5hO55201 1082 aaKnown RBP20.52■□□□□ 0.88
Scg3-201ENSMUST00000034699 Cep162Q6ZQ06 1403 aa20.52■□□□□ 0.88
Scg3-201ENSMUST00000034699 Myt1lP97500 1187 aa20.44■□□□□ 0.86
Scg3-201ENSMUST00000034699 TnnQ80Z71 1560 aa20.42■□□□□ 0.86
Scg3-201ENSMUST00000034699 Npm2Q80W85 207 aa20.41■□□□□ 0.86
Scg3-201ENSMUST00000034699 Zeb1Q64318 1117 aa20.4■□□□□ 0.86
Scg3-201ENSMUST00000034699 UbtfP25976 765 aaKnown RBP20.39■□□□□ 0.85
Scg3-201ENSMUST00000034699 Frmpd1A2AKB4 1549 aa20.36■□□□□ 0.85
Scg3-201ENSMUST00000034699 Wdr62Q3U3T8 1523 aa20.35■□□□□ 0.85
Scg3-201ENSMUST00000034699 Eif4g1Q6NZJ6 1600 aaKnown RBP20.34■□□□□ 0.85
Scg3-201ENSMUST00000034699 Lamc3Q9R0B6 1581 aa20.25■□□□□ 0.83
Scg3-201ENSMUST00000034699 Clip1Q922J3 1391 aa20.22■□□□□ 0.83
Scg3-201ENSMUST00000034699 Ercc6F8VPZ5 1481 aa20.2■□□□□ 0.82
Scg3-201ENSMUST00000034699 Unc13aQ4KUS2 1712 aa20.18■□□□□ 0.82
Scg3-201ENSMUST00000034699 Kif15Q6P9L6 1387 aa20.17■□□□□ 0.82
Scg3-201ENSMUST00000034699 PtprkP35822 1457 aa20.17■□□□□ 0.82
Scg3-201ENSMUST00000034699 Arhgap35Q91YM2 1499 aa20.17■□□□□ 0.82
Scg3-201ENSMUST00000034699 NrkQ9R0G8 1455 aa20.14■□□□□ 0.82
Scg3-201ENSMUST00000034699 Il27Q8K3I6 234 aa20.14■□□□□ 0.81
Scg3-201ENSMUST00000034699 Plekhg3Q4VAC9 1341 aa20.11■□□□□ 0.81
Scg3-201ENSMUST00000034699 Camsap1A2AHC3 1581 aa20.1■□□□□ 0.81
Scg3-201ENSMUST00000034699 Sall2Q9QX96 1004 aa20.07■□□□□ 0.8
Scg3-201ENSMUST00000034699 Shroom4Q1W617 1475 aa20.07■□□□□ 0.8
Scg3-201ENSMUST00000034699 Las1lA2BE28 776 aaKnown RBP20.02■□□□□ 0.8
Scg3-201ENSMUST00000034699 Eea1Q8BL66 1411 aa20.02■□□□□ 0.79
Scg3-201ENSMUST00000034699 Ccdc18Q640L5 1455 aa19.99■□□□□ 0.79
Scg3-201ENSMUST00000034699 Map3k1P53349 1493 aa19.98■□□□□ 0.79
Scg3-201ENSMUST00000034699 Arap1Q4LDD4 1452 aa19.98■□□□□ 0.79
Scg3-201ENSMUST00000034699 Ncapd3Q6ZQK0 1506 aa19.97■□□□□ 0.79
Scg3-201ENSMUST00000034699 Grin2bQ01097 1482 aa19.96■□□□□ 0.79
Scg3-201ENSMUST00000034699 Setd5Q5XJV7 1441 aa19.93■□□□□ 0.78
Scg3-201ENSMUST00000034699 Arhgef5E9Q7D5 1581 aa19.92■□□□□ 0.78
Scg3-201ENSMUST00000034699 Ap3b1Q9Z1T1 1105 aa19.9■□□□□ 0.78
Scg3-201ENSMUST00000034699 Neurod1Q60867 357 aa19.9■□□□□ 0.78
Scg3-201ENSMUST00000034699 Wdr66E9Q743 1299 aa19.89■□□□□ 0.77
Scg3-201ENSMUST00000034699 Phldb1Q6PDH0 1371 aaKnown RBP19.89■□□□□ 0.77
Scg3-201ENSMUST00000034699 Aebp2Q9Z248 504 aaKnown RBP19.88■□□□□ 0.77
Scg3-201ENSMUST00000034699 Mroh2bQ7M6Y6 1581 aa19.88■□□□□ 0.77
Scg3-201ENSMUST00000034699 TonslQ6NZL6 1363 aa19.85■□□□□ 0.77
Scg3-201ENSMUST00000034699 Thoc2B1AZI6 1594 aaKnown RBP19.84■□□□□ 0.77
Scg3-201ENSMUST00000034699 Baz1bQ9Z277 1479 aa19.84■□□□□ 0.77
Scg3-201ENSMUST00000034699 Cux2P70298 1426 aa19.82■□□□□ 0.76
Scg3-201ENSMUST00000034699 Tiam1Q60610 1591 aa19.79■□□□□ 0.76
Scg3-201ENSMUST00000034699 Erich3F6QRE9 1637 aa19.79■□□□□ 0.76
Scg3-201ENSMUST00000034699 Ubl4bQ9CQ84 188 aa19.78■□□□□ 0.76
Scg3-201ENSMUST00000034699 ClspnQ80YR7 1315 aa19.77■□□□□ 0.76
Scg3-201ENSMUST00000034699 Ankrd26Q811D2 1581 aa19.77■□□□□ 0.76
Scg3-201ENSMUST00000034699 AqrQ8CFQ3 1481 aaKnown RBP19.76■□□□□ 0.75
Scg3-201ENSMUST00000034699 Npm1Q61937 292 aaKnown RBP19.76■□□□□ 0.75
Scg3-201ENSMUST00000034699 Efcab5A0JP43 1406 aa19.72■□□□□ 0.75
Scg3-201ENSMUST00000034699 Naip1Q9QWK5 1403 aa19.72■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms