RNA–Protein interactions for RNA: ENSMUST00000033450.2

Gpc4-201, Transcript of Glypican-4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Gpc4, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gpc4-201ENSMUST00000033450 NischQ80TM9 1593 aa19.93■□□□□ 0.78
Gpc4-201ENSMUST00000033450 Gm35339A0A140LHH9 1649 aa19.77■□□□□ 0.76
Gpc4-201ENSMUST00000033450 Abcc9P70170 1546 aa19.3■□□□□ 0.68
Gpc4-201ENSMUST00000033450 Abcc8B2RUS7 1588 aa19.06■□□□□ 0.64
Gpc4-201ENSMUST00000033450 Rhox8Q6VSS7 320 aa18.47■□□□□ 0.55
Gpc4-201ENSMUST00000033450 Rtl1Q7M732 1744 aa18.47■□□□□ 0.55
Gpc4-201ENSMUST00000033450 Ccdc180J3QNE4 1664 aa18.27■□□□□ 0.52
Gpc4-201ENSMUST00000033450 ScribQ80U72 1612 aa18.11■□□□□ 0.49
Gpc4-201ENSMUST00000033450 Rpgrip1Q9EPQ2 1331 aa18.1■□□□□ 0.49
Gpc4-201ENSMUST00000033450 Zcchc6Q5BLK4 1491 aaKnown RBP17.84■□□□□ 0.45
Gpc4-201ENSMUST00000033450 Acin1Q9JIX8 1338 aaKnown RBP17.76■□□□□ 0.43
Gpc4-201ENSMUST00000033450 Kdm5dQ62240 1548 aa17.64■□□□□ 0.41
Gpc4-201ENSMUST00000033450 Ehmt2Q9Z148 1263 aaKnown RBP17.57■□□□□ 0.4
Gpc4-201ENSMUST00000033450 Dcaf1Q80TR8 1506 aa17.55■□□□□ 0.4
Gpc4-201ENSMUST00000033450 NacadQ5SWP3 1504 aa17.49■□□□□ 0.39
Gpc4-201ENSMUST00000033450 Rb1cc1Q9ESK9 1588 aa17.43■□□□□ 0.38
Gpc4-201ENSMUST00000033450 Pcgf6Q99NA9 353 aa17.36■□□□□ 0.37
Gpc4-201ENSMUST00000033450 HrcG5E8J6 738 aa17.35■□□□□ 0.37
Gpc4-201ENSMUST00000033450 Baz1aO88379 1555 aa17.16■□□□□ 0.34
Gpc4-201ENSMUST00000033450 Sycp2Q9CUU3 1500 aa17.16■□□□□ 0.34
Gpc4-201ENSMUST00000033450 Ccdc136Q3TVA9 1136 aa17.14■□□□□ 0.33
Gpc4-201ENSMUST00000033450 Trim41Q5NCC3 630 aa16.97■□□□□ 0.31
Gpc4-201ENSMUST00000033450 Supt5hO55201 1082 aaKnown RBP16.96■□□□□ 0.31
Gpc4-201ENSMUST00000033450 BicraF8VPZ9 1578 aa16.9■□□□□ 0.3
Gpc4-201ENSMUST00000033450 Crybg2B7ZCC2 1516 aa16.84■□□□□ 0.29
Gpc4-201ENSMUST00000033450 Dnajc5bQ9CQ94 199 aa16.82■□□□□ 0.28
Gpc4-201ENSMUST00000033450 Cep164Q5DU05 1446 aa16.74■□□□□ 0.27
Gpc4-201ENSMUST00000033450 Smarca2Q6DIC0 1577 aa16.74■□□□□ 0.27
Gpc4-201ENSMUST00000033450 Neurod1Q60867 357 aa16.73■□□□□ 0.27
Gpc4-201ENSMUST00000033450 Cecr2E9Q2Z1 1453 aa16.59■□□□□ 0.25
Gpc4-201ENSMUST00000033450 Zeb1Q64318 1117 aa16.54■□□□□ 0.24
Gpc4-201ENSMUST00000033450 Pds5bQ4VA53 1446 aaKnown RBP16.5■□□□□ 0.23
Gpc4-201ENSMUST00000033450 Thoc2B1AZI6 1594 aaKnown RBP16.5■□□□□ 0.23
Gpc4-201ENSMUST00000033450 Chic1Q8CBW7 227 aa16.44■□□□□ 0.22
Gpc4-201ENSMUST00000033450 Rsf1E9PWW9 1441 aaKnown RBP16.44■□□□□ 0.22
Gpc4-201ENSMUST00000033450 Cngb1E1AZ71 1325 aa16.41■□□□□ 0.22
Gpc4-201ENSMUST00000033450 Sall2Q9QX96 1004 aa16.4■□□□□ 0.22
Gpc4-201ENSMUST00000033450 Mier1Q5UAK0 511 aa16.4■□□□□ 0.22
Gpc4-201ENSMUST00000033450 Gab3Q8BSM5 595 aa16.4■□□□□ 0.22
Gpc4-201ENSMUST00000033450 NefmP08553 848 aa16.38■□□□□ 0.21
Gpc4-201ENSMUST00000033450 Synj1Q8CHC4 1574 aa16.3■□□□□ 0.2
Gpc4-201ENSMUST00000033450 Smarca4Q3TKT4 1613 aaKnown RBP16.3■□□□□ 0.2
Gpc4-201ENSMUST00000033450 Las1lA2BE28 776 aaKnown RBP16.29■□□□□ 0.2
Gpc4-201ENSMUST00000033450 Ccdc88bQ4QRL3 1481 aa16.27■□□□□ 0.2
Gpc4-201ENSMUST00000033450 Brd4Q9ESU6 1400 aaKnown RBP16.27■□□□□ 0.2
Gpc4-201ENSMUST00000033450 Atad2bE9Q166 1460 aaKnown RBP16.24■□□□□ 0.19
Gpc4-201ENSMUST00000033450 1700123L14RikQ3V2K7 440 aa16.23■□□□□ 0.19
Gpc4-201ENSMUST00000033450 CftrP26361 1476 aa16.22■□□□□ 0.19
Gpc4-201ENSMUST00000033450 Anks4bQ8K3X6 423 aa16.21■□□□□ 0.19
Gpc4-201ENSMUST00000033450 Csrnp3P59055 597 aa16.18■□□□□ 0.18
Gpc4-201ENSMUST00000033450 Cc2d2aQ8CFW7 1633 aa16.16■□□□□ 0.18
Gpc4-201ENSMUST00000033450 Iqgap2Q3UQ44 1575 aa16.16■□□□□ 0.18
Gpc4-201ENSMUST00000033450 Cttnbp2B9EJA2 1648 aa16.12■□□□□ 0.17
Gpc4-201ENSMUST00000033450 Ercc6F8VPZ5 1481 aa16.12■□□□□ 0.17
Gpc4-201ENSMUST00000033450 Golga3P55937 1487 aa16.11■□□□□ 0.17
Gpc4-201ENSMUST00000033450 Esf1Q3V1V3 845 aaKnown RBP16.1■□□□□ 0.17
Gpc4-201ENSMUST00000033450 Aebp2Q9Z248 504 aaKnown RBP16.09■□□□□ 0.17
Gpc4-201ENSMUST00000033450 Fam135aQ6NS59 1506 aa16.06■□□□□ 0.16
Gpc4-201ENSMUST00000033450 Wdr66E9Q743 1299 aa16.02■□□□□ 0.15
Gpc4-201ENSMUST00000033450 Baz1bQ9Z277 1479 aa16■□□□□ 0.15
Gpc4-201ENSMUST00000033450 UbtfP25976 765 aaKnown RBP15.97■□□□□ 0.15
Gpc4-201ENSMUST00000033450 Frmpd1A2AKB4 1549 aa15.94■□□□□ 0.14
Gpc4-201ENSMUST00000033450 Cdk11bP24788 784 aaKnown RBP15.93■□□□□ 0.14
Gpc4-201ENSMUST00000033450 Ppargc1bQ8VHJ7 1014 aa15.93■□□□□ 0.14
Gpc4-201ENSMUST00000033450 Nop58Q6DFW4 536 aaKnown RBP15.91■□□□□ 0.14
Gpc4-201ENSMUST00000033450 Wdr62Q3U3T8 1523 aa15.91■□□□□ 0.14
Gpc4-201ENSMUST00000033450 ClspnQ80YR7 1315 aa15.91■□□□□ 0.14
Gpc4-201ENSMUST00000033450 Top2bQ64511 1612 aa15.88■□□□□ 0.13
Gpc4-201ENSMUST00000033450 Aplp2Q06335 707 aa15.88■□□□□ 0.13
Gpc4-201ENSMUST00000033450 Phldb1Q6PDH0 1371 aaKnown RBP15.83■□□□□ 0.12
Gpc4-201ENSMUST00000033450 Rapgef2Q8CHG7 1496 aa15.8■□□□□ 0.12
Gpc4-201ENSMUST00000033450 Gm38655A0A286YDK6 273 aa15.79■□□□□ 0.12
Gpc4-201ENSMUST00000033450 CenpbP27790 599 aa15.77■□□□□ 0.11
Gpc4-201ENSMUST00000033450 Unc13aQ4KUS2 1712 aa15.77■□□□□ 0.11
Gpc4-201ENSMUST00000033450 Dnajc5P60904 198 aa15.74■□□□□ 0.11
Gpc4-201ENSMUST00000033450 TonslQ6NZL6 1363 aa15.73■□□□□ 0.11
Gpc4-201ENSMUST00000033450 Myt1Q8CFC2 1127 aa15.67■□□□□ 0.1
Gpc4-201ENSMUST00000033450 Cep162Q6ZQ06 1403 aa15.67■□□□□ 0.1
Gpc4-201ENSMUST00000033450 Myt1lP97500 1187 aa15.65■□□□□ 0.1
Gpc4-201ENSMUST00000033450 Mrc2Q64449 1479 aa15.64■□□□□ 0.09
Gpc4-201ENSMUST00000033450 Top2aQ01320 1528 aaKnown RBP15.63■□□□□ 0.09
Gpc4-201ENSMUST00000033450 Ubl4bQ9CQ84 188 aa15.63■□□□□ 0.09
Gpc4-201ENSMUST00000033450 Fmn1Q05860 1466 aa15.62■□□□□ 0.09
Gpc4-201ENSMUST00000033450 Kif15Q6P9L6 1387 aa15.61■□□□□ 0.09
Gpc4-201ENSMUST00000033450 Ncapd3Q6ZQK0 1506 aa15.58■□□□□ 0.08
Gpc4-201ENSMUST00000033450 Plekhg3Q4VAC9 1341 aa15.57■□□□□ 0.08
Gpc4-201ENSMUST00000033450 Lamc3Q9R0B6 1581 aa15.54■□□□□ 0.08
Gpc4-201ENSMUST00000033450 Il27Q8K3I6 234 aa15.54■□□□□ 0.08
Gpc4-201ENSMUST00000033450 TnnQ80Z71 1560 aa15.54■□□□□ 0.08
Gpc4-201ENSMUST00000033450 Clip1Q922J3 1391 aa15.51■□□□□ 0.07
Gpc4-201ENSMUST00000033450 Hnrnpul2Q00PI9 745 aaKnown RBP15.5■□□□□ 0.07
Gpc4-201ENSMUST00000033450 Eif4g1Q6NZJ6 1600 aaKnown RBP15.49■□□□□ 0.07
Gpc4-201ENSMUST00000033450 SafbD3YXK2 937 aaKnown RBP15.48■□□□□ 0.07
Gpc4-201ENSMUST00000033450 Npm2Q80W85 207 aa15.45■□□□□ 0.06
Gpc4-201ENSMUST00000033450 Cux2P70298 1426 aa15.45■□□□□ 0.06
Gpc4-201ENSMUST00000033450 Fam71e1A1L3C1 212 aa15.43■□□□□ 0.06
Gpc4-201ENSMUST00000033450 Mapk8ip2Q9ERE9 830 aa15.43■□□□□ 0.06
Gpc4-201ENSMUST00000033450 Eid3Q3V124 375 aa15.42■□□□□ 0.06
Gpc4-201ENSMUST00000033450 Kdm5bQ80Y84 1544 aa15.41■□□□□ 0.06
Gpc4-201ENSMUST00000033450 Ap3b1Q9Z1T1 1105 aa15.4■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms