RNA–Protein interactions for RNA: ENSMUST00000031167.5

Polr2b-201, Transcript of DNA-directed RNA polymerase II subunit RPB2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Polr2b, Length 4,145 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2b-201ENSMUST00000031167 NischQ80TM9 1593 aa15.19■□□□□ 0.02
Polr2b-201ENSMUST00000031167 Gm35339A0A140LHH9 1649 aa14.82□□□□□ -0.04
Polr2b-201ENSMUST00000031167 Abcc9P70170 1546 aa14.65□□□□□ -0.06
Polr2b-201ENSMUST00000031167 Abcc8B2RUS7 1588 aa14.47□□□□□ -0.09
Polr2b-201ENSMUST00000031167 Rhox8Q6VSS7 320 aa14.16□□□□□ -0.14
Polr2b-201ENSMUST00000031167 ScribQ80U72 1612 aa13.64□□□□□ -0.23
Polr2b-201ENSMUST00000031167 Kdm5dQ62240 1548 aa13.36□□□□□ -0.27
Polr2b-201ENSMUST00000031167 Rb1cc1Q9ESK9 1588 aa13.28□□□□□ -0.28
Polr2b-201ENSMUST00000031167 Dcaf1Q80TR8 1506 aa13.28□□□□□ -0.28
Polr2b-201ENSMUST00000031167 NacadQ5SWP3 1504 aa13.27□□□□□ -0.29
Polr2b-201ENSMUST00000031167 Ccdc136Q3TVA9 1136 aa13.18□□□□□ -0.3
Polr2b-201ENSMUST00000031167 Baz1aO88379 1555 aa13.07□□□□□ -0.32
Polr2b-201ENSMUST00000031167 Zcchc6Q5BLK4 1491 aaKnown RBP13.07□□□□□ -0.32
Polr2b-201ENSMUST00000031167 Rtl1Q7M732 1744 aa13.04□□□□□ -0.32
Polr2b-201ENSMUST00000031167 Sycp2Q9CUU3 1500 aa12.99□□□□□ -0.33
Polr2b-201ENSMUST00000031167 Ccdc180J3QNE4 1664 aa12.86□□□□□ -0.35
Polr2b-201ENSMUST00000031167 Crybg2B7ZCC2 1516 aa12.78□□□□□ -0.36
Polr2b-201ENSMUST00000031167 BicraF8VPZ9 1578 aa12.75□□□□□ -0.37
Polr2b-201ENSMUST00000031167 Trim41Q5NCC3 630 aa12.73□□□□□ -0.37
Polr2b-201ENSMUST00000031167 Smarca2Q6DIC0 1577 aa12.72□□□□□ -0.37
Polr2b-201ENSMUST00000031167 Cecr2E9Q2Z1 1453 aa12.68□□□□□ -0.38
Polr2b-201ENSMUST00000031167 Cngb1E1AZ71 1325 aa12.61□□□□□ -0.39
Polr2b-201ENSMUST00000031167 Esf1Q3V1V3 845 aaKnown RBP12.58□□□□□ -0.4
Polr2b-201ENSMUST00000031167 Brd4Q9ESU6 1400 aaKnown RBP12.5□□□□□ -0.41
Polr2b-201ENSMUST00000031167 HrcG5E8J6 738 aa12.45□□□□□ -0.42
Polr2b-201ENSMUST00000031167 Synj1Q8CHC4 1574 aa12.43□□□□□ -0.42
Polr2b-201ENSMUST00000031167 CftrP26361 1476 aa12.39□□□□□ -0.43
Polr2b-201ENSMUST00000031167 Chic1Q8CBW7 227 aa12.37□□□□□ -0.43
Polr2b-201ENSMUST00000031167 Smarca4Q3TKT4 1613 aaKnown RBP12.36□□□□□ -0.43
Polr2b-201ENSMUST00000031167 Gab3Q8BSM5 595 aa12.35□□□□□ -0.43
Polr2b-201ENSMUST00000031167 Ehmt2Q9Z148 1263 aaKnown RBP12.31□□□□□ -0.44
Polr2b-201ENSMUST00000031167 Pds5bQ4VA53 1446 aaKnown RBP12.28□□□□□ -0.44
Polr2b-201ENSMUST00000031167 Golga3P55937 1487 aa12.28□□□□□ -0.44
Polr2b-201ENSMUST00000031167 Atad2bE9Q166 1460 aaKnown RBP12.28□□□□□ -0.44
Polr2b-201ENSMUST00000031167 Iqgap2Q3UQ44 1575 aa12.26□□□□□ -0.45
Polr2b-201ENSMUST00000031167 Rsf1E9PWW9 1441 aaKnown RBP12.25□□□□□ -0.45
Polr2b-201ENSMUST00000031167 Cttnbp2B9EJA2 1648 aa12.24□□□□□ -0.45
Polr2b-201ENSMUST00000031167 Ccdc88bQ4QRL3 1481 aa12.23□□□□□ -0.45
Polr2b-201ENSMUST00000031167 Cep164Q5DU05 1446 aa12.17□□□□□ -0.46
Polr2b-201ENSMUST00000031167 Il27Q8K3I6 234 aa12.13□□□□□ -0.47
Polr2b-201ENSMUST00000031167 Frmpd1A2AKB4 1549 aa12.09□□□□□ -0.47
Polr2b-201ENSMUST00000031167 Ercc6F8VPZ5 1481 aa12.09□□□□□ -0.47
Polr2b-201ENSMUST00000031167 Cc2d2aQ8CFW7 1633 aa12.05□□□□□ -0.48
Polr2b-201ENSMUST00000031167 Top2bQ64511 1612 aa12.05□□□□□ -0.48
Polr2b-201ENSMUST00000031167 Wdr62Q3U3T8 1523 aa12.03□□□□□ -0.48
Polr2b-201ENSMUST00000031167 Ubl4bQ9CQ84 188 aa12.01□□□□□ -0.49
Polr2b-201ENSMUST00000031167 Dnajc5bQ9CQ94 199 aa12.01□□□□□ -0.49
Polr2b-201ENSMUST00000031167 Kif15Q6P9L6 1387 aa12□□□□□ -0.49
Polr2b-201ENSMUST00000031167 Myt1lP97500 1187 aa11.99□□□□□ -0.49
Polr2b-201ENSMUST00000031167 Npm2Q80W85 207 aa11.99□□□□□ -0.49
Polr2b-201ENSMUST00000031167 Fmn1Q05860 1466 aa11.98□□□□□ -0.49
Polr2b-201ENSMUST00000031167 Phldb1Q6PDH0 1371 aaKnown RBP11.91□□□□□ -0.5
Polr2b-201ENSMUST00000031167 Thoc2B1AZI6 1594 aaKnown RBP11.88□□□□□ -0.51
Polr2b-201ENSMUST00000031167 Npm1Q61937 292 aaKnown RBP11.87□□□□□ -0.51
Polr2b-201ENSMUST00000031167 Zeb1Q64318 1117 aa11.85□□□□□ -0.51
Polr2b-201ENSMUST00000031167 Top2aQ01320 1528 aaKnown RBP11.83□□□□□ -0.52
Polr2b-201ENSMUST00000031167 Cux2P70298 1426 aa11.83□□□□□ -0.52
Polr2b-201ENSMUST00000031167 Unc13aQ4KUS2 1712 aa11.83□□□□□ -0.52
Polr2b-201ENSMUST00000031167 Rapgef2Q8CHG7 1496 aa11.79□□□□□ -0.52
Polr2b-201ENSMUST00000031167 Lamc3Q9R0B6 1581 aa11.79□□□□□ -0.52
Polr2b-201ENSMUST00000031167 Ccdc18Q640L5 1455 aa11.76□□□□□ -0.53
Polr2b-201ENSMUST00000031167 TnnQ80Z71 1560 aa11.76□□□□□ -0.53
Polr2b-201ENSMUST00000031167 PtprkP35822 1457 aa11.75□□□□□ -0.53
Polr2b-201ENSMUST00000031167 Cep162Q6ZQ06 1403 aa11.74□□□□□ -0.53
Polr2b-201ENSMUST00000031167 Acin1Q9JIX8 1338 aaKnown RBP11.72□□□□□ -0.53
Polr2b-201ENSMUST00000031167 Fam135aQ6NS59 1506 aa11.71□□□□□ -0.53
Polr2b-201ENSMUST00000031167 Ap3b1Q9Z1T1 1105 aa11.71□□□□□ -0.54
Polr2b-201ENSMUST00000031167 Camsap1A2AHC3 1581 aa11.71□□□□□ -0.54
Polr2b-201ENSMUST00000031167 UbtfP25976 765 aaKnown RBP11.68□□□□□ -0.54
Polr2b-201ENSMUST00000031167 LrpprcQ6PB66 1392 aaKnown RBP11.65□□□□□ -0.54
Polr2b-201ENSMUST00000031167 Plekhg3Q4VAC9 1341 aa11.64□□□□□ -0.55
Polr2b-201ENSMUST00000031167 Grin2bQ01097 1482 aa11.64□□□□□ -0.55
Polr2b-201ENSMUST00000031167 Dhx29Q6PGC1 1365 aaKnown RBP11.61□□□□□ -0.55
Polr2b-201ENSMUST00000031167 Clip1Q922J3 1391 aa11.61□□□□□ -0.55
Polr2b-201ENSMUST00000031167 Shroom4Q1W617 1475 aa11.6□□□□□ -0.55
Polr2b-201ENSMUST00000031167 Arhgap35Q91YM2 1499 aa11.6□□□□□ -0.55
Polr2b-201ENSMUST00000031167 Mrc2Q64449 1479 aa11.59□□□□□ -0.55
Polr2b-201ENSMUST00000031167 Baz1bQ9Z277 1479 aa11.59□□□□□ -0.55
Polr2b-201ENSMUST00000031167 NrkQ9R0G8 1455 aa11.58□□□□□ -0.56
Polr2b-201ENSMUST00000031167 Duox2A2AQ99 1517 aa11.57□□□□□ -0.56
Polr2b-201ENSMUST00000031167 PogzQ8BZH4 1409 aaKnown RBP11.56□□□□□ -0.56
Polr2b-201ENSMUST00000031167 Rpgrip1Q9EPQ2 1331 aa11.56□□□□□ -0.56
Polr2b-201ENSMUST00000031167 Mier1Q5UAK0 511 aa11.54□□□□□ -0.56
Polr2b-201ENSMUST00000031167 Setd5Q5XJV7 1441 aa11.52□□□□□ -0.57
Polr2b-201ENSMUST00000031167 Efcab5A0JP43 1406 aa11.52□□□□□ -0.57
Polr2b-201ENSMUST00000031167 Rad54l2Q99NG0 1466 aa11.52□□□□□ -0.57
Polr2b-201ENSMUST00000031167 Lmod2Q3UHZ5 550 aa11.5□□□□□ -0.57
Polr2b-201ENSMUST00000031167 Mroh2bQ7M6Y6 1581 aa11.49□□□□□ -0.57
Polr2b-201ENSMUST00000031167 Kif21aQ9QXL2 1672 aa11.49□□□□□ -0.57
Polr2b-201ENSMUST00000031167 Eif4g1Q6NZJ6 1600 aaKnown RBP11.48□□□□□ -0.57
Polr2b-201ENSMUST00000031167 Eea1Q8BL66 1411 aa11.47□□□□□ -0.57
Polr2b-201ENSMUST00000031167 Plb1Q3TTY0 1478 aa11.46□□□□□ -0.57
Polr2b-201ENSMUST00000031167 Samd9lQ69Z37 1561 aa11.44□□□□□ -0.58
Polr2b-201ENSMUST00000031167 Crocc2F6XLV1 1638 aa11.43□□□□□ -0.58
Polr2b-201ENSMUST00000031167 Urb2E9Q7L1 1524 aaKnown RBP11.42□□□□□ -0.58
Polr2b-201ENSMUST00000031167 Arap1Q4LDD4 1452 aa11.42□□□□□ -0.58
Polr2b-201ENSMUST00000031167 Carmil1Q6EDY6 1374 aa11.41□□□□□ -0.58
Polr2b-201ENSMUST00000031167 Map3k1P53349 1493 aa11.41□□□□□ -0.58
Polr2b-201ENSMUST00000031167 BlmO88700 1416 aa11.38□□□□□ -0.59
Polr2b-201ENSMUST00000031167 Cux1P53564 1515 aa11.37□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms