RNA–Protein interactions for RNA: ENSMUST00000029574.12

Vcam1-201, Transcript of Vascular cell adhesion protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcam1, Length 3,469 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1-201ENSMUST00000029574 Gm35339A0A140LHH9 1649 aa11.18□□□□□ -0.62
Vcam1-201ENSMUST00000029574 NischQ80TM9 1593 aa10.83□□□□□ -0.68
Vcam1-201ENSMUST00000029574 Abcc9P70170 1546 aa10.63□□□□□ -0.71
Vcam1-201ENSMUST00000029574 Abcc8B2RUS7 1588 aa10.49□□□□□ -0.73
Vcam1-201ENSMUST00000029574 Chic1Q8CBW7 227 aa9.99□□□□□ -0.81
Vcam1-201ENSMUST00000029574 ScribQ80U72 1612 aa9.97□□□□□ -0.81
Vcam1-201ENSMUST00000029574 Dcaf1Q80TR8 1506 aa9.89□□□□□ -0.83
Vcam1-201ENSMUST00000029574 Ccdc180J3QNE4 1664 aa9.71□□□□□ -0.85
Vcam1-201ENSMUST00000029574 Kdm5dQ62240 1548 aa9.61□□□□□ -0.87
Vcam1-201ENSMUST00000029574 NacadQ5SWP3 1504 aa9.59□□□□□ -0.87
Vcam1-201ENSMUST00000029574 Crybg2B7ZCC2 1516 aa9.48□□□□□ -0.89
Vcam1-201ENSMUST00000029574 Sycp2Q9CUU3 1500 aa9.43□□□□□ -0.9
Vcam1-201ENSMUST00000029574 Rb1cc1Q9ESK9 1588 aa9.43□□□□□ -0.9
Vcam1-201ENSMUST00000029574 Baz1aO88379 1555 aa9.39□□□□□ -0.91
Vcam1-201ENSMUST00000029574 Mapk8ip2Q9ERE9 830 aa9.39□□□□□ -0.91
Vcam1-201ENSMUST00000029574 Rtl1Q7M732 1744 aa9.35□□□□□ -0.91
Vcam1-201ENSMUST00000029574 BicraF8VPZ9 1578 aa9.3□□□□□ -0.92
Vcam1-201ENSMUST00000029574 Smarca2Q6DIC0 1577 aa9.21□□□□□ -0.93
Vcam1-201ENSMUST00000029574 Phf23Q8BSN5 401 aa9.21□□□□□ -0.94
Vcam1-201ENSMUST00000029574 Zcchc6Q5BLK4 1491 aaKnown RBP9.16□□□□□ -0.94
Vcam1-201ENSMUST00000029574 Plppr3Q7TPB0 716 aa9.05□□□□□ -0.96
Vcam1-201ENSMUST00000029574 Rhox8Q6VSS7 320 aa9.03□□□□□ -0.96
Vcam1-201ENSMUST00000029574 Rpgrip1Q9EPQ2 1331 aa9.01□□□□□ -0.97
Vcam1-201ENSMUST00000029574 Cecr2E9Q2Z1 1453 aa8.92□□□□□ -0.98
Vcam1-201ENSMUST00000029574 Smarca4Q3TKT4 1613 aaKnown RBP8.9□□□□□ -0.98
Vcam1-201ENSMUST00000029574 DiexfQ8BTT6 772 aaKnown RBP8.9□□□□□ -0.98
Vcam1-201ENSMUST00000029574 Pcgf6Q99NA9 353 aa8.88□□□□□ -0.99
Vcam1-201ENSMUST00000029574 Atad2bE9Q166 1460 aaKnown RBP8.83□□□□□ -1
Vcam1-201ENSMUST00000029574 Cttnbp2B9EJA2 1648 aa8.82□□□□□ -1
Vcam1-201ENSMUST00000029574 Synj1Q8CHC4 1574 aa8.81□□□□□ -1
Vcam1-201ENSMUST00000029574 Pds5bQ4VA53 1446 aaKnown RBP8.8□□□□□ -1
Vcam1-201ENSMUST00000029574 CftrP26361 1476 aa8.8□□□□□ -1
Vcam1-201ENSMUST00000029574 Thoc2B1AZI6 1594 aaKnown RBP8.8□□□□□ -1
Vcam1-201ENSMUST00000029574 Myt1Q8CFC2 1127 aa8.79□□□□□ -1
Vcam1-201ENSMUST00000029574 Iqgap2Q3UQ44 1575 aa8.79□□□□□ -1
Vcam1-201ENSMUST00000029574 Gab3Q8BSM5 595 aa8.77□□□□□ -1.01
Vcam1-201ENSMUST00000029574 Brd4Q9ESU6 1400 aaKnown RBP8.76□□□□□ -1.01
Vcam1-201ENSMUST00000029574 Top2bQ64511 1612 aa8.75□□□□□ -1.01
Vcam1-201ENSMUST00000029574 Wdr62Q3U3T8 1523 aa8.73□□□□□ -1.01
Vcam1-201ENSMUST00000029574 Kcna4Q61423 654 aa8.7□□□□□ -1.02
Vcam1-201ENSMUST00000029574 Unc13aQ4KUS2 1712 aa8.69□□□□□ -1.02
Vcam1-201ENSMUST00000029574 CenpbP27790 599 aa8.69□□□□□ -1.02
Vcam1-201ENSMUST00000029574 Frmpd1A2AKB4 1549 aa8.67□□□□□ -1.02
Vcam1-201ENSMUST00000029574 Baz1bQ9Z277 1479 aa8.65□□□□□ -1.02
Vcam1-201ENSMUST00000029574 TnnQ80Z71 1560 aa8.64□□□□□ -1.03
Vcam1-201ENSMUST00000029574 Fam135aQ6NS59 1506 aa8.63□□□□□ -1.03
Vcam1-201ENSMUST00000029574 Las1lA2BE28 776 aaKnown RBP8.61□□□□□ -1.03
Vcam1-201ENSMUST00000029574 Bcl11aQ9QYE3 773 aa8.6□□□□□ -1.03
Vcam1-201ENSMUST00000029574 Golga3P55937 1487 aa8.59□□□□□ -1.03
Vcam1-201ENSMUST00000029574 Amer1Q7TS75 1132 aa8.59□□□□□ -1.04
Vcam1-201ENSMUST00000029574 Lamc3Q9R0B6 1581 aa8.56□□□□□ -1.04
Vcam1-201ENSMUST00000029574 Trim41Q5NCC3 630 aa8.55□□□□□ -1.04
Vcam1-201ENSMUST00000029574 HrcG5E8J6 738 aa8.54□□□□□ -1.04
Vcam1-201ENSMUST00000029574 Senp3Q9EP97 568 aaKnown RBP8.53□□□□□ -1.04
Vcam1-201ENSMUST00000029574 Ercc6F8VPZ5 1481 aa8.52□□□□□ -1.05
Vcam1-201ENSMUST00000029574 Cc2d2aQ8CFW7 1633 aa8.5□□□□□ -1.05
Vcam1-201ENSMUST00000029574 Ccdc136Q3TVA9 1136 aa8.5□□□□□ -1.05
Vcam1-201ENSMUST00000029574 Fmn1Q05860 1466 aa8.46□□□□□ -1.05
Vcam1-201ENSMUST00000029574 Top2aQ01320 1528 aaKnown RBP8.45□□□□□ -1.06
Vcam1-201ENSMUST00000029574 Phldb1Q6PDH0 1371 aaKnown RBP8.45□□□□□ -1.06
Vcam1-201ENSMUST00000029574 Rsf1E9PWW9 1441 aaKnown RBP8.45□□□□□ -1.06
Vcam1-201ENSMUST00000029574 Acin1Q9JIX8 1338 aaKnown RBP8.42□□□□□ -1.06
Vcam1-201ENSMUST00000029574 Cep164Q5DU05 1446 aa8.41□□□□□ -1.06
Vcam1-201ENSMUST00000029574 Ccdc88bQ4QRL3 1481 aa8.41□□□□□ -1.06
Vcam1-201ENSMUST00000029574 PrkcshO08795 521 aa8.41□□□□□ -1.06
Vcam1-201ENSMUST00000029574 Neurod1Q60867 357 aa8.4□□□□□ -1.06
Vcam1-201ENSMUST00000029574 Eif4g1Q6NZJ6 1600 aaKnown RBP8.4□□□□□ -1.06
Vcam1-201ENSMUST00000029574 1700123L14RikQ3V2K7 440 aa8.39□□□□□ -1.07
Vcam1-201ENSMUST00000029574 Gpatch8A2A6A1 1505 aa8.38□□□□□ -1.07
Vcam1-201ENSMUST00000029574 Ube2uB1AUC4 352 aa8.37□□□□□ -1.07
Vcam1-201ENSMUST00000029574 Camsap1A2AHC3 1581 aa8.37□□□□□ -1.07
Vcam1-201ENSMUST00000029574 NrkQ9R0G8 1455 aa8.29□□□□□ -1.08
Vcam1-201ENSMUST00000029574 Dnajc5bQ9CQ94 199 aa8.29□□□□□ -1.08
Vcam1-201ENSMUST00000029574 Rapgef2Q8CHG7 1496 aa8.29□□□□□ -1.08
Vcam1-201ENSMUST00000029574 Grin2bQ01097 1482 aa8.26□□□□□ -1.09
Vcam1-201ENSMUST00000029574 Mrc2Q64449 1479 aa8.26□□□□□ -1.09
Vcam1-201ENSMUST00000029574 Kif21aQ9QXL2 1672 aa8.22□□□□□ -1.09
Vcam1-201ENSMUST00000029574 Kif15Q6P9L6 1387 aa8.22□□□□□ -1.09
Vcam1-201ENSMUST00000029574 Cux2P70298 1426 aa8.21□□□□□ -1.1
Vcam1-201ENSMUST00000029574 Shroom4Q1W617 1475 aa8.2□□□□□ -1.1
Vcam1-201ENSMUST00000029574 PogzQ8BZH4 1409 aaKnown RBP8.2□□□□□ -1.1
Vcam1-201ENSMUST00000029574 Map3k1P53349 1493 aa8.19□□□□□ -1.1
Vcam1-201ENSMUST00000029574 PtprkP35822 1457 aa8.18□□□□□ -1.1
Vcam1-201ENSMUST00000029574 Efcab5A0JP43 1406 aa8.18□□□□□ -1.1
Vcam1-201ENSMUST00000029574 Ccdc18Q640L5 1455 aa8.18□□□□□ -1.1
Vcam1-201ENSMUST00000029574 AqrQ8CFQ3 1481 aaKnown RBP8.17□□□□□ -1.1
Vcam1-201ENSMUST00000029574 CatipB9EKE5 520 aa8.16□□□□□ -1.1
Vcam1-201ENSMUST00000029574 Supt5hO55201 1082 aaKnown RBP8.16□□□□□ -1.1
Vcam1-201ENSMUST00000029574 Csrnp3P59055 597 aa8.15□□□□□ -1.1
Vcam1-201ENSMUST00000029574 Esf1Q3V1V3 845 aaKnown RBP8.15□□□□□ -1.1
Vcam1-201ENSMUST00000029574 Arhgap35Q91YM2 1499 aa8.14□□□□□ -1.11
Vcam1-201ENSMUST00000029574 LrpprcQ6PB66 1392 aaKnown RBP8.14□□□□□ -1.11
Vcam1-201ENSMUST00000029574 Pbrm1Q8BSQ9 1634 aaKnown RBP8.14□□□□□ -1.11
Vcam1-201ENSMUST00000029574 Samd9lQ69Z37 1561 aa8.13□□□□□ -1.11
Vcam1-201ENSMUST00000029574 Mroh2bQ7M6Y6 1581 aa8.13□□□□□ -1.11
Vcam1-201ENSMUST00000029574 Ubl4bQ9CQ84 188 aa8.13□□□□□ -1.11
Vcam1-201ENSMUST00000029574 Crocc2F6XLV1 1638 aa8.13□□□□□ -1.11
Vcam1-201ENSMUST00000029574 Duox2A2AQ99 1517 aa8.13□□□□□ -1.11
Vcam1-201ENSMUST00000029574 Lrriq1Q0P5X1 1673 aa8.12□□□□□ -1.11
Vcam1-201ENSMUST00000029574 Aplp2Q06335 707 aa8.12□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms