RNA–Protein interactions for RNA: ENSMUST00000021056.7

Scn4a-201, Transcript of Sodium channel protein type 4 subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn4a, Length 6,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4a-201ENSMUST00000021056 Rhox8Q6VSS7 320 aa16.58■□□□□ 0.25
Scn4a-201ENSMUST00000021056 Cngb1E1AZ71 1325 aa15.47■□□□□ 0.07
Scn4a-201ENSMUST00000021056 Pelp1Q9DBD5 1123 aaKnown RBP15.43■□□□□ 0.06
Scn4a-201ENSMUST00000021056 Amer1Q7TS75 1132 aa15.32■□□□□ 0.04
Scn4a-201ENSMUST00000021056 Las1lA2BE28 776 aaKnown RBP15.28■□□□□ 0.04
Scn4a-201ENSMUST00000021056 Rpgrip1Q9EPQ2 1331 aa15.23■□□□□ 0.03
Scn4a-201ENSMUST00000021056 Ehmt2Q9Z148 1263 aaKnown RBP14.98□□□□□ -0.01
Scn4a-201ENSMUST00000021056 Ube2uB1AUC4 352 aa14.97□□□□□ -0.01
Scn4a-201ENSMUST00000021056 Wdr66E9Q743 1299 aa14.97□□□□□ -0.01
Scn4a-201ENSMUST00000021056 Esf1Q3V1V3 845 aaKnown RBP14.94□□□□□ -0.02
Scn4a-201ENSMUST00000021056 Zeb1Q64318 1117 aa14.91□□□□□ -0.02
Scn4a-201ENSMUST00000021056 4930567H17RikQ3V0K5 233 aa14.83□□□□□ -0.04
Scn4a-201ENSMUST00000021056 Npm2Q80W85 207 aa14.59□□□□□ -0.07
Scn4a-201ENSMUST00000021056 NischQ80TM9 1593 aa14.53□□□□□ -0.08
Scn4a-201ENSMUST00000021056 Ttbk1Q6PCN3 1308 aa14.49□□□□□ -0.09
Scn4a-201ENSMUST00000021056 CenpbP27790 599 aa14.48□□□□□ -0.09
Scn4a-201ENSMUST00000021056 Ccdc136Q3TVA9 1136 aa14.48□□□□□ -0.09
Scn4a-201ENSMUST00000021056 Myt1lP97500 1187 aa14.33□□□□□ -0.11
Scn4a-201ENSMUST00000021056 Gab3Q8BSM5 595 aa14.33□□□□□ -0.12
Scn4a-201ENSMUST00000021056 4933416C03RikQ3V063 378 aa14.3□□□□□ -0.12
Scn4a-201ENSMUST00000021056 Gm35339A0A140LHH9 1649 aa14.29□□□□□ -0.12
Scn4a-201ENSMUST00000021056 Slc24a1Q91WD8 1130 aa14.23□□□□□ -0.13
Scn4a-201ENSMUST00000021056 Abcc9P70170 1546 aa14.14□□□□□ -0.15
Scn4a-201ENSMUST00000021056 Trim41Q5NCC3 630 aa14.09□□□□□ -0.15
Scn4a-201ENSMUST00000021056 Il27Q8K3I6 234 aa14□□□□□ -0.17
Scn4a-201ENSMUST00000021056 Stra8P70278 393 aa14□□□□□ -0.17
Scn4a-201ENSMUST00000021056 Os9Q8K2C7 672 aa13.88□□□□□ -0.19
Scn4a-201ENSMUST00000021056 Abcc8B2RUS7 1588 aa13.88□□□□□ -0.19
Scn4a-201ENSMUST00000021056 Myt1Q8CFC2 1127 aa13.8□□□□□ -0.2
Scn4a-201ENSMUST00000021056 Gm13697A2AK42 830 aa13.8□□□□□ -0.2
Scn4a-201ENSMUST00000021056 NeflP08551 543 aa13.75□□□□□ -0.21
Scn4a-201ENSMUST00000021056 Eif5bQ05D44 1216 aaKnown RBP13.72□□□□□ -0.21
Scn4a-201ENSMUST00000021056 Plppr3Q7TPB0 716 aa13.69□□□□□ -0.22
Scn4a-201ENSMUST00000021056 Ifnlr1Q8CGK5 535 aa13.68□□□□□ -0.22
Scn4a-201ENSMUST00000021056 UbtfP25976 765 aaKnown RBP13.67□□□□□ -0.22
Scn4a-201ENSMUST00000021056 HrcG5E8J6 738 aa13.67□□□□□ -0.22
Scn4a-201ENSMUST00000021056 NrdcQ8BHG1 1161 aa13.62□□□□□ -0.23
Scn4a-201ENSMUST00000021056 Cdk11bP24788 784 aaKnown RBP13.6□□□□□ -0.23
Scn4a-201ENSMUST00000021056 Neurod1Q60867 357 aa13.59□□□□□ -0.23
Scn4a-201ENSMUST00000021056 Ap3b1Q9Z1T1 1105 aa13.59□□□□□ -0.23
Scn4a-201ENSMUST00000021056 CatipB9EKE5 520 aa13.57□□□□□ -0.24
Scn4a-201ENSMUST00000021056 Anp32bQ9EST5 272 aaKnown RBP13.55□□□□□ -0.24
Scn4a-201ENSMUST00000021056 NefmP08553 848 aa13.53□□□□□ -0.24
Scn4a-201ENSMUST00000021056 Chic1Q8CBW7 227 aa13.52□□□□□ -0.25
Scn4a-201ENSMUST00000021056 DiexfQ8BTT6 772 aaKnown RBP13.51□□□□□ -0.25
Scn4a-201ENSMUST00000021056 Zbtb7cQ8VCZ7 619 aa13.51□□□□□ -0.25
Scn4a-201ENSMUST00000021056 Tnnt3Q9QZ47 272 aa13.5□□□□□ -0.25
Scn4a-201ENSMUST00000021056 Fam50aQ9WV03 339 aaKnown RBP13.49□□□□□ -0.25
Scn4a-201ENSMUST00000021056 NclP09405 707 aaKnown RBP13.48□□□□□ -0.25
Scn4a-201ENSMUST00000021056 Gm13695A2AK44 830 aa13.46□□□□□ -0.25
Scn4a-201ENSMUST00000021056 Atp1b4Q99ME6 356 aa13.45□□□□□ -0.26
Scn4a-201ENSMUST00000021056 DaxxO35613 739 aa13.44□□□□□ -0.26
Scn4a-201ENSMUST00000021056 Acin1Q9JIX8 1338 aaKnown RBP13.42□□□□□ -0.26
Scn4a-201ENSMUST00000021056 Rtl5Q5DTT4 599 aa13.42□□□□□ -0.26
Scn4a-201ENSMUST00000021056 Hnrnpul2Q00PI9 745 aaKnown RBP13.41□□□□□ -0.26
Scn4a-201ENSMUST00000021056 Ythdc1E9Q5K9 736 aaKnown RBP13.35□□□□□ -0.27
Scn4a-201ENSMUST00000021056 Ppargc1bQ8VHJ7 1014 aa13.34□□□□□ -0.27
Scn4a-201ENSMUST00000021056 Nop58Q6DFW4 536 aaKnown RBP13.34□□□□□ -0.27
Scn4a-201ENSMUST00000021056 Lmod3E9QA62 571 aa13.32□□□□□ -0.28
Scn4a-201ENSMUST00000021056 Npm1Q61937 292 aaKnown RBP13.32□□□□□ -0.28
Scn4a-201ENSMUST00000021056 Erich6D3Z6S9 713 aa13.28□□□□□ -0.28
Scn4a-201ENSMUST00000021056 Dcaf1Q80TR8 1506 aa13.28□□□□□ -0.28
Scn4a-201ENSMUST00000021056 ArxO35085 564 aa13.25□□□□□ -0.29
Scn4a-201ENSMUST00000021056 Safb2Q80YR5 991 aaKnown RBP13.25□□□□□ -0.29
Scn4a-201ENSMUST00000021056 Fkbp15Q6P9Q6 1216 aaKnown RBP13.19□□□□□ -0.3
Scn4a-201ENSMUST00000021056 Pcgf6Q99NA9 353 aa13.16□□□□□ -0.3
Scn4a-201ENSMUST00000021056 Upf2A2AT37 1269 aaKnown RBP13.14□□□□□ -0.31
Scn4a-201ENSMUST00000021056 Zcchc6Q5BLK4 1491 aaKnown RBP13.14□□□□□ -0.31
Scn4a-201ENSMUST00000021056 Prdm10Q3UTQ7 1184 aa13.12□□□□□ -0.31
Scn4a-201ENSMUST00000021056 Zbtb4Q5F293 982 aa13.11□□□□□ -0.31
Scn4a-201ENSMUST00000021056 Polr3glQ8R0C0 218 aa13.07□□□□□ -0.32
Scn4a-201ENSMUST00000021056 Lmod2Q3UHZ5 550 aa13.06□□□□□ -0.32
Scn4a-201ENSMUST00000021056 Hsp90aa1P07901 733 aaKnown RBP13.06□□□□□ -0.32
Scn4a-201ENSMUST00000021056 Anp32aO35381 247 aa13.05□□□□□ -0.32
Scn4a-201ENSMUST00000021056 Nlrp6Q91WS2 869 aa13.04□□□□□ -0.32
Scn4a-201ENSMUST00000021056 Rtl1Q7M732 1744 aa12.96□□□□□ -0.33
Scn4a-201ENSMUST00000021056 Vsig10D3YX43 558 aa12.93□□□□□ -0.34
Scn4a-201ENSMUST00000021056 Supt5hO55201 1082 aaKnown RBP12.91□□□□□ -0.34
Scn4a-201ENSMUST00000021056 TonslQ6NZL6 1363 aa12.91□□□□□ -0.34
Scn4a-201ENSMUST00000021056 Hdac5Q9Z2V6 1113 aa12.91□□□□□ -0.34
Scn4a-201ENSMUST00000021056 Gm38655A0A286YDK6 273 aa12.9□□□□□ -0.34
Scn4a-201ENSMUST00000021056 NacadQ5SWP3 1504 aa12.89□□□□□ -0.35
Scn4a-201ENSMUST00000021056 P3h3Q8CG70 732 aa12.88□□□□□ -0.35
Scn4a-201ENSMUST00000021056 Csrnp3P59055 597 aa12.88□□□□□ -0.35
Scn4a-201ENSMUST00000021056 DekQ7TNV0 380 aaKnown RBP12.88□□□□□ -0.35
Scn4a-201ENSMUST00000021056 Rangap1P46061 589 aaKnown RBP12.86□□□□□ -0.35
Scn4a-201ENSMUST00000021056 MyclP10166 368 aa12.85□□□□□ -0.35
Scn4a-201ENSMUST00000021056 Ubl4bQ9CQ84 188 aa12.81□□□□□ -0.36
Scn4a-201ENSMUST00000021056 Crybg2B7ZCC2 1516 aa12.77□□□□□ -0.37
Scn4a-201ENSMUST00000021056 Trim44Q9QXA7 346 aa12.76□□□□□ -0.37
Scn4a-201ENSMUST00000021056 Znf326O88291 580 aa12.74□□□□□ -0.37
Scn4a-201ENSMUST00000021056 ScribQ80U72 1612 aa12.72□□□□□ -0.37
Scn4a-201ENSMUST00000021056 Znf316Q6PGE4 1016 aa12.71□□□□□ -0.37
Scn4a-201ENSMUST00000021056 Mapk8ip2Q9ERE9 830 aa12.69□□□□□ -0.38
Scn4a-201ENSMUST00000021056 Ccdc180J3QNE4 1664 aa12.69□□□□□ -0.38
Scn4a-201ENSMUST00000021056 Plekhg3Q4VAC9 1341 aa12.69□□□□□ -0.38
Scn4a-201ENSMUST00000021056 Ggt6Q6PDE7 497 aa12.68□□□□□ -0.38
Scn4a-201ENSMUST00000021056 Irx6Q9ER75 438 aa12.67□□□□□ -0.38
Scn4a-201ENSMUST00000021056 Baz1aO88379 1555 aa12.66□□□□□ -0.38
Scn4a-201ENSMUST00000021056 Kdm5dQ62240 1548 aa12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms