RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 ZNF648Q5T619 568 aaPredicted RBP13.58□□□□□ -0.24
CACNA1C-231ENST00000616390 Q6ZNB5 142 aa13.58□□□□□ -0.24
CACNA1C-231ENST00000616390 TUBA1AQ71U36 451 aa13.58□□□□□ -0.24
CACNA1C-231ENST00000616390 C11orf74Q86VG3 221 aa13.58□□□□□ -0.24
CACNA1C-231ENST00000616390 PROSER1Q86XN7 944 aa13.58□□□□□ -0.24
CACNA1C-231ENST00000616390 OR2AP1Q8NGE2 309 aa13.58□□□□□ -0.24
CACNA1C-231ENST00000616390 CDC26Q8NHZ8 85 aa13.58□□□□□ -0.24
CACNA1C-231ENST00000616390 TMBIM1Q969X1 311 aa13.58□□□□□ -0.24
CACNA1C-231ENST00000616390 ZNF583Q96ND8 569 aa13.58□□□□□ -0.24
CACNA1C-231ENST00000616390 OR52E6Q96RD3 313 aa13.58□□□□□ -0.24
CACNA1C-231ENST00000616390 BDH2Q9BUT1 245 aa13.58□□□□□ -0.24
CACNA1C-231ENST00000616390 ATG10Q9H0Y0 220 aa13.58□□□□□ -0.24
CACNA1C-231ENST00000616390 LRTM1Q9HBL6 345 aa13.58□□□□□ -0.24
CACNA1C-231ENST00000616390 SLC6A13Q9NSD5 602 aa13.58□□□□□ -0.24
CACNA1C-231ENST00000616390 CCL26Q9Y258 94 aa13.58□□□□□ -0.24
CACNA1C-231ENST00000616390 CHD7Q9P2D1 2997 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 GNGT2O14610 69 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 ASLP04424 464 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 TCF3P15923 654 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 MYF6P23409 242 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 ELK4P28324 431 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 WEE1P30291 646 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 MTHFRP42898 656 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 CHRNB3Q05901 458 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 PGS1Q32NB8 556 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 CYBRD1Q53TN4 286 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 C10orf62Q5T681 223 aaPredicted RBP13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 SLC39A11Q8N1S5 342 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 BEND7Q8N7W2 519 aaPredicted RBP13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 MFSD2AQ8NA29 543 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 FAM162AQ96A26 154 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 ISG20Q96AZ6 181 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 CARS2Q9HA77 564 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 DNMT3BQ9UBC3 853 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 EBF1Q9UH73 591 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 U3KQV3 271 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 GOLGA4Q13439 2230 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 PDYNP01213 254 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 PGRP06401 933 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 ANXA6P08133 673 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 SRCP12931 536 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 ITPKAP23677 461 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 NEDD8Q15843 81 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 ADRM1Q16186 407 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 CDKN3Q16667 212 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 CACHD1Q5VU97 1274 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 GRAMD4Q6IC98 578 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 SULT1C3Q6IMI6 304 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 UBE2R2Q712K3 238 aaPredicted RBP13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 SPRED1Q7Z699 444 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 ITIH5Q86UX2 942 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 VRK3Q8IV63 474 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 SELENOMQ8WWX9 145 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 ACDQ96AP0 544 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 COPS8Q99627 209 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 ATXN10Q9UBB4 475 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 CDC14AQ9UNH5 594 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 CCL27Q9Y4X3 112 aa13.57□□□□□ -0.24
CACNA1C-231ENST00000616390 TMX2-CTNND1H3BSU7 103 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 MANBAO00462 879 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 TGM5O43548 720 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 LRG1P02750 347 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 ALBP02768 609 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 ANXA5P08758 320 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 LHCGRP22888 699 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 HLA-FP30511 346 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 PTSQ03393 145 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 CYP4F3Q08477 520 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 INAQ16352 499 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 FAM98BQ52LJ0 330 aaKnown RBP13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 TMEM53Q6P2H8 277 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 SERPINA13PQ6UXR4 307 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 DPY19L3Q6ZPD9 716 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 Q6ZVU0 165 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 GPR141Q7Z602 305 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 ZBTB46Q86UZ6 589 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 PACRGLQ8N7B6 248 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 CHST14Q8NCH0 376 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 FRS2Q8WU20 508 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 SLC22A17Q8WUG5 538 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 LZICQ8WZA0 190 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 GTF2H4Q92759 462 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 MUS81Q96NY9 551 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 HTATIP2Q9BUP3 242 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 BBS2Q9BXC9 721 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 SMURF2Q9HAU4 748 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 HPS4Q9NQG7 708 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 HCFC1R1Q9NWW0 138 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 MAGEL2Q9UJ55 1249 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 PADI4Q9UM07 663 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 INVSQ9Y283 1065 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 DLGAP4Q9Y2H0 992 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 PCDHB3Q9Y5E6 796 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 NEDD8-MDP1E9PL57 170 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 CCL16O15467 120 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 WDR47O94967 919 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 UMPSP11172 480 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 PRKACGP22612 351 aa13.56□□□□□ -0.24
CACNA1C-231ENST00000616390 RPS3P23396 243 aaKnown RBP eCLIP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms