RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 K7EM74 188 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 NIPSNAP2O75323 286 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 APOA4P06727 396 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 CYP2A7P20853 494 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 PTPN4P29074 926 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 RORAP35398 523 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 MAGEA6P43360 314 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 CDK16Q00536 496 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 PLOD1Q02809 727 aaPredicted RBP17.4■□□□□ 0.38
SRSF1-208ENST00000584773 CYP1B1Q16678 543 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 CRTC2Q53ET0 693 aaPredicted RBP17.4■□□□□ 0.38
SRSF1-208ENST00000584773 DNAJC21Q5F1R6 531 aaKnown RBP17.4■□□□□ 0.38
SRSF1-208ENST00000584773 CASC4Q6P4E1 433 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 CCDC137Q6PK04 289 aaKnown RBP17.4■□□□□ 0.38
SRSF1-208ENST00000584773 HOOK3Q86VS8 718 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 DSELQ8IZU8 1212 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 AGGF1Q8N302 714 aaeCLIP17.4■□□□□ 0.38
SRSF1-208ENST00000584773 LPGAT1Q92604 370 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 ABHD17AQ96GS6 310 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 BIRC8Q96P09 236 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 TSSK1BQ9BXA7 367 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 ACTR5Q9H9F9 607 aaPredicted RBP17.4■□□□□ 0.38
SRSF1-208ENST00000584773 GALPQ9UBC7 116 aa17.4■□□□□ 0.38
SRSF1-208ENST00000584773 TENM4Q6N022 2769 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 CCDC88CQ9P219 2028 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 A0A0J9YY10 115 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 USP27XA6NNY8 438 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 F8W8V4 182 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 AP3B1O00203 1094 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 MEN1O00255 615 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 PGRMC1O00264 195 aaKnown RBP17.39■□□□□ 0.37
SRSF1-208ENST00000584773 ZNF749O43361 778 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 DNAJB5O75953 348 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 SLCO2B1O94956 709 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 SFTPCP11686 197 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 RPS3P23396 243 aaKnown RBP eCLIP17.39■□□□□ 0.372e-8■■■□□ 17.7
SRSF1-208ENST00000584773 GABRA4P48169 554 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 ITGA1P56199 1179 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 CHAF1BQ13112 559 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 TMED2Q15363 201 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 KYNUQ16719 465 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 ZNF517Q6ZMY9 492 aaPredicted RBP17.39■□□□□ 0.37
SRSF1-208ENST00000584773 C9orf43Q8TAL5 461 aaPredicted RBP17.39■□□□□ 0.37
SRSF1-208ENST00000584773 ZNF669Q96BR6 464 aaPredicted RBP17.39■□□□□ 0.37
SRSF1-208ENST00000584773 SPRTNQ9H040 489 aaPredicted RBP17.39■□□□□ 0.37
SRSF1-208ENST00000584773 OR6C2Q9NZP2 312 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 POLHQ9Y253 713 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 FARSAQ9Y285 508 aaKnown RBP17.39■□□□□ 0.37
SRSF1-208ENST00000584773 CRYL1Q9Y2S2 319 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 MED13Q9UHV7 2174 aa17.39■□□□□ 0.37
SRSF1-208ENST00000584773 TNRC6AQ8NDV7 1962 aaKnown RBP17.38■□□□□ 0.37
SRSF1-208ENST00000584773 PCSK5Q92824 1860 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 H3BMH7 237 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 SUV39H1O43463 412 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 CAPN1P07384 714 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 RAB28P51157 221 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 TYSND1Q2T9J0 566 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 CPZQ66K79 652 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 KIAA0930Q6ICG6 404 aaPredicted RBP17.38■□□□□ 0.37
SRSF1-208ENST00000584773 CNSTQ6PJW8 725 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 FAM198BQ6UWH4 519 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 CENPUQ71F23 418 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 DCUN1D3Q8IWE4 304 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 SYTL1Q8IYJ3 562 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 ENDOVQ8N8Q3 282 aaKnown RBP17.38■□□□□ 0.37
SRSF1-208ENST00000584773 SKA2Q8WVK7 121 aaPredicted RBP17.38■□□□□ 0.37
SRSF1-208ENST00000584773 SERPINB12Q96P63 405 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 PANX3Q96QZ0 392 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 TRIM55Q9BYV6 548 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 SERTAD3Q9UJW9 196 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 TP53TG5Q9Y2B4 290 aa17.38■□□□□ 0.37
SRSF1-208ENST00000584773 E7EQ34 232 aa17.37■□□□□ 0.37
SRSF1-208ENST00000584773 PHF2O75151 1096 aa17.37■□□□□ 0.37
SRSF1-208ENST00000584773 KLK3P07288 261 aaPredicted RBP17.37■□□□□ 0.37
SRSF1-208ENST00000584773 MSL3P1P0C860 447 aa17.37■□□□□ 0.37
SRSF1-208ENST00000584773 MAGP20916 626 aa17.37■□□□□ 0.37
SRSF1-208ENST00000584773 RPS15P62841 145 aaKnown RBP17.37■□□□□ 0.37
SRSF1-208ENST00000584773 SLC5A12Q1EHB4 618 aa17.37■□□□□ 0.37
SRSF1-208ENST00000584773 C1orf189Q5VU69 101 aa17.37■□□□□ 0.37
SRSF1-208ENST00000584773 MRNIPQ6NTE8 343 aa17.37■□□□□ 0.37
SRSF1-208ENST00000584773 UNC5DQ6UXZ4 953 aa17.37■□□□□ 0.37
SRSF1-208ENST00000584773 OTOAQ7RTW8 1153 aa17.37■□□□□ 0.37
SRSF1-208ENST00000584773 LRFN5Q96NI6 719 aa17.37■□□□□ 0.37
SRSF1-208ENST00000584773 SLC7A5P2Q9GIP4 190 aa17.37■□□□□ 0.37
SRSF1-208ENST00000584773 SYTL2Q9HCH5 934 aa17.37■□□□□ 0.37
SRSF1-208ENST00000584773 TUBD1Q9UJT1 453 aa17.37■□□□□ 0.37
SRSF1-208ENST00000584773 SNX12Q9UMY4 172 aa17.37■□□□□ 0.37
SRSF1-208ENST00000584773 MAN2B2Q9Y2E5 1009 aa17.37■□□□□ 0.37
SRSF1-208ENST00000584773 MAP3K7O43318 606 aa17.36■□□□□ 0.37
SRSF1-208ENST00000584773 OR2B3O76000 313 aa17.36■□□□□ 0.37
SRSF1-208ENST00000584773 C1orf105O95561 183 aa17.36■□□□□ 0.37
SRSF1-208ENST00000584773 CBSLP0DN79 551 aa17.36■□□□□ 0.37
SRSF1-208ENST00000584773 CD9P21926 228 aa17.36■□□□□ 0.37
SRSF1-208ENST00000584773 PSMB5P28074 263 aa17.36■□□□□ 0.37
SRSF1-208ENST00000584773 CBSP35520 551 aa17.36■□□□□ 0.37
SRSF1-208ENST00000584773 FOXL2P58012 376 aa17.36■□□□□ 0.37
SRSF1-208ENST00000584773 SARNPP82979 210 aaKnown RBP17.36■□□□□ 0.37
SRSF1-208ENST00000584773 DHX34Q14147 1143 aaKnown RBP17.36■□□□□ 0.37
SRSF1-208ENST00000584773 KIR2DS3Q14952 304 aa17.36■□□□□ 0.37
SRSF1-208ENST00000584773 UGT8Q16880 541 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms