RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 GOLGA8TH3BQL2 631 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 NDC80O14777 642 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 USP1O94782 785 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 EBLN1P0CF75 366 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 ARNTP27540 789 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 PDHA2P29803 388 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 PREPP48147 710 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 ARCN1P48444 511 aaKnown RBP15.53■□□□□ 0.08
VAPA-204ENST00000577901 ACY1Q03154 408 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 BOP1Q14137 746 aaKnown RBP15.53■□□□□ 0.08
VAPA-204ENST00000577901 MORF4L2Q15014 288 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 BRD3Q15059 726 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 UGT8Q16880 541 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 NEPROQ6NW34 567 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 DUS1LQ6P1R4 473 aaKnown RBP15.53■□□□□ 0.08
VAPA-204ENST00000577901 FAM199XQ6PEV8 388 aaPredicted RBP15.53■□□□□ 0.08
VAPA-204ENST00000577901 MAATS1Q7Z4T9 603 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 BPHLQ86WA6 291 aaPredicted RBP15.53■□□□□ 0.08
VAPA-204ENST00000577901 SPATA4Q8NEY3 305 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 THAP4Q8WY91 577 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 TFGQ92734 400 aaPredicted RBP15.53■□□□□ 0.08
VAPA-204ENST00000577901 PANX3Q96QZ0 392 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 NAT9Q9BTE0 207 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 KIR3DX1Q9H7L2 352 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 AKIRIN1Q9H9L7 192 aaPredicted RBP15.53■□□□□ 0.08
VAPA-204ENST00000577901 SLC24A2Q9UI40 661 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 VPS9D1Q9Y2B5 631 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 UBA6A0AVT1 1052 aaPredicted RBP15.52■□□□□ 0.08
VAPA-204ENST00000577901 SLC5A10A0PJK1 596 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 KPNA5O15131 536 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 APOA4P06727 396 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 OGNP20774 298 aaKnown RBP15.52■□□□□ 0.08
VAPA-204ENST00000577901 RPS3P23396 243 aaKnown RBP eCLIP15.52■□□□□ 0.081e-18■■■□□ 15.9
VAPA-204ENST00000577901 IVDP26440 423 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 PTPN4P29074 926 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 UQCRFS1P47985 274 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 ARL4DP49703 201 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 PGDP52209 483 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 RPS18P62269 152 aaKnown RBP15.52■□□□□ 0.08
VAPA-204ENST00000577901 RPS15P62841 145 aaKnown RBP15.52■□□□□ 0.08
VAPA-204ENST00000577901 TYSND1Q2T9J0 566 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 ARMC6Q6NXE6 501 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 PDIK1LQ8N165 341 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 EFCAB3Q8N7B9 438 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 BBOF1Q8ND07 529 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 ACVR1CQ8NER5 493 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 ASZ1Q8WWH4 475 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 SNF8Q96H20 258 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 MAP3K3Q99759 626 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 P2RY12Q9H244 342 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 MVB12BQ9H7P6 319 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 FGF21Q9NSA1 209 aa15.52■□□□□ 0.08
VAPA-204ENST00000577901 USP9XQ93008 2570 aaPredicted RBP15.51■□□□□ 0.07
VAPA-204ENST00000577901 ZCWPW2A0A1B0GU75 182 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 IQCF5A8MTL0 148 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 EFCAB8A8MWE9 144 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 H3BMM5 538 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 AGFG2O95081 481 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 TTC4O95801 387 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 PGAM1P18669 254 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 GNLYP22749 145 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 CCR7P32248 378 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 ADARP55265 1226 aaKnown RBP15.51■□□□□ 0.07
VAPA-204ENST00000577901 EIF3BP55884 814 aaKnown RBP15.51■□□□□ 0.07
VAPA-204ENST00000577901 HSPA14Q0VDF9 509 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 TMED2Q15363 201 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 LONRF1Q17RB8 773 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 DNTTIP2Q5QJE6 756 aaKnown RBP15.51■□□□□ 0.07
VAPA-204ENST00000577901 CPZQ66K79 652 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 HIBCHQ6NVY1 386 aaPredicted RBP15.51■□□□□ 0.07
VAPA-204ENST00000577901 SYVN1Q86TM6 617 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 OOSP2Q86WS3 158 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 KMT5CQ86Y97 462 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 CILP2Q8IUL8 1156 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 LMNTD2Q8IXW0 634 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 AGGF1Q8N302 714 aaeCLIP15.51■□□□□ 0.07
VAPA-204ENST00000577901 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.51■□□□□ 0.071e-12■■■■■ 60.9
VAPA-204ENST00000577901 GALNT11Q8NCW6 608 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 PHC3Q8NDX5 983 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 GABPB2Q8TAK5 448 aaPredicted RBP15.51■□□□□ 0.07
VAPA-204ENST00000577901 GSDMBQ8TAX9 411 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 CPT1CQ8TCG5 803 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 CALML6Q8TD86 181 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 TRIM44Q96DX7 344 aaPredicted RBP15.51■□□□□ 0.07
VAPA-204ENST00000577901 C16orf45Q96MC5 204 aaPredicted RBP15.51■□□□□ 0.07
VAPA-204ENST00000577901 CD180Q99467 661 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 EBNA1BP2Q99848 306 aaKnown RBP15.51■□□□□ 0.07
VAPA-204ENST00000577901 TRIM56Q9BRZ2 755 aaKnown RBP15.51■□□□□ 0.07
VAPA-204ENST00000577901 TRIM51Q9BSJ1 452 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 SLC25A23Q9BV35 468 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 TRIM31Q9BZY9 425 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 C20orf96Q9NUD7 363 aaPredicted RBP15.51■□□□□ 0.07
VAPA-204ENST00000577901 INTS10Q9NVR2 710 aaKnown RBP15.51■□□□□ 0.07
VAPA-204ENST00000577901 HRASLS2Q9NWW9 162 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 ASF1AQ9Y294 204 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 FAM169AQ9Y6X4 670 aa15.51■□□□□ 0.07
VAPA-204ENST00000577901 OR5K3A6NET4 321 aa15.5■□□□□ 0.07
VAPA-204ENST00000577901 FAM187AA6NFU0 413 aa15.5■□□□□ 0.07
VAPA-204ENST00000577901 TLCD2A6NGC4 264 aa15.5■□□□□ 0.07
VAPA-204ENST00000577901 KDM1AO60341 852 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms