RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 SLC25A23Q9BV35 468 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 ING2Q9H160 280 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 HOMER3Q9NSC5 361 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 TREX1Q9NSU2 369 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 PLAGL1Q9UM63 463 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 CDYLQ9Y232 598 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 PCDHGA9Q9Y5G4 932 aaKnown RBP19.47■□□□□ 0.71
CLN6-207ENST00000566347 HECTD1Q9ULT8 2610 aa19.47■□□□□ 0.71
CLN6-207ENST00000566347 AOAHP28039 575 aa19.46■□□□□ 0.71
CLN6-207ENST00000566347 PKLRP30613 574 aa19.46■□□□□ 0.71
CLN6-207ENST00000566347 PTGIRP43119 386 aa19.46■□□□□ 0.71
CLN6-207ENST00000566347 PGDP52209 483 aa19.46■□□□□ 0.71
CLN6-207ENST00000566347 CDK16Q00536 496 aa19.46■□□□□ 0.71
CLN6-207ENST00000566347 ZIC1Q15915 447 aa19.46■□□□□ 0.71
CLN6-207ENST00000566347 KYNUQ16719 465 aa19.46■□□□□ 0.71
CLN6-207ENST00000566347 PTRHD1Q6GMV3 140 aaKnown RBP19.46■□□□□ 0.71
CLN6-207ENST00000566347 LRRC6Q86X45 466 aa19.46■□□□□ 0.71
CLN6-207ENST00000566347 GSDMBQ8TAX9 411 aa19.46■□□□□ 0.71
CLN6-207ENST00000566347 SLC22A18Q96BI1 424 aa19.46■□□□□ 0.71
CLN6-207ENST00000566347 PANX3Q96QZ0 392 aa19.46■□□□□ 0.71
CLN6-207ENST00000566347 GNPTGQ9UJJ9 305 aa19.46■□□□□ 0.71
CLN6-207ENST00000566347 MED13Q9UHV7 2174 aa19.45■□□□□ 0.7
CLN6-207ENST00000566347 IQCF5A8MTL0 148 aa19.45■□□□□ 0.7
CLN6-207ENST00000566347 H3BMH7 237 aa19.45■□□□□ 0.7
CLN6-207ENST00000566347 TMEM63AO94886 807 aa19.45■□□□□ 0.7
CLN6-207ENST00000566347 SLCO2B1O94956 709 aa19.45■□□□□ 0.7
CLN6-207ENST00000566347 GABRA4P48169 554 aa19.45■□□□□ 0.7
CLN6-207ENST00000566347 CCL11P51671 97 aa19.45■□□□□ 0.7
CLN6-207ENST00000566347 IGFBP7Q16270 282 aa19.45■□□□□ 0.7
CLN6-207ENST00000566347 DEFB110Q30KQ9 67 aa19.45■□□□□ 0.7
CLN6-207ENST00000566347 ZNF385CQ66K41 422 aaPredicted RBP19.45■□□□□ 0.7
CLN6-207ENST00000566347 RHBDD2Q6NTF9 364 aa19.45■□□□□ 0.7
CLN6-207ENST00000566347 TLDC1Q6P9B6 456 aa19.45■□□□□ 0.7
CLN6-207ENST00000566347 LDB1Q86U70 411 aaPredicted RBP19.45■□□□□ 0.7
CLN6-207ENST00000566347 VRK3Q8IV63 474 aa19.45■□□□□ 0.7
CLN6-207ENST00000566347 PROKR1Q8TCW9 393 aa19.45■□□□□ 0.7
CLN6-207ENST00000566347 LKAAEAR1Q8TD35 194 aa19.45■□□□□ 0.7
CLN6-207ENST00000566347 MLXIPLQ9NP71 852 aa19.45■□□□□ 0.7
CLN6-207ENST00000566347 MARCH4Q9P2E8 410 aaPredicted RBP19.45■□□□□ 0.7
CLN6-207ENST00000566347 G3BP2Q9UN86 482 aaKnown RBP19.45■□□□□ 0.7
CLN6-207ENST00000566347 SRPK3Q9UPE1 567 aa19.45■□□□□ 0.7
CLN6-207ENST00000566347 SNRNP200O75643 2136 aaKnown RBP19.45■□□□□ 0.7
CLN6-207ENST00000566347 PTPN13Q12923 2485 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 KPNA5O15131 536 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 ZSCAN9O15535 394 aaPredicted RBP19.44■□□□□ 0.7
CLN6-207ENST00000566347 NDUFS3O75489 264 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 PDGFAP04085 211 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 CD63P08962 238 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 TPSB2P20231 275 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 RPS3P23396 243 aaKnown RBP eCLIP19.44■□□□□ 0.7
CLN6-207ENST00000566347 PEBP1P30086 187 aaKnown RBP19.44■□□□□ 0.7
CLN6-207ENST00000566347 RRADP55042 308 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 CRADDP78560 199 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 CHAF1BQ13112 559 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 TPSAB1Q15661 275 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 PAPD7Q5XG87 772 aaKnown RBP19.44■□□□□ 0.7
CLN6-207ENST00000566347 TTC23LQ6PF05 361 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 MED25Q71SY5 747 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 RAB43Q86YS6 212 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 KRT222Q8N1A0 295 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 DNAJC22Q8N4W6 341 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 TMEM102Q8N9M5 508 aaPredicted RBP19.44■□□□□ 0.7
CLN6-207ENST00000566347 CFAP61Q8NHU2 1237 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 RAB11FIP5Q9BXF6 653 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 SPRTNQ9H040 489 aaPredicted RBP19.44■□□□□ 0.7
CLN6-207ENST00000566347 P2RY12Q9H244 342 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 MRM3Q9HC36 420 aaKnown RBP19.44■□□□□ 0.7
CLN6-207ENST00000566347 GPN3Q9UHW5 284 aaPredicted RBP19.44■□□□□ 0.7
CLN6-207ENST00000566347 PLCL2Q9UPR0 1127 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 PCDHGB7Q9Y5F8 929 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 MRFAP1Q9Y605 127 aa19.44■□□□□ 0.7
CLN6-207ENST00000566347 NRDCO43847 1150 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 CEP104O60308 925 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 CEACAM4O75871 244 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 S1PR4O95977 384 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 CD9P21926 228 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 NMBRP28336 390 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 KCNJ1P48048 391 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 DCDP81605 110 aaKnown RBP19.43■□□□□ 0.7
CLN6-207ENST00000566347 COLEC12Q5KU26 742 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 ARMC3Q5W041 872 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 LRRC8BQ6P9F7 803 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 LRRC8AQ8IWT6 810 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 OTUD6BQ8N6M0 293 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 LINC01555Q8NAE3 123 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 IP6K3Q96PC2 410 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 MENTQ9BUN1 341 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 KIFC1Q9BW19 673 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 TXLNGQ9NUQ3 528 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 INTS7Q9NVH2 962 aaKnown RBP19.43■□□□□ 0.7
CLN6-207ENST00000566347 IRAK4Q9NWZ3 460 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 SLC39A10Q9ULF5 831 aa19.43■□□□□ 0.7
CLN6-207ENST00000566347 FER1L5A0AVI2 2057 aa19.42■□□□□ 0.7
CLN6-207ENST00000566347 RASGRF2O14827 1237 aa19.42■□□□□ 0.7
CLN6-207ENST00000566347 PFDN6O15212 129 aa19.42■□□□□ 0.7
CLN6-207ENST00000566347 HCRTR1O43613 425 aa19.42■□□□□ 0.7
CLN6-207ENST00000566347 CBSLP0DN79 551 aa19.42■□□□□ 0.7
CLN6-207ENST00000566347 MAGP20916 626 aa19.42■□□□□ 0.7
CLN6-207ENST00000566347 MGAT1P26572 445 aa19.42■□□□□ 0.7
CLN6-207ENST00000566347 CBSP35520 551 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms