RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 FAM9BQ8IZU0 186 aa4.37□□□□□ -1.71
LINC00560-201ENST00000564593 THAP8Q8NA92 274 aa4.37□□□□□ -1.71
LINC00560-201ENST00000564593 NPEPL1Q8NDH3 523 aa4.37□□□□□ -1.71
LINC00560-201ENST00000564593 IRGQQ8WZA9 623 aa4.37□□□□□ -1.71
LINC00560-201ENST00000564593 SCRN2Q96FV2 425 aa4.37□□□□□ -1.71
LINC00560-201ENST00000564593 PKP4Q99569 1192 aa4.37□□□□□ -1.71
LINC00560-201ENST00000564593 RTP3Q9BQQ7 232 aa4.37□□□□□ -1.71
LINC00560-201ENST00000564593 CDH20Q9HBT6 801 aa4.37□□□□□ -1.71
LINC00560-201ENST00000564593 ZBTB20Q9HC78 741 aaPredicted RBP4.37□□□□□ -1.71
LINC00560-201ENST00000564593 GKN1Q9NS71 199 aa4.37□□□□□ -1.71
LINC00560-201ENST00000564593 POLLQ9UGP5 575 aa4.37□□□□□ -1.71
LINC00560-201ENST00000564593 SLC7A7Q9UM01 511 aa4.37□□□□□ -1.71
LINC00560-201ENST00000564593 A0A1B0GUV1 79 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 KCNAB3O43448 404 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 BUB3O43684 328 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 RNASEH1O60930 286 aaKnown RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 GBAP04062 536 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 INHBAP08476 426 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 SAGP10523 405 aaPredicted RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 NR1D1P20393 614 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 JAK1P23458 1154 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 PSMA3P25788 255 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 MNDAP41218 407 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 CRKLP46109 303 aaKnown RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 CDH11P55287 796 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 ILF3Q12906 894 aaKnown RBP eCLIP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 DMP1Q13316 513 aaPredicted RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 CUL3Q13618 768 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 VEZF1Q14119 521 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 PHLDA2Q53GA4 152 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 C1QTNF12Q5T7M4 302 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 WBP2NLQ6ICG8 309 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 MOXD1Q6UVY6 613 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 ANO5Q75V66 913 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 SPATA21Q7Z572 469 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 ABI3BPQ7Z7G0 1075 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 ZNF554Q86TJ5 538 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 NFE4Q86UQ8 179 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 PLD3Q8IV08 490 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 SLC24A4Q8NFF2 622 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 OR2T12Q8NG77 320 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 KCNE4Q8WWG9 221 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 THOC1Q96FV9 657 aaKnown RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 ST6GAL2Q96JF0 529 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 JAKMIP1Q96N16 626 aaKnown RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 S1PR5Q9H228 398 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 FN3KQ9H479 309 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 TFB2MQ9H5Q4 396 aaKnown RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 ZNF701Q9NV72 531 aaPredicted RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 TAAR2Q9P1P5 351 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 RASAL2Q9UJF2 1139 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 SNX7Q9UNH6 387 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 HTR3EA5X5Y0 456 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 NR3C1P04150 777 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 CSN3P07498 182 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 HAPLN1P10915 354 aaPredicted RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 HSPA8P11142 646 aaKnown RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 GNAZP19086 355 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 TKTP29401 623 aaKnown RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 CTNNA1P35221 906 aaKnown RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 TNNT3P45378 269 aaPredicted RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 NR2C2P49116 596 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 UBASH3AP57075 661 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 ERVFC1-1P60608 527 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 SCN1BQ07699 218 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 MCMDC2Q4G0Z9 681 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 MPP7Q5T2T1 576 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 KIAA1161Q6NSJ0 714 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 GDPD4Q6W3E5 623 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 SPATA19Q7Z5L4 167 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 NUDT13Q86X67 352 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 TMEM139Q8IV31 216 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 FOXP4Q8IVH2 680 aaPredicted RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 FAM219AQ8IW50 185 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 DNAJC22Q8N4W6 341 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 RFLNBQ8N5W9 214 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 ANKRD13CQ8N6S4 541 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 OR1J1Q8NGS3 322 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 PSD2Q9BQI7 771 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 TRMT61BQ9BVS5 477 aaKnown RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 GTPBP2Q9BX10 602 aaKnown RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 XAB2Q9HCS7 855 aaKnown RBP4.36□□□□□ -1.71
LINC00560-201ENST00000564593 DONSONQ9NYP3 566 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 DAPK2Q9UIK4 370 aa4.36□□□□□ -1.71
LINC00560-201ENST00000564593 A0A087WV48 116 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 H0Y626 953 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 PSMA7O14818 248 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 PRKNO60260 465 aaPredicted RBP4.35□□□□□ -1.71
LINC00560-201ENST00000564593 SLU7O95391 586 aaKnown RBP4.35□□□□□ -1.71
LINC00560-201ENST00000564593 CRYAAP02489 173 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 F7P08709 466 aaPredicted RBP4.35□□□□□ -1.71
LINC00560-201ENST00000564593 PLA2G4BP0C869 781 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 FGF5P12034 268 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 ACAT1P24752 427 aaKnown RBP4.35□□□□□ -1.71
LINC00560-201ENST00000564593 PTGER4P35408 488 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 ZNF415Q09FC8 603 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 CA9Q16790 459 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 ACCSLQ4AC99 568 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms