RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 PTPRJQ12913 1337 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 LY75O60449 1722 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 SCN9AQ15858 1988 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 MFSD2BA6NFX1 497 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 DNASE2O00115 360 aaPredicted RBP9.36□□□□□ -0.91
SIX4-202ENST00000554079 ANKRD28O15084 1053 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 PDE9AO76083 593 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 RECQL5O94762 991 aaPredicted RBP9.36□□□□□ -0.91
SIX4-202ENST00000554079 MATN4O95460 622 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 POLBP06746 335 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 CSF3P09919 207 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 SLC35E2BP0CK96 405 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 POU2F1P14859 743 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 CSKP41240 450 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 WNT7BP56706 349 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 BCAR1P56945 870 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 MYL6P60660 151 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 MRPL28Q13084 256 aaKnown RBP9.36□□□□□ -0.91
SIX4-202ENST00000554079 NKX1-1Q15270 411 aaPredicted RBP9.36□□□□□ -0.91
SIX4-202ENST00000554079 TBCEQ15813 527 aaPredicted RBP9.36□□□□□ -0.91
SIX4-202ENST00000554079 TIGD6Q17RP2 521 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 RFX4Q33E94 735 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 PAN2Q504Q3 1202 aaKnown RBP9.36□□□□□ -0.91
SIX4-202ENST00000554079 FAM98BQ52LJ0 330 aaKnown RBP9.36□□□□□ -0.91
SIX4-202ENST00000554079 KLHL12Q53G59 568 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 FAM182BQ5T319 152 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 GPAT2Q6NUI2 795 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 B3GNT9Q6UX72 402 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 CUZD1Q86UP6 607 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 JAZF1Q86VZ6 243 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 OR5K1Q8NHB7 308 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 DNAJB14Q8TBM8 379 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 C3orf30Q96M34 536 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 TMEM74Q96NL1 305 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 GPR22Q99680 433 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 RTP3Q9BQQ7 232 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 EIF2B3Q9NR50 452 aaKnown RBP9.36□□□□□ -0.91
SIX4-202ENST00000554079 ABCB8Q9NUT2 735 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 SETD4Q9NVD3 440 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 UBQLN2Q9UHD9 624 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 ERVW-1Q9UQF0 538 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 DENND4AQ7Z401 1863 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 PMS2P1A4D2B8 440 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 SH3D21A4FU49 640 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 TUBAL3A6NHL2 446 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 ASB14A6NK59 587 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 PCDH17O14917 1159 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 MPC2O95563 127 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 MT-CO1P00395 513 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 FOSP01100 380 aaPredicted RBP9.35□□□□□ -0.91
SIX4-202ENST00000554079 IFNA7P01567 189 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 CD72P21854 359 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 POU1F1P28069 291 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 DCTP40126 519 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 GTF2A2P52657 109 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 RAB25P57735 213 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 UBXN2AP68543 259 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 CHRNB3Q05901 458 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 DSC1Q08554 894 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 KEAP1Q14145 624 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 MAD2L1BPQ15013 274 aaPredicted RBP9.35□□□□□ -0.91
SIX4-202ENST00000554079 GRIK4Q16099 956 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 MICAQ29983 383 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 GLYR1Q49A26 553 aaPredicted RBP9.35□□□□□ -0.91
SIX4-202ENST00000554079 GPR33Q49SQ1 333 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 HSD17B12Q53GQ0 312 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 RAB6CQ53S08 254 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 AHSA2Q719I0 299 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 NT5DC4Q86YG4 428 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 GHDCQ8N2G8 530 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 GPD1LQ8N335 351 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 FAM86B1Q8N7N1 296 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 AGBL3Q8NEM8 1001 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 OR52N1Q8NH53 320 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 PCDH19Q8TAB3 1148 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 ISG20Q96AZ6 181 aaKnown RBP9.35□□□□□ -0.91
SIX4-202ENST00000554079 ZC3HAV1LQ96H79 300 aaKnown RBP9.35□□□□□ -0.91
SIX4-202ENST00000554079 RBP7Q96R05 134 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 VAT1Q99536 393 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 MRPL57Q9BQC6 102 aaKnown RBP9.35□□□□□ -0.91
SIX4-202ENST00000554079 TTPALQ9BTX7 342 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 C1QTNF6Q9BXI9 259 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 RAB6CQ9H0N0 254 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 TRIM45Q9H8W5 580 aaPredicted RBP9.35□□□□□ -0.91
SIX4-202ENST00000554079 ZFP64Q9NPA5 681 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 RDH8Q9NYR8 311 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 MBD2Q9UBB5 411 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 MAGEL2Q9UJ55 1249 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 JAG2Q9Y219 1238 aa9.35□□□□□ -0.91
SIX4-202ENST00000554079 F5H423 210 aaPredicted RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 SLC30A4O14863 429 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 KIAA0513O60268 411 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 MITFO75030 526 aaPredicted RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 VPS26AO75436 327 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 STARD3NLO95772 234 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 CST1P01037 141 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 FABP1P07148 127 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 ANXA6P08133 673 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 FAM157BP0CG42 384 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 ZNF3P17036 446 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms