RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 LHX1P48742 406 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 ZNF84P51523 738 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 MAP3K7CLP57077 242 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 GCNT1Q02742 428 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 ENPEPQ07075 957 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 INCA1Q0VD86 236 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 TWF1Q12792 350 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 DLG2Q15700 870 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 KYNUQ16719 465 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 ANXA2RQ3ZCQ2 193 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 SLC8B1Q6J4K2 584 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 SUSD1Q6UWL2 747 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 PRPF39Q86UA1 669 aaKnown RBP3.76□□□□□ -1.81
APAF1-208ENST00000549007 KLBQ86Z14 1044 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 RFX6Q8HWS3 928 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 TERB1Q8NA31 727 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 AVL9Q8NBF6 648 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 ING5Q8WYH8 240 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 ACBD6Q9BR61 282 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 BDH2Q9BUT1 245 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 IFT27Q9BW83 186 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 CYP3A43Q9HB55 503 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 MSL2Q9HCI7 577 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 TRIM36Q9NQ86 728 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 KIAA1456Q9P272 454 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 CDH9Q9ULB4 789 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 REXO2Q9Y3B8 237 aaKnown RBP3.76□□□□□ -1.81
APAF1-208ENST00000549007 RNF114Q9Y508 228 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 YIPF1Q9Y548 306 aa3.76□□□□□ -1.81
APAF1-208ENST00000549007 VCANP13611 3396 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 TMCO5BA8MYB1 307 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 GCATO75600 419 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 PGFP49763 221 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 ZNF132P52740 706 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 YPEL5P62699 121 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 CFHR3Q02985 330 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 GPR17Q13304 367 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 PLD1Q13393 1074 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 CRYMQ14894 314 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 ERMARDQ5T6L9 678 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 C6orf163Q5TEZ5 329 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 LIN9Q5TKA1 542 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 KIAA1614Q5VZ46 1190 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 AMIGO2Q86SJ2 522 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 TRIM74Q86UV6 250 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 TRIM73Q86UV7 250 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 HAPLN4Q86UW8 402 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 DCP1BQ8IZD4 617 aaKnown RBP3.75□□□□□ -1.81
APAF1-208ENST00000549007 ZNF461Q8TAF7 563 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 TRIM2Q9C040 744 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 CD248Q9HCU0 757 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 CYTH4Q9UIA0 394 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 FBXW11Q9UKB1 542 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 TSPAN16Q9UKR8 245 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 INSL5Q9Y5Q6 135 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 NPIPB11E5RHQ5 1161 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 O00370 1275 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 SPRY1O43609 319 aaPredicted RBP3.75□□□□□ -1.81
APAF1-208ENST00000549007 SLCO2B1O94956 709 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 NFATC1O95644 943 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 RNPS1Q15287 305 aaKnown RBP3.75□□□□□ -1.81
APAF1-208ENST00000549007 RPE65Q16518 533 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 SYTL3Q4VX76 610 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 TDRD12Q587J7 1177 aaKnown RBP3.75□□□□□ -1.81
APAF1-208ENST00000549007 SPDYAQ5MJ70 313 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 PPM1LQ5SGD2 360 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 STXBP5Q5T5C0 1151 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 TEDDM1Q5T9Z0 273 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 SPECC1LQ69YQ0 1117 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 FAM171BQ6P995 826 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 TMEM154Q6P9G4 183 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 TMEM88Q6PEY1 159 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 SYCE2Q6PIF2 218 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 TRAT1Q6PIZ9 186 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 SARM1Q6SZW1 724 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 LCTLQ6UWM7 567 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 IL20RBQ6UXL0 311 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 GRASPQ7Z6J2 395 aaPredicted RBP3.75□□□□□ -1.81
APAF1-208ENST00000549007 CCDC25Q86WR0 208 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 VRK3Q8IV63 474 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 FAM71AQ8IYT1 594 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 CCDC170Q8IYT3 715 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 CADM3Q8N126 398 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 ZFAND2BQ8WV99 257 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 TCEAL4Q96EI5 215 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 PGAP3Q96FM1 320 aaPredicted RBP3.75□□□□□ -1.81
APAF1-208ENST00000549007 SIPA1Q96FS4 1042 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 FSD1LQ9BXM9 530 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 ZNF334Q9HCZ1 680 aaPredicted RBP3.75□□□□□ -1.81
APAF1-208ENST00000549007 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.75□□□□□ -1.81
APAF1-208ENST00000549007 SNX5Q9Y5X3 404 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 GOLGA6L10A0A0M3HER8 536 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 ARHGEF37A1IGU5 675 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 PROM1O43490 865 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 NXPH3O95157 252 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 ZWINTO95229 277 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 FTCDO95954 541 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 TPM3P06753 285 aa3.75□□□□□ -1.81
APAF1-208ENST00000549007 HAPLN1P10915 354 aaPredicted RBP3.75□□□□□ -1.81
APAF1-208ENST00000549007 EGR2P11161 476 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms