RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 SEC16AO15027 2179 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 PIKFYVEQ9Y2I7 2098 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 COL12A1Q99715 3063 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 H3BMH7 237 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 NDUFS3O75489 264 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 DNAJB5O75953 348 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 SLCO2B1O94956 709 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 CAPN1P07384 714 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 MAGEA6P43360 314 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 GABRA4P48169 554 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 CDK16Q00536 496 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 PTCHD3Q3KNS1 767 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 CCSMST1Q4G0I0 132 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 PTRHD1Q6GMV3 140 aaKnown RBP10.34□□□□□ -0.75
CHEK1-218ENST00000544373 DSELQ8IZU8 1212 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 C19orf47Q8N9M1 422 aaKnown RBP10.34□□□□□ -0.75
CHEK1-218ENST00000544373 C9orf43Q8TAL5 461 aaPredicted RBP10.34□□□□□ -0.75
CHEK1-218ENST00000544373 ASZ1Q8WWH4 475 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 CPT1BQ92523 772 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 MAGOHBQ96A72 148 aaKnown RBP10.34□□□□□ -0.75
CHEK1-218ENST00000544373 FAM136AQ96C01 138 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 CLIP3Q96DZ5 547 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 GPR87Q9BY21 358 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 TRIM55Q9BYV6 548 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 KCNF1Q9H3M0 494 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 ACTR5Q9H9F9 607 aaPredicted RBP10.34□□□□□ -0.75
CHEK1-218ENST00000544373 LATS2Q9NRM7 1088 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 GALPQ9UBC7 116 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 TUBD1Q9UJT1 453 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 POLHQ9Y253 713 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 NEU2Q9Y3R4 380 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 NFS1Q9Y697 457 aa10.34□□□□□ -0.75
CHEK1-218ENST00000544373 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.33□□□□□ -0.76
CHEK1-218ENST00000544373 ISM1B1AKI9 464 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 GOLGA8MH3BSY2 632 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 ZNF749O43361 778 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 APOA4P06727 396 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 MSL3P1P0C860 447 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 CYP2A7P20853 494 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 RPS3P23396 243 aaKnown RBP eCLIP10.33□□□□□ -0.763e-6■□□□□ 9.4
CHEK1-218ENST00000544373 PKLRP30613 574 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 FMO4P31512 558 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 PPARGP37231 505 aaPredicted RBP10.33□□□□□ -0.76
CHEK1-218ENST00000544373 COILP38432 576 aaPredicted RBP10.33□□□□□ -0.76
CHEK1-218ENST00000544373 RAB28P51157 221 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 EIF3BP55884 814 aaKnown RBP10.33□□□□□ -0.76
CHEK1-218ENST00000544373 ITGA1P56199 1179 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 RPS15P62841 145 aaKnown RBP10.33□□□□□ -0.76
CHEK1-218ENST00000544373 KYNUQ16719 465 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 DNAJC21Q5F1R6 531 aaKnown RBP10.33□□□□□ -0.76
CHEK1-218ENST00000544373 IZUMO3Q5VZ72 239 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 TAX1BP1Q86VP1 789 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 AGGF1Q8N302 714 aaeCLIP10.33□□□□□ -0.76
CHEK1-218ENST00000544373 SLC35F6Q8N357 371 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 OTUD6BQ8N6M0 293 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 ENDOVQ8N8Q3 282 aaKnown RBP10.33□□□□□ -0.76
CHEK1-218ENST00000544373 LPGAT1Q92604 370 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 TCTN2Q96GX1 697 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 PBKQ96KB5 322 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 LRFN5Q96NI6 719 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 GRPEL1Q9HAV7 217 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 FANCEQ9HB96 536 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 MRM3Q9HC36 420 aaKnown RBP10.33□□□□□ -0.76
CHEK1-218ENST00000544373 SERTAD3Q9UJW9 196 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 TLK1Q9UKI8 766 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 SOX13Q9UN79 622 aa10.33□□□□□ -0.76
CHEK1-218ENST00000544373 RP1L1Q8IWN7 2480 aaPredicted RBP10.32□□□□□ -0.76
CHEK1-218ENST00000544373 A0A0J9YY10 115 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 E7EQ34 232 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 AP3B1O00203 1094 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 ZNF185O15231 689 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 NRDCO43847 1150 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 NIPSNAP2O75323 286 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 RECKO95980 971 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 PDGFAP04085 211 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 KLK3P07288 261 aaPredicted RBP10.32□□□□□ -0.76
CHEK1-218ENST00000544373 CBSLP0DN79 551 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 CD9P21926 228 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 CBSP35520 551 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 FOXL2P58012 376 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 CHAF1BQ13112 559 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 UGT8Q16880 541 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 ZNF385CQ66K41 422 aaPredicted RBP10.32□□□□□ -0.76
CHEK1-218ENST00000544373 CPZQ66K79 652 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 CCDC137Q6PK04 289 aaKnown RBP10.32□□□□□ -0.76
CHEK1-218ENST00000544373 FAM198BQ6UWH4 519 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 ATG14Q6ZNE5 492 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 TMEM151BQ8IW70 566 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 SYTL1Q8IYJ3 562 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 DNAJC22Q8N4W6 341 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 TSSK1BQ9BXA7 367 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 SYTL2Q9HCH5 934 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 TRMT1Q9NXH9 659 aaKnown RBP10.32□□□□□ -0.76
CHEK1-218ENST00000544373 GNPTGQ9UJJ9 305 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 TSR3Q9UJK0 312 aaKnown RBP10.32□□□□□ -0.76
CHEK1-218ENST00000544373 TP53TG5Q9Y2B4 290 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 MAN2B2Q9Y2E5 1009 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 CRYL1Q9Y2S2 319 aa10.32□□□□□ -0.76
CHEK1-218ENST00000544373 F8W8V4 182 aa10.31□□□□□ -0.76
CHEK1-218ENST00000544373 MAP3K7O43318 606 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms