RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 RIBC2Q9H4K1 309 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 SP110Q9HB58 689 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 ZBTB20Q9HC78 741 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-215ENST00000536145 ITM2CQ9NQX7 267 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 ASAH2Q9NR71 780 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 ZNF277Q9NRM2 450 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-215ENST00000536145 SIRT5Q9NXA8 310 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 EHD3Q9NZN3 535 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 GALPQ9UBC7 116 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 AKT3Q9Y243 479 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 CRYL1Q9Y2S2 319 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 WBP11Q9Y2W2 641 aaKnown RBP6.78□□□□□ -1.32
CPSF7-215ENST00000536145 BOLA1Q9Y3E2 137 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 GPSM3Q9Y4H4 160 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 GMPPBQ9Y5P6 360 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 MCM3APO60318 1980 aa6.78□□□□□ -1.32
CPSF7-215ENST00000536145 PAPPA2Q9BXP8 1791 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 A0A096LPI6 279 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 PNMA8CA0A1B0GUJ8 204 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 NPEPPSL1A6NEC2 478 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 MOXD2PA6NHM9 499 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 CENPXA8MT69 81 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 PDZK1P1A8MUH7 402 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 CCRL2O00421 344 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 OR7A17O14581 309 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 CTDSP2O14595 271 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 GNGT2O14610 69 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 POLR1CO15160 346 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-215ENST00000536145 PCDHGA12O60330 932 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 GPR32O75388 356 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 PAGE1O75459 146 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 MFN2O95140 757 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 MED26O95402 600 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 SERPINA1P01009 418 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 MYCP01106 439 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-215ENST00000536145 APOA1P02647 267 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 ALPPP05187 535 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 RPLP0P05388 317 aaKnown RBP6.77□□□□□ -1.33
CPSF7-215ENST00000536145 YES1P07947 543 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 UBL4AP11441 157 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 MAGP20916 626 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 IGFBP6P24592 240 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-215ENST00000536145 EPHA2P29317 976 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 DNAJA1P31689 397 aaKnown RBP6.77□□□□□ -1.33
CPSF7-215ENST00000536145 CASP2P42575 452 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 CLK1P49759 484 aaKnown RBP6.77□□□□□ -1.33
CPSF7-215ENST00000536145 STC1P52823 247 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 LILRA4P59901 499 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 GPLD1P80108 840 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 CREMQ03060 361 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 TARDBPQ13148 414 aaKnown RBP eCLIP6.77□□□□□ -1.33
CPSF7-215ENST00000536145 DGCR6Q14129 220 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 SIM2Q14190 667 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-215ENST00000536145 PCSK7Q16549 785 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 NFE2Q16621 373 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-215ENST00000536145 SYT16Q17RD7 645 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 PROX2Q3B8N5 592 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 TTLL9Q3SXZ7 439 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 FBXO43Q4G163 708 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 RFTN2Q52LD8 501 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-215ENST00000536145 CEP78Q5JTW2 689 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 KIAA1614Q5VZ46 1190 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 OR4F3Q6IEY1 312 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 TMC5Q6UXY8 1006 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 GALNT5Q7Z7M9 940 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 NOXA1Q86UR1 476 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 RNF130Q86XS8 419 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 ZDHHC21Q8IVQ6 265 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 FBXO16Q8IX29 292 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-215ENST00000536145 FAM126BQ8IXS8 530 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 NIM1KQ8IY84 436 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 SYTL1Q8IYJ3 562 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 SLC38A6Q8IZM9 456 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 UMODL1-AS1Q8N2C9 162 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 RYBPQ8N488 228 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-215ENST00000536145 DNAJC22Q8N4W6 341 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 PAF1Q8N7H5 531 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 FNDC5Q8NAU1 212 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 DNAJB8Q8NHS0 232 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 GRPEL2Q8TAA5 225 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 SUN5Q8TC36 379 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 JPH3Q8WXH2 748 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-215ENST00000536145 EDEM1Q92611 657 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 GGHQ92820 318 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 UBE2FQ969M7 185 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 TRIM63Q969Q1 353 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 KLRG1Q96E93 195 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 SLC10A4Q96EP9 437 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 CDCA5Q96FF9 252 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 HRASLS5Q96KN8 279 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 WDFY2Q96P53 400 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 DEPDC7Q96QD5 511 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 MCCC1Q96RQ3 725 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-215ENST00000536145 SH3GL1Q99961 368 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 MED10Q9BTT4 135 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 GON7Q9BXV9 100 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 NUAK2Q9H093 628 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 OR51E2Q9H255 320 aa6.77□□□□□ -1.33
CPSF7-215ENST00000536145 NXF3Q9H4D5 531 aaKnown RBP6.77□□□□□ -1.33
CPSF7-215ENST00000536145 CLMPQ9H6B4 373 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms