RNA–Protein interactions for RNA: ENST00000528201.1

PACSIN3-204, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-204ENST00000528201 CLIP3Q96DZ5 547 aa23.11■■□□□ 1.29
PACSIN3-204ENST00000528201 TRIM55Q9BYV6 548 aa23.11■■□□□ 1.29
PACSIN3-204ENST00000528201 SOX13Q9UN79 622 aa23.11■■□□□ 1.29
PACSIN3-204ENST00000528201 RUVBL2Q9Y230 463 aaKnown RBP23.11■■□□□ 1.29
PACSIN3-204ENST00000528201 KLHL20Q9Y2M5 609 aa23.11■■□□□ 1.29
PACSIN3-204ENST00000528201 NEU2Q9Y3R4 380 aa23.11■■□□□ 1.29
PACSIN3-204ENST00000528201 A0A0J9YY10 115 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 KRT87PA6NCN2 255 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 F8W8V4 182 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 ZNF749O43361 778 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 APOA4P06727 396 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 ITGA1P56199 1179 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 RPS15P62841 145 aaKnown RBP23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 COLEC12Q5KU26 742 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 ZNF385CQ66K41 422 aaPredicted RBP23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 CPZQ66K79 652 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 SYVN1Q86TM6 617 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 REXO1L1PQ8IX06 675 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 SYTL1Q8IYJ3 562 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 ENDOVQ8N8Q3 282 aaKnown RBP23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 MAGOHBQ96A72 148 aaKnown RBP23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 BIRC8Q96P09 236 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 TSSK1BQ9BXA7 367 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 SPRTNQ9H040 489 aaPredicted RBP23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 SERTAD3Q9UJW9 196 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 TP53TG5Q9Y2B4 290 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 MAN2B2Q9Y2E5 1009 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 JRKLQ9Y4A0 524 aa23.1■■□□□ 1.29
PACSIN3-204ENST00000528201 MYO18BQ8IUG5 2567 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 SETXQ7Z333 2677 aaKnown RBP23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 ISM1B1AKI9 464 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 AP3B1O00203 1094 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 NDUFS3O75489 264 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 WISP1O95388 367 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 KRT14P02533 472 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 KLK3P07288 261 aaPredicted RBP23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 RPS3P23396 243 aaKnown RBP eCLIP23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 RAB28P51157 221 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 TYSND1Q2T9J0 566 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 UNC5DQ6UXZ4 953 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 SPNS2Q8IVW8 549 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 DCUN1D3Q8IWE4 304 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 COG1Q8WTW3 980 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 LPGAT1Q92604 370 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 TCTN2Q96GX1 697 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 CHRNA10Q9GZZ6 450 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 IL1RAPL1Q9NZN1 696 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 GNPTGQ9UJJ9 305 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 TLK1Q9UKI8 766 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 NFS1Q9Y697 457 aa23.09■■□□□ 1.29
PACSIN3-204ENST00000528201 E7EQ34 232 aa23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 PDGFAP04085 211 aa23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 F7P08709 466 aaPredicted RBP23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 RAB40ALP0C0E4 278 aa23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 COILP38432 576 aaPredicted RBP23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 EIF3BP55884 814 aaKnown RBP23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 CHAF1BQ13112 559 aa23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 KIR2DS3Q14952 304 aa23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 CYP1B1Q16678 543 aa23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 SLC5A12Q1EHB4 618 aa23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 CCSMST1Q4G0I0 132 aa23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 LACTB2Q53H82 288 aaPredicted RBP23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 TAX1BP1Q86VP1 789 aa23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 HOOK3Q86VS8 718 aa23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 LRRC6Q86X45 466 aa23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 APLFQ8IW19 511 aaPredicted RBP23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 DNAJC22Q8N4W6 341 aa23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 OTUD6BQ8N6M0 293 aa23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 ADAMTS17Q8TE56 1095 aa23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 PBKQ96KB5 322 aa23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 EPN3Q9H201 632 aa23.08■■□□□ 1.29
PACSIN3-204ENST00000528201 MAP3K7O43318 606 aa23.07■■□□□ 1.28
PACSIN3-204ENST00000528201 NRDCO43847 1150 aa23.07■■□□□ 1.28
PACSIN3-204ENST00000528201 NIPSNAP2O75323 286 aa23.07■■□□□ 1.28
PACSIN3-204ENST00000528201 RFPL1O75677 317 aa23.07■■□□□ 1.28
PACSIN3-204ENST00000528201 CD9P21926 228 aa23.07■■□□□ 1.28
PACSIN3-204ENST00000528201 FMO4P31512 558 aa23.07■■□□□ 1.28
PACSIN3-204ENST00000528201 TLE1Q04724 770 aa23.07■■□□□ 1.28
PACSIN3-204ENST00000528201 TMED2Q15363 201 aa23.07■■□□□ 1.28
PACSIN3-204ENST00000528201 KIAA0930Q6ICG6 404 aaPredicted RBP23.07■■□□□ 1.28
PACSIN3-204ENST00000528201 AGGF1Q8N302 714 aaeCLIP23.07■■□□□ 1.28
PACSIN3-204ENST00000528201 SLC35F6Q8N357 371 aa23.07■■□□□ 1.28
PACSIN3-204ENST00000528201 FAM136AQ96C01 138 aa23.07■■□□□ 1.28
PACSIN3-204ENST00000528201 NLNQ9BYT8 704 aa23.07■■□□□ 1.28
PACSIN3-204ENST00000528201 KCNF1Q9H3M0 494 aa23.07■■□□□ 1.28
PACSIN3-204ENST00000528201 GALPQ9UBC7 116 aa23.07■■□□□ 1.28
PACSIN3-204ENST00000528201 TCFL5Q9UL49 500 aa23.07■■□□□ 1.28
PACSIN3-204ENST00000528201 UBR5O95071 2799 aaPredicted RBP23.06■■□□□ 1.28
PACSIN3-204ENST00000528201 OR2B3O76000 313 aa23.06■■□□□ 1.28
PACSIN3-204ENST00000528201 CBSLP0DN79 551 aa23.06■■□□□ 1.28
PACSIN3-204ENST00000528201 MAGP20916 626 aa23.06■■□□□ 1.28
PACSIN3-204ENST00000528201 CBSP35520 551 aa23.06■■□□□ 1.28
PACSIN3-204ENST00000528201 BDKRB1P46663 353 aa23.06■■□□□ 1.28
PACSIN3-204ENST00000528201 MRNIPQ6NTE8 343 aa23.06■■□□□ 1.28
PACSIN3-204ENST00000528201 CENPUQ71F23 418 aa23.06■■□□□ 1.28
PACSIN3-204ENST00000528201 PANX3Q96QZ0 392 aa23.06■■□□□ 1.28
PACSIN3-204ENST00000528201 TSR3Q9UJK0 312 aaKnown RBP23.06■■□□□ 1.28
PACSIN3-204ENST00000528201 MKRN2OSH3BPM6 223 aa23.05■■□□□ 1.28
PACSIN3-204ENST00000528201 GOLGA8MH3BSY2 632 aa23.05■■□□□ 1.28
PACSIN3-204ENST00000528201 RASGRF2O14827 1237 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms